RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 ASTN2O75129 1339 aaPredicted RBP12.87□□□□□ -0.35
COMMD1-202ENST00000427417 WDR33Q9C0J8 1336 aaKnown RBP12.87□□□□□ -0.35
COMMD1-202ENST00000427417 ECE1P42892 770 aa12.86□□□□□ -0.35
COMMD1-202ENST00000427417 LMBR1LQ6UX01 489 aa12.86□□□□□ -0.35
COMMD1-202ENST00000427417 USP48Q86UV5 1035 aa12.86□□□□□ -0.35
COMMD1-202ENST00000427417 MRPL50Q8N5N7 158 aaKnown RBP12.86□□□□□ -0.35
COMMD1-202ENST00000427417 PSME4Q14997 1843 aa12.85□□□□□ -0.35
COMMD1-202ENST00000427417 ADM5C9JUS6 153 aa12.85□□□□□ -0.35
COMMD1-202ENST00000427417 CHRNDQ07001 517 aa12.85□□□□□ -0.35
COMMD1-202ENST00000427417 KIF4BQ2VIQ3 1234 aa12.85□□□□□ -0.35
COMMD1-202ENST00000427417 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
COMMD1-202ENST00000427417 DCPSQ96C86 337 aaKnown RBP12.85□□□□□ -0.35
COMMD1-202ENST00000427417 CAPNS2Q96L46 248 aa12.85□□□□□ -0.35
COMMD1-202ENST00000427417 TLL2Q9Y6L7 1015 aa12.85□□□□□ -0.35
COMMD1-202ENST00000427417 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
COMMD1-202ENST00000427417 CT47B1P0C2W7 299 aaPredicted RBP12.84□□□□□ -0.35
COMMD1-202ENST00000427417 USP17L8P0C7I0 530 aa12.84□□□□□ -0.35
COMMD1-202ENST00000427417 KLRK1P26718 216 aa12.84□□□□□ -0.35
COMMD1-202ENST00000427417 MMP14P50281 582 aa12.84□□□□□ -0.35
COMMD1-202ENST00000427417 ZNF280AP59817 542 aaPredicted RBP12.84□□□□□ -0.35
COMMD1-202ENST00000427417 STRIP1Q5VSL9 837 aa12.84□□□□□ -0.35
COMMD1-202ENST00000427417 KRT26Q7Z3Y9 468 aa12.84□□□□□ -0.35
COMMD1-202ENST00000427417 SSH1Q8WYL5 1049 aa12.84□□□□□ -0.35
COMMD1-202ENST00000427417 AIDAQ96BJ3 306 aa12.84□□□□□ -0.35
COMMD1-202ENST00000427417 MXD3Q9BW11 206 aa12.84□□□□□ -0.35
COMMD1-202ENST00000427417 WBP1LQ9NX94 342 aa12.84□□□□□ -0.35
COMMD1-202ENST00000427417 THSD7BQ9C0I4 1608 aa12.84□□□□□ -0.35
COMMD1-202ENST00000427417 AOC2O75106 756 aa12.83□□□□□ -0.36
COMMD1-202ENST00000427417 MAP2K1Q02750 393 aaPredicted RBP12.83□□□□□ -0.36
COMMD1-202ENST00000427417 LDHAL6AQ6ZMR3 332 aa12.83□□□□□ -0.36
COMMD1-202ENST00000427417 SAPCD2Q86UD0 394 aa12.83□□□□□ -0.36
COMMD1-202ENST00000427417 TXNRD3Q86VQ6 643 aa12.83□□□□□ -0.36
COMMD1-202ENST00000427417 SULF1Q8IWU6 871 aa12.83□□□□□ -0.36
COMMD1-202ENST00000427417 TRMT2AQ8IZ69 625 aaKnown RBP12.83□□□□□ -0.36
COMMD1-202ENST00000427417 OGFOD1Q8N543 542 aa12.83□□□□□ -0.36
COMMD1-202ENST00000427417 FBXW7Q969H0 707 aa12.83□□□□□ -0.36
COMMD1-202ENST00000427417 CDCA7LQ96GN5 454 aa12.83□□□□□ -0.36
COMMD1-202ENST00000427417 HHIPL1Q96JK4 782 aa12.83□□□□□ -0.36
COMMD1-202ENST00000427417 GMLQ99445 158 aa12.83□□□□□ -0.36
COMMD1-202ENST00000427417 CNNM1Q9NRU3 951 aa12.83□□□□□ -0.36
COMMD1-202ENST00000427417 UTYO14607 1347 aa12.83□□□□□ -0.36
COMMD1-202ENST00000427417 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.36
COMMD1-202ENST00000427417 SNAP23O00161 211 aa12.82□□□□□ -0.36
COMMD1-202ENST00000427417 LBX1P52954 281 aa12.82□□□□□ -0.36
COMMD1-202ENST00000427417 EPHA10Q5JZY3 1008 aa12.82□□□□□ -0.36
COMMD1-202ENST00000427417 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
COMMD1-202ENST00000427417 C15orf52Q6ZUT6 534 aaKnown RBP12.82□□□□□ -0.36
COMMD1-202ENST00000427417 MYOZ2Q9NPC6 264 aa12.82□□□□□ -0.36
COMMD1-202ENST00000427417 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
COMMD1-202ENST00000427417 GGA3Q9NZ52 723 aa12.82□□□□□ -0.36
COMMD1-202ENST00000427417 SCAF8Q9UPN6 1271 aaKnown RBP12.82□□□□□ -0.36
COMMD1-202ENST00000427417 TAF5LO75529 589 aa12.81□□□□□ -0.36
COMMD1-202ENST00000427417 NBPF7P0C2Y1 421 aaPredicted RBP12.81□□□□□ -0.36
COMMD1-202ENST00000427417 HSPA8P11142 646 aaKnown RBP12.81□□□□□ -0.36
COMMD1-202ENST00000427417 CTCFP49711 727 aaPredicted RBP12.81□□□□□ -0.36
COMMD1-202ENST00000427417 SCARF1Q14162 830 aa12.81□□□□□ -0.36
COMMD1-202ENST00000427417 TTLL5Q6EMB2 1281 aa12.81□□□□□ -0.36
COMMD1-202ENST00000427417 SUCLG2Q96I99 432 aa12.81□□□□□ -0.36
COMMD1-202ENST00000427417 TSKSQ9UJT2 592 aa12.81□□□□□ -0.36
COMMD1-202ENST00000427417 HDAC9Q9UKV0 1011 aa12.81□□□□□ -0.36
COMMD1-202ENST00000427417 A0A1B0GUL6 1792 aa12.81□□□□□ -0.36
COMMD1-202ENST00000427417 MAP2K2P36507 400 aa12.8□□□□□ -0.36
COMMD1-202ENST00000427417 RABL6Q3YEC7 729 aaPredicted RBP12.8□□□□□ -0.36
COMMD1-202ENST00000427417 ZNF804AQ7Z570 1209 aa12.8□□□□□ -0.36
COMMD1-202ENST00000427417 C2orf69Q8N8R5 385 aa12.8□□□□□ -0.36
COMMD1-202ENST00000427417 HELBQ8NG08 1087 aaPredicted RBP12.8□□□□□ -0.36
COMMD1-202ENST00000427417 ZNF594Q96JF6 807 aaPredicted RBP12.8□□□□□ -0.36
COMMD1-202ENST00000427417 ZIC5Q96T25 663 aa12.8□□□□□ -0.36
COMMD1-202ENST00000427417 BEGAINQ9BUH8 593 aa12.8□□□□□ -0.36
COMMD1-202ENST00000427417 CD209Q9NNX6 404 aa12.8□□□□□ -0.36
COMMD1-202ENST00000427417 PITPNM2Q9BZ72 1349 aa12.8□□□□□ -0.36
COMMD1-202ENST00000427417 PLIN1O60240 522 aa12.79□□□□□ -0.36
COMMD1-202ENST00000427417 HUNKP57058 714 aa12.79□□□□□ -0.36
COMMD1-202ENST00000427417 GTF2IP78347 998 aa12.79□□□□□ -0.36
COMMD1-202ENST00000427417 ANGEL2Q5VTE6 544 aaKnown RBP12.79□□□□□ -0.36
COMMD1-202ENST00000427417 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
COMMD1-202ENST00000427417 BICC1Q9H694 974 aaKnown RBP12.79□□□□□ -0.36
COMMD1-202ENST00000427417 IL1R1P14778 569 aa12.78□□□□□ -0.36
COMMD1-202ENST00000427417 UBE4AQ14139 1066 aa12.78□□□□□ -0.36
COMMD1-202ENST00000427417 API5Q9BZZ5 524 aaKnown RBP12.78□□□□□ -0.36
COMMD1-202ENST00000427417 GBA2Q9HCG7 927 aaPredicted RBP12.78□□□□□ -0.36
COMMD1-202ENST00000427417 PRDM10Q9NQV6 1147 aa12.78□□□□□ -0.36
COMMD1-202ENST00000427417 HDAC5Q9UQL6 1122 aa12.78□□□□□ -0.36
COMMD1-202ENST00000427417 MROH5Q6ZUA9 1318 aa12.78□□□□□ -0.36
COMMD1-202ENST00000427417 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.37
COMMD1-202ENST00000427417 FKBP1AP62942 108 aaKnown RBP12.77□□□□□ -0.37
COMMD1-202ENST00000427417 NBPF9Q3BBW0 867 aa12.77□□□□□ -0.37
COMMD1-202ENST00000427417 CDCA5Q96FF9 252 aa12.77□□□□□ -0.37
COMMD1-202ENST00000427417 USP44Q9H0E7 712 aa12.77□□□□□ -0.37
COMMD1-202ENST00000427417 IRS2Q9Y4H2 1338 aa12.77□□□□□ -0.37
COMMD1-202ENST00000427417 WNT10BO00744 389 aa12.76□□□□□ -0.37
COMMD1-202ENST00000427417 SASH1O94885 1247 aa12.76□□□□□ -0.37
COMMD1-202ENST00000427417 NOGQ13253 232 aa12.76□□□□□ -0.37
COMMD1-202ENST00000427417 PRAMEF18Q5VWM3 479 aa12.76□□□□□ -0.37
COMMD1-202ENST00000427417 DIEXFQ68CQ4 756 aaKnown RBP12.76□□□□□ -0.37
COMMD1-202ENST00000427417 RGMBQ6NW40 437 aa12.76□□□□□ -0.37
COMMD1-202ENST00000427417 KIAA0825Q8IV33 1275 aa12.76□□□□□ -0.37
COMMD1-202ENST00000427417 ANKRD44Q8N8A2 993 aa12.76□□□□□ -0.37
COMMD1-202ENST00000427417 NOB1Q9ULX3 412 aaKnown RBP12.76□□□□□ -0.37
COMMD1-202ENST00000427417 JAG2Q9Y219 1238 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms