RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 DEFB115Q30KQ5 88 aa13.55□□□□□ -0.24
LINC01238-202ENST00000426962 RABL6Q3YEC7 729 aaPredicted RBP13.55□□□□□ -0.24
LINC01238-202ENST00000426962 STRIP1Q5VSL9 837 aa13.55□□□□□ -0.24
LINC01238-202ENST00000426962 CST9Q5W186 159 aa13.55□□□□□ -0.24
LINC01238-202ENST00000426962 C15orf52Q6ZUT6 534 aaKnown RBP13.55□□□□□ -0.24
LINC01238-202ENST00000426962 GMLQ99445 158 aa13.55□□□□□ -0.24
LINC01238-202ENST00000426962 GLIS2Q9BZE0 524 aaPredicted RBP13.55□□□□□ -0.24
LINC01238-202ENST00000426962 BICC1Q9H694 974 aaKnown RBP13.55□□□□□ -0.24
LINC01238-202ENST00000426962 CNTNAP1P78357 1384 aa13.55□□□□□ -0.24
LINC01238-202ENST00000426962 RASSF10A6NK89 507 aa13.54□□□□□ -0.24
LINC01238-202ENST00000426962 SNAP23O00161 211 aa13.54□□□□□ -0.24
LINC01238-202ENST00000426962 PLIN1O60240 522 aa13.54□□□□□ -0.24
LINC01238-202ENST00000426962 EGFRP00533 1210 aa13.54□□□□□ -0.24
LINC01238-202ENST00000426962 USP17L8P0C7I0 530 aa13.54□□□□□ -0.24
LINC01238-202ENST00000426962 KIF4BQ2VIQ3 1234 aa13.54□□□□□ -0.24
LINC01238-202ENST00000426962 DACT2Q5SW24 774 aa13.54□□□□□ -0.24
LINC01238-202ENST00000426962 TTLL5Q6EMB2 1281 aa13.54□□□□□ -0.24
LINC01238-202ENST00000426962 DCPSQ96C86 337 aaKnown RBP13.54□□□□□ -0.24
LINC01238-202ENST00000426962 API5Q9BZZ5 524 aaKnown RBP13.54□□□□□ -0.24
LINC01238-202ENST00000426962 CD209Q9NNX6 404 aa13.54□□□□□ -0.24
LINC01238-202ENST00000426962 ABT1Q9ULW3 272 aaKnown RBP13.54□□□□□ -0.24
LINC01238-202ENST00000426962 CELF2O95319 508 aaKnown RBP13.53□□□□□ -0.24
LINC01238-202ENST00000426962 KLRK1P26718 216 aa13.53□□□□□ -0.24
LINC01238-202ENST00000426962 MMP14P50281 582 aa13.53□□□□□ -0.24
LINC01238-202ENST00000426962 HNRNPUQ00839 825 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC01238-202ENST00000426962 USP48Q86UV5 1035 aa13.53□□□□□ -0.24
LINC01238-202ENST00000426962 ARHGAP45Q92619 1136 aa13.53□□□□□ -0.24
LINC01238-202ENST00000426962 FBXW7Q969H0 707 aa13.53□□□□□ -0.24
LINC01238-202ENST00000426962 RIPOR2Q9Y4F9 1068 aa13.53□□□□□ -0.24
LINC01238-202ENST00000426962 MYO3BQ8WXR4 1341 aa13.53□□□□□ -0.24
LINC01238-202ENST00000426962 ZNF609O15014 1411 aa13.53□□□□□ -0.24
LINC01238-202ENST00000426962 SCN9AQ15858 1988 aa13.52□□□□□ -0.24
LINC01238-202ENST00000426962 VEGFBP49765 207 aa13.52□□□□□ -0.25
LINC01238-202ENST00000426962 GTF2IP78347 998 aa13.52□□□□□ -0.25
LINC01238-202ENST00000426962 UBE4AQ14139 1066 aa13.52□□□□□ -0.25
LINC01238-202ENST00000426962 OGFOD1Q8N543 542 aa13.52□□□□□ -0.25
LINC01238-202ENST00000426962 ANKRD44Q8N8A2 993 aa13.52□□□□□ -0.25
LINC01238-202ENST00000426962 PUS3Q9BZE2 481 aaKnown RBP13.52□□□□□ -0.25
LINC01238-202ENST00000426962 MYOZ2Q9NPC6 264 aa13.52□□□□□ -0.25
LINC01238-202ENST00000426962 IRS2Q9Y4H2 1338 aa13.52□□□□□ -0.25
LINC01238-202ENST00000426962 SPEF2Q9C093 1822 aa13.51□□□□□ -0.25
LINC01238-202ENST00000426962 MROH5Q6ZUA9 1318 aa13.51□□□□□ -0.25
LINC01238-202ENST00000426962 KIF16BQ96L93 1317 aa13.51□□□□□ -0.25
LINC01238-202ENST00000426962 SCARF1Q14162 830 aa13.51□□□□□ -0.25
LINC01238-202ENST00000426962 KRT26Q7Z3Y9 468 aa13.51□□□□□ -0.25
LINC01238-202ENST00000426962 ZNF804AQ7Z570 1209 aa13.51□□□□□ -0.25
LINC01238-202ENST00000426962 MXD3Q9BW11 206 aa13.51□□□□□ -0.25
LINC01238-202ENST00000426962 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
LINC01238-202ENST00000426962 TLL2Q9Y6L7 1015 aa13.51□□□□□ -0.25
LINC01238-202ENST00000426962 WDR33Q9C0J8 1336 aaKnown RBP13.5□□□□□ -0.25
LINC01238-202ENST00000426962 IPO8O15397 1037 aaKnown RBP13.5□□□□□ -0.25
LINC01238-202ENST00000426962 HSPA1AP0DMV8 641 aaKnown RBP13.5□□□□□ -0.25
LINC01238-202ENST00000426962 HSPA1BP0DMV9 641 aaKnown RBP13.5□□□□□ -0.25
LINC01238-202ENST00000426962 IL1R1P14778 569 aa13.5□□□□□ -0.25
LINC01238-202ENST00000426962 SAPCD2Q86UD0 394 aa13.5□□□□□ -0.25
LINC01238-202ENST00000426962 SULF1Q8IWU6 871 aa13.5□□□□□ -0.25
LINC01238-202ENST00000426962 ZNF408Q9H9D4 720 aa13.5□□□□□ -0.25
LINC01238-202ENST00000426962 UBTFL1P0CB47 393 aaPredicted RBP13.49□□□□□ -0.25
LINC01238-202ENST00000426962 ECE1P42892 770 aa13.49□□□□□ -0.25
LINC01238-202ENST00000426962 LRRC24Q50LG9 513 aa13.49□□□□□ -0.25
LINC01238-202ENST00000426962 GGA3Q9NZ52 723 aa13.49□□□□□ -0.25
LINC01238-202ENST00000426962 HDAC9Q9UKV0 1011 aa13.49□□□□□ -0.25
LINC01238-202ENST00000426962 PCNTO95613 3336 aa13.49□□□□□ -0.25
LINC01238-202ENST00000426962 ASTN2O75129 1339 aaPredicted RBP13.48□□□□□ -0.25
LINC01238-202ENST00000426962 BCAR3O75815 825 aa13.48□□□□□ -0.25
LINC01238-202ENST00000426962 SASH1O94885 1247 aa13.48□□□□□ -0.25
LINC01238-202ENST00000426962 HIBADHP31937 336 aaKnown RBP13.48□□□□□ -0.25
LINC01238-202ENST00000426962 METTL24Q5JXM2 366 aa13.48□□□□□ -0.25
LINC01238-202ENST00000426962 ANGEL2Q5VTE6 544 aaKnown RBP13.48□□□□□ -0.25
LINC01238-202ENST00000426962 INTS3Q68E01 1043 aaKnown RBP13.48□□□□□ -0.25
LINC01238-202ENST00000426962 DLK2Q6UY11 383 aa13.48□□□□□ -0.25
LINC01238-202ENST00000426962 HHIPL1Q96JK4 782 aa13.48□□□□□ -0.25
LINC01238-202ENST00000426962 FAM84BQ96KN1 310 aaPredicted RBP13.48□□□□□ -0.25
LINC01238-202ENST00000426962 PITPNM2Q9BZ72 1349 aa13.47□□□□□ -0.25
LINC01238-202ENST00000426962 ADM5C9JUS6 153 aa13.47□□□□□ -0.25
LINC01238-202ENST00000426962 WNT10BO00744 389 aa13.47□□□□□ -0.25
LINC01238-202ENST00000426962 PDE8BO95263 885 aa13.47□□□□□ -0.25
LINC01238-202ENST00000426962 RFX5P48382 616 aaPredicted RBP13.47□□□□□ -0.25
LINC01238-202ENST00000426962 FKBP1AP62942 108 aaKnown RBP13.47□□□□□ -0.25
LINC01238-202ENST00000426962 NBPF9Q3BBW0 867 aa13.47□□□□□ -0.25
LINC01238-202ENST00000426962 CYP4F22Q6NT55 531 aa13.47□□□□□ -0.25
LINC01238-202ENST00000426962 PAXIP1Q6ZW49 1069 aaPredicted RBP13.47□□□□□ -0.25
LINC01238-202ENST00000426962 KIAA0825Q8IV33 1275 aa13.47□□□□□ -0.25
LINC01238-202ENST00000426962 TDRD7Q8NHU6 1098 aaKnown RBP13.47□□□□□ -0.25
LINC01238-202ENST00000426962 KLHDC4Q8TBB5 520 aa13.47□□□□□ -0.25
LINC01238-202ENST00000426962 CAPNS2Q96L46 248 aa13.47□□□□□ -0.25
LINC01238-202ENST00000426962 PSME4Q14997 1843 aa13.46□□□□□ -0.25
LINC01238-202ENST00000426962 GYG1P46976 350 aa13.46□□□□□ -0.25
LINC01238-202ENST00000426962 MAP2K1Q02750 393 aaPredicted RBP13.46□□□□□ -0.25
LINC01238-202ENST00000426962 PTPN12Q05209 780 aaKnown RBP13.46□□□□□ -0.25
LINC01238-202ENST00000426962 ATF7IPQ6VMQ6 1270 aa13.46□□□□□ -0.25
LINC01238-202ENST00000426962 FBXO33Q7Z6M2 555 aa13.46□□□□□ -0.25
LINC01238-202ENST00000426962 C2orf69Q8N8R5 385 aa13.46□□□□□ -0.25
LINC01238-202ENST00000426962 FRAT1Q92837 279 aaPredicted RBP13.46□□□□□ -0.25
LINC01238-202ENST00000426962 GBA2Q9HCG7 927 aaPredicted RBP13.46□□□□□ -0.25
LINC01238-202ENST00000426962 TRPM7Q96QT4 1865 aa13.46□□□□□ -0.26
LINC01238-202ENST00000426962 EYA2O00167 538 aa13.45□□□□□ -0.26
LINC01238-202ENST00000426962 GNAI3P08754 354 aa13.45□□□□□ -0.26
LINC01238-202ENST00000426962 TRIM27P14373 513 aa13.45□□□□□ -0.26
LINC01238-202ENST00000426962 CAVIN4Q5BKX8 364 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms