RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 CNOT7Q9UIV1 285 aaKnown RBP21.56■■□□□ 1.04
LMCD1-204ENST00000426878 ZBTB12Q9Y330 459 aaPredicted RBP21.56■■□□□ 1.04
LMCD1-204ENST00000426878 LRRFIP2Q9Y608 721 aaKnown RBP21.56■■□□□ 1.04
LMCD1-204ENST00000426878 USP17L3A6NCW0 530 aa21.55■■□□□ 1.04
LMCD1-204ENST00000426878 USP17L4A6NCW7 530 aa21.55■■□□□ 1.04
LMCD1-204ENST00000426878 SNAP23O00161 211 aa21.55■■□□□ 1.04
LMCD1-204ENST00000426878 UBE4AQ14139 1066 aa21.55■■□□□ 1.04
LMCD1-204ENST00000426878 USP17L1Q7RTZ2 530 aa21.55■■□□□ 1.04
LMCD1-204ENST00000426878 H7C1D1 291 aa21.55■■□□□ 1.04
LMCD1-204ENST00000426878 PTPN12Q05209 780 aaKnown RBP21.55■■□□□ 1.04
LMCD1-204ENST00000426878 RSBN1LQ6PCB5 846 aaPredicted RBP21.55■■□□□ 1.04
LMCD1-204ENST00000426878 TMEM57Q8N5G2 664 aa21.55■■□□□ 1.04
LMCD1-204ENST00000426878 AGBL3Q8NEM8 1001 aa21.55■■□□□ 1.04
LMCD1-204ENST00000426878 FBXO3Q9UK99 471 aa21.55■■□□□ 1.04
LMCD1-204ENST00000426878 PLIN1O60240 522 aa21.54■■□□□ 1.04
LMCD1-204ENST00000426878 LRRC24Q50LG9 513 aa21.54■■□□□ 1.04
LMCD1-204ENST00000426878 STRIP1Q5VSL9 837 aa21.54■■□□□ 1.04
LMCD1-204ENST00000426878 DZIP1LQ8IYY4 767 aaKnown RBP21.54■■□□□ 1.04
LMCD1-204ENST00000426878 GMLQ99445 158 aa21.54■■□□□ 1.04
LMCD1-204ENST00000426878 CLEC11AQ9Y240 323 aa21.54■■□□□ 1.04
LMCD1-204ENST00000426878 ITGBL1O95965 494 aaPredicted RBP21.53■■□□□ 1.04
LMCD1-204ENST00000426878 MTX1Q13505 466 aa21.53■■□□□ 1.04
LMCD1-204ENST00000426878 MICALL2Q8IY33 904 aa21.53■■□□□ 1.04
LMCD1-204ENST00000426878 VGLL2Q8N8G2 317 aa21.53■■□□□ 1.04
LMCD1-204ENST00000426878 KLHDC4Q8TBB5 520 aa21.53■■□□□ 1.04
LMCD1-204ENST00000426878 CD209Q9NNX6 404 aa21.53■■□□□ 1.04
LMCD1-204ENST00000426878 EYA2O00167 538 aa21.52■■□□□ 1.04
LMCD1-204ENST00000426878 FTSJ3Q8IY81 847 aaKnown RBP21.52■■□□□ 1.04
LMCD1-204ENST00000426878 ZC3H15Q8WU90 426 aaKnown RBP21.52■■□□□ 1.04
LMCD1-204ENST00000426878 PGAP2Q9UHJ9 254 aa21.52■■□□□ 1.04
LMCD1-204ENST00000426878 PDE8BO95263 885 aa21.51■■□□□ 1.03
LMCD1-204ENST00000426878 GNAI2P04899 355 aa21.51■■□□□ 1.03
LMCD1-204ENST00000426878 IL1R1P14778 569 aa21.51■■□□□ 1.03
LMCD1-204ENST00000426878 METTL24Q5JXM2 366 aa21.51■■□□□ 1.03
LMCD1-204ENST00000426878 DACT2Q5SW24 774 aa21.51■■□□□ 1.03
LMCD1-204ENST00000426878 ZNF804AQ7Z570 1209 aa21.51■■□□□ 1.03
LMCD1-204ENST00000426878 CNTROBQ8N137 903 aa21.51■■□□□ 1.03
LMCD1-204ENST00000426878 PASKQ96RG2 1323 aa21.51■■□□□ 1.03
LMCD1-204ENST00000426878 SHTN1A0MZ66 631 aa21.5■■□□□ 1.03
LMCD1-204ENST00000426878 CIAO1O76071 339 aa21.5■■□□□ 1.03
LMCD1-204ENST00000426878 RLBP1P12271 317 aa21.5■■□□□ 1.03
LMCD1-204ENST00000426878 HIRAP54198 1017 aaPredicted RBP21.5■■□□□ 1.03
LMCD1-204ENST00000426878 COPRSQ9NQ92 184 aa21.5■■□□□ 1.03
LMCD1-204ENST00000426878 RCAN3Q9UKA8 241 aa21.5■■□□□ 1.03
LMCD1-204ENST00000426878 MYO3BQ8WXR4 1341 aa21.5■■□□□ 1.03
LMCD1-204ENST00000426878 ZNF646O15015 1829 aaPredicted RBP21.5■■□□□ 1.03
LMCD1-204ENST00000426878 MS4A1P11836 297 aa21.49■■□□□ 1.03
LMCD1-204ENST00000426878 ZNF280AP59817 542 aaPredicted RBP21.49■■□□□ 1.03
LMCD1-204ENST00000426878 MAP1SQ66K74 1059 aaPredicted RBP21.49■■□□□ 1.03
LMCD1-204ENST00000426878 TTLL5Q6EMB2 1281 aa21.49■■□□□ 1.03
LMCD1-204ENST00000426878 ATG9AQ7Z3C6 839 aa21.49■■□□□ 1.03
LMCD1-204ENST00000426878 TRPM4Q8TD43 1214 aa21.49■■□□□ 1.03
LMCD1-204ENST00000426878 MMP14P50281 582 aa21.48■■□□□ 1.03
LMCD1-204ENST00000426878 USP17L8P0C7I0 530 aa21.47■■□□□ 1.03
LMCD1-204ENST00000426878 SAMD7Q7Z3H4 446 aa21.47■■□□□ 1.03
LMCD1-204ENST00000426878 FAM84BQ96KN1 310 aaPredicted RBP21.47■■□□□ 1.03
LMCD1-204ENST00000426878 ZBTB7BO15156 539 aaPredicted RBP21.46■■□□□ 1.03
LMCD1-204ENST00000426878 SRGAP3O43295 1099 aa21.46■■□□□ 1.03
LMCD1-204ENST00000426878 FGFR2P21802 821 aa21.46■■□□□ 1.03
LMCD1-204ENST00000426878 GTF2IP78347 998 aa21.46■■□□□ 1.03
LMCD1-204ENST00000426878 HIBADHP31937 336 aaKnown RBP21.46■■□□□ 1.03
LMCD1-204ENST00000426878 IL15P40933 162 aaPredicted RBP21.46■■□□□ 1.03
LMCD1-204ENST00000426878 PUM3Q15397 648 aaKnown RBP21.46■■□□□ 1.03
LMCD1-204ENST00000426878 TBC1D10BQ4KMP7 808 aaPredicted RBP21.46■■□□□ 1.03
LMCD1-204ENST00000426878 FBXO33Q7Z6M2 555 aa21.46■■□□□ 1.03
LMCD1-204ENST00000426878 ITPRIPQ8IWB1 547 aa21.46■■□□□ 1.03
LMCD1-204ENST00000426878 DNAJC5GQ8N7S2 189 aa21.46■■□□□ 1.03
LMCD1-204ENST00000426878 TDRD7Q8NHU6 1098 aaKnown RBP21.46■■□□□ 1.03
LMCD1-204ENST00000426878 SASH1O94885 1247 aa21.45■■□□□ 1.02
LMCD1-204ENST00000426878 EGFRP00533 1210 aa21.45■■□□□ 1.02
LMCD1-204ENST00000426878 FKBP1AP62942 108 aaKnown RBP21.45■■□□□ 1.02
LMCD1-204ENST00000426878 SIL1Q9H173 461 aa21.45■■□□□ 1.02
LMCD1-204ENST00000426878 FAM205AQ6ZU69 1335 aa21.44■■□□□ 1.02
LMCD1-204ENST00000426878 GYG1P46976 350 aa21.44■■□□□ 1.02
LMCD1-204ENST00000426878 KIF4BQ2VIQ3 1234 aa21.44■■□□□ 1.02
LMCD1-204ENST00000426878 PANK1Q8TE04 598 aa21.44■■□□□ 1.02
LMCD1-204ENST00000426878 MXD3Q9BW11 206 aa21.44■■□□□ 1.02
LMCD1-204ENST00000426878 CREBZFQ9NS37 354 aa21.44■■□□□ 1.02
LMCD1-204ENST00000426878 CEP126Q9P2H0 1117 aa21.44■■□□□ 1.02
LMCD1-204ENST00000426878 PA2G4Q9UQ80 394 aaKnown RBP21.44■■□□□ 1.02
LMCD1-204ENST00000426878 CAVIN4Q5BKX8 364 aa21.43■■□□□ 1.02
LMCD1-204ENST00000426878 OGFOD1Q8N543 542 aa21.43■■□□□ 1.02
LMCD1-204ENST00000426878 LPIN2Q92539 896 aa21.43■■□□□ 1.02
LMCD1-204ENST00000426878 FBXW7Q969H0 707 aa21.43■■□□□ 1.02
LMCD1-204ENST00000426878 IFIT1P09914 478 aaKnown RBP21.42■■□□□ 1.02
LMCD1-204ENST00000426878 HTRA3P83110 453 aa21.42■■□□□ 1.02
LMCD1-204ENST00000426878 RBM26Q5T8P6 1007 aaKnown RBP21.42■■□□□ 1.02
LMCD1-204ENST00000426878 MYOZ2Q9NPC6 264 aa21.42■■□□□ 1.02
LMCD1-204ENST00000426878 PNMA6EA0A0J9YXQ4 647 aa21.41■■□□□ 1.02
LMCD1-204ENST00000426878 CDC37L1Q7L3B6 337 aa21.41■■□□□ 1.02
LMCD1-204ENST00000426878 CERS5Q8N5B7 392 aa21.41■■□□□ 1.02
LMCD1-204ENST00000426878 TMEM88BA6NKF7 163 aa21.4■■□□□ 1.02
LMCD1-204ENST00000426878 SLC5A1P13866 664 aa21.4■■□□□ 1.02
LMCD1-204ENST00000426878 ATP8B2P98198 1209 aa21.4■■□□□ 1.02
LMCD1-204ENST00000426878 VPS37DQ86XT2 251 aa21.4■■□□□ 1.02
LMCD1-204ENST00000426878 POLA2Q14181 598 aa21.39■■□□□ 1.02
LMCD1-204ENST00000426878 SSH3Q8TE77 659 aa21.39■■□□□ 1.02
LMCD1-204ENST00000426878 MVPQ14764 893 aaKnown RBP21.38■■□□□ 1.01
LMCD1-204ENST00000426878 ATP2B3Q16720 1220 aa21.38■■□□□ 1.01
LMCD1-204ENST00000426878 KIAA0825Q8IV33 1275 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms