RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 EDEM1Q92611 657 aa9.89□□□□□ -0.83
C9orf3-205ENST00000427193 GTF3C3Q9Y5Q9 886 aa9.89□□□□□ -0.83
C9orf3-205ENST00000427193 KIF21AQ7Z4S6 1674 aa9.89□□□□□ -0.83
C9orf3-205ENST00000427193 FAM177BA6PVY3 158 aa9.88□□□□□ -0.83
C9orf3-205ENST00000427193 CD68P34810 354 aaPredicted RBP9.88□□□□□ -0.83
C9orf3-205ENST00000427193 FAM117BQ6P1L5 589 aa9.88□□□□□ -0.83
C9orf3-205ENST00000427193 CCDC82Q8N4S0 544 aa9.88□□□□□ -0.83
C9orf3-205ENST00000427193 RNF112Q9ULX5 631 aa9.88□□□□□ -0.83
C9orf3-205ENST00000427193 MRC2Q9UBG0 1479 aa9.87□□□□□ -0.83
C9orf3-205ENST00000427193 TMEM88BA6NKF7 163 aa9.87□□□□□ -0.83
C9orf3-205ENST00000427193 PTPRAP18433 802 aa9.87□□□□□ -0.83
C9orf3-205ENST00000427193 TXNDC11Q6PKC3 985 aa9.87□□□□□ -0.83
C9orf3-205ENST00000427193 NBPF11Q86T75 865 aa9.87□□□□□ -0.83
C9orf3-205ENST00000427193 KLHL23Q8NBE8 558 aa9.87□□□□□ -0.83
C9orf3-205ENST00000427193 TTC16Q8NEE8 873 aa9.87□□□□□ -0.83
C9orf3-205ENST00000427193 ADAM19Q9H013 955 aa9.87□□□□□ -0.83
C9orf3-205ENST00000427193 CNTN3Q9P232 1028 aa9.87□□□□□ -0.83
C9orf3-205ENST00000427193 FSCN2O14926 492 aa9.86□□□□□ -0.83
C9orf3-205ENST00000427193 PDGFAP04085 211 aa9.86□□□□□ -0.83
C9orf3-205ENST00000427193 GLB1P16278 677 aa9.86□□□□□ -0.83
C9orf3-205ENST00000427193 SSFA2P28290 1259 aa9.86□□□□□ -0.83
C9orf3-205ENST00000427193 MZF1P28698 734 aaPredicted RBP9.86□□□□□ -0.83
C9orf3-205ENST00000427193 DNM1Q05193 864 aaKnown RBP9.86□□□□□ -0.83
C9orf3-205ENST00000427193 AGGF1Q8N302 714 aaeCLIP9.86□□□□□ -0.83
C9orf3-205ENST00000427193 GTF3C2Q8WUA4 911 aaPredicted RBP9.86□□□□□ -0.83
C9orf3-205ENST00000427193 KANSL3Q9P2N6 904 aa9.86□□□□□ -0.83
C9orf3-205ENST00000427193 SALL4Q9UJQ4 1053 aa9.86□□□□□ -0.83
C9orf3-205ENST00000427193 WDR62O43379 1518 aa9.86□□□□□ -0.83
C9orf3-205ENST00000427193 BAZ1BQ9UIG0 1483 aaKnown RBP9.85□□□□□ -0.83
C9orf3-205ENST00000427193 TM4SF5O14894 197 aa9.85□□□□□ -0.83
C9orf3-205ENST00000427193 CES1P23141 567 aa9.85□□□□□ -0.83
C9orf3-205ENST00000427193 MPSTP25325 297 aa9.85□□□□□ -0.83
C9orf3-205ENST00000427193 EIF1AXP47813 144 aaKnown RBP9.85□□□□□ -0.83
C9orf3-205ENST00000427193 ALKBH2Q6NS38 261 aa9.85□□□□□ -0.83
C9orf3-205ENST00000427193 ADAMTSL4Q6UY14 1074 aa9.85□□□□□ -0.83
C9orf3-205ENST00000427193 PMEPA1Q969W9 287 aa9.85□□□□□ -0.83
C9orf3-205ENST00000427193 POP1Q99575 1024 aaKnown RBP9.85□□□□□ -0.83
C9orf3-205ENST00000427193 HYAL3O43820 417 aaPredicted RBP9.84□□□□□ -0.83
C9orf3-205ENST00000427193 FSTP19883 344 aa9.84□□□□□ -0.83
C9orf3-205ENST00000427193 EPHA1P21709 976 aa9.84□□□□□ -0.83
C9orf3-205ENST00000427193 ACAD11Q709F0 780 aa9.84□□□□□ -0.83
C9orf3-205ENST00000427193 C1orf127Q8N9H9 656 aa9.84□□□□□ -0.83
C9orf3-205ENST00000427193 CEP41Q9BYV8 373 aa9.84□□□□□ -0.83
C9orf3-205ENST00000427193 GGNBP2Q9H3C7 697 aa9.84□□□□□ -0.83
C9orf3-205ENST00000427193 RIMBP3CA6NJZ7 1639 aa9.84□□□□□ -0.83
C9orf3-205ENST00000427193 RIMBP3BA6NNM3 1639 aa9.84□□□□□ -0.83
C9orf3-205ENST00000427193 RIMBP3Q9UFD9 1639 aa9.84□□□□□ -0.83
C9orf3-205ENST00000427193 WISP1O95388 367 aa9.83□□□□□ -0.84
C9orf3-205ENST00000427193 CDC25BP30305 580 aa9.83□□□□□ -0.84
C9orf3-205ENST00000427193 CABP4P57796 275 aa9.83□□□□□ -0.84
C9orf3-205ENST00000427193 C8orf34Q49A92 452 aa9.83□□□□□ -0.84
C9orf3-205ENST00000427193 WNT8BQ93098 351 aa9.83□□□□□ -0.84
C9orf3-205ENST00000427193 CARD10Q9BWT7 1032 aa9.83□□□□□ -0.84
C9orf3-205ENST00000427193 SEC31BQ9NQW1 1179 aa9.83□□□□□ -0.84
C9orf3-205ENST00000427193 SH2B1Q9NRF2 756 aaPredicted RBP9.83□□□□□ -0.84
C9orf3-205ENST00000427193 KCNK4Q9NYG8 393 aa9.83□□□□□ -0.84
C9orf3-205ENST00000427193 H3BRJ5 948 aa9.82□□□□□ -0.84
C9orf3-205ENST00000427193 NPR3P17342 541 aa9.82□□□□□ -0.84
C9orf3-205ENST00000427193 UVSSAQ2YD98 709 aa9.82□□□□□ -0.84
C9orf3-205ENST00000427193 UBL7Q96S82 380 aaPredicted RBP9.82□□□□□ -0.84
C9orf3-205ENST00000427193 DZANK1Q9NVP4 752 aa9.82□□□□□ -0.84
C9orf3-205ENST00000427193 MTMR7Q9Y216 660 aa9.82□□□□□ -0.84
C9orf3-205ENST00000427193 RAXQ9Y2V3 346 aa9.82□□□□□ -0.84
C9orf3-205ENST00000427193 ARHGEF11O15085 1522 aa9.82□□□□□ -0.84
C9orf3-205ENST00000427193 CADPSQ9ULU8 1353 aa9.81□□□□□ -0.84
C9orf3-205ENST00000427193 GSC2O15499 205 aa9.81□□□□□ -0.84
C9orf3-205ENST00000427193 PIP4K2BP78356 416 aa9.81□□□□□ -0.84
C9orf3-205ENST00000427193 DUOXA2Q1HG44 320 aa9.81□□□□□ -0.84
C9orf3-205ENST00000427193 SMARCA4P51532 1647 aa9.81□□□□□ -0.84
C9orf3-205ENST00000427193 A6NHS1 94 aa9.8□□□□□ -0.84
C9orf3-205ENST00000427193 NFKBIEO00221 500 aa9.8□□□□□ -0.84
C9orf3-205ENST00000427193 KRTAP4-8Q9BYQ9 185 aa9.8□□□□□ -0.84
C9orf3-205ENST00000427193 CHRDQ9H2X0 955 aa9.8□□□□□ -0.84
C9orf3-205ENST00000427193 OSGEPQ9NPF4 335 aa9.8□□□□□ -0.84
C9orf3-205ENST00000427193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.8□□□□□ -0.84
C9orf3-205ENST00000427193 PDE2AO00408 941 aaPredicted RBP9.79□□□□□ -0.84
C9orf3-205ENST00000427193 DHX15O43143 795 aaKnown RBP9.79□□□□□ -0.84
C9orf3-205ENST00000427193 FAM13AO94988 1023 aa9.79□□□□□ -0.84
C9orf3-205ENST00000427193 ACPPP15309 386 aa9.79□□□□□ -0.84
C9orf3-205ENST00000427193 EHHADHQ08426 723 aa9.79□□□□□ -0.84
C9orf3-205ENST00000427193 MTMR3Q13615 1198 aa9.79□□□□□ -0.84
C9orf3-205ENST00000427193 CYB5RLQ6IPT4 315 aa9.79□□□□□ -0.84
C9orf3-205ENST00000427193 KIAA1211Q6ZU35 1233 aa9.79□□□□□ -0.84
C9orf3-205ENST00000427193 FOXD4L4Q8WXT5 416 aaPredicted RBP9.79□□□□□ -0.84
C9orf3-205ENST00000427193 KLHDC7BQ96G42 594 aa9.79□□□□□ -0.84
C9orf3-205ENST00000427193 PSMG3-AS1Q96PY0 264 aa9.79□□□□□ -0.84
C9orf3-205ENST00000427193 POLIQ9UNA4 740 aa9.79□□□□□ -0.84
C9orf3-205ENST00000427193 ADAM11O75078 769 aa9.78□□□□□ -0.84
C9orf3-205ENST00000427193 USP5P45974 858 aa9.78□□□□□ -0.84
C9orf3-205ENST00000427193 SF3B2Q13435 895 aaKnown RBP9.78□□□□□ -0.84
C9orf3-205ENST00000427193 ARMC10Q8N2F6 343 aa9.78□□□□□ -0.84
C9orf3-205ENST00000427193 TMEM102Q8N9M5 508 aaPredicted RBP9.78□□□□□ -0.84
C9orf3-205ENST00000427193 STOML1Q9UBI4 398 aa9.78□□□□□ -0.84
C9orf3-205ENST00000427193 PEG3Q9GZU2 1588 aa9.78□□□□□ -0.84
C9orf3-205ENST00000427193 AAMPQ13685 434 aa9.77□□□□□ -0.85
C9orf3-205ENST00000427193 SNX29Q8TEQ0 813 aa9.77□□□□□ -0.85
C9orf3-205ENST00000427193 UTP4Q969X6 686 aaKnown RBP9.77□□□□□ -0.85
C9orf3-205ENST00000427193 FAM46AQ96IP4 442 aaKnown RBP9.77□□□□□ -0.85
C9orf3-205ENST00000427193 DDX3YO15523 660 aaKnown RBP9.76□□□□□ -0.85
C9orf3-205ENST00000427193 TNFRSF21O75509 655 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms