RNA–Protein interactions for RNA: ENST00000426687.2

SHANK2-208, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-208ENST00000426687 SYNGAP1Q96PV0 1343 aa11.71□□□□□ -0.53
SHANK2-208ENST00000426687 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.53
SHANK2-208ENST00000426687 PRKG1Q13976 671 aa11.71□□□□□ -0.53
SHANK2-208ENST00000426687 NBPF9Q3BBW0 867 aa11.71□□□□□ -0.53
SHANK2-208ENST00000426687 TDHQ8IZJ6 230 aa11.71□□□□□ -0.53
SHANK2-208ENST00000426687 NSFL1CQ9UNZ2 370 aaKnown RBP11.71□□□□□ -0.53
SHANK2-208ENST00000426687 COL1A1P02452 1464 aaPredicted RBP11.7□□□□□ -0.54
SHANK2-208ENST00000426687 PSME4Q14997 1843 aa11.7□□□□□ -0.54
SHANK2-208ENST00000426687 C6orf229H3BNL8 230 aa11.7□□□□□ -0.54
SHANK2-208ENST00000426687 TNFRSF10AO00220 468 aa11.7□□□□□ -0.54
SHANK2-208ENST00000426687 GIGYF2Q6Y7W6 1299 aaKnown RBP11.7□□□□□ -0.54
SHANK2-208ENST00000426687 TTLL7Q6ZT98 887 aa11.7□□□□□ -0.54
SHANK2-208ENST00000426687 UTP14AQ9BVJ6 771 aaKnown RBP11.7□□□□□ -0.54
SHANK2-208ENST00000426687 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
SHANK2-208ENST00000426687 PRUNE2Q8WUY3 3088 aa11.7□□□□□ -0.54
SHANK2-208ENST00000426687 CLMNQ96JQ2 1002 aa11.69□□□□□ -0.54
SHANK2-208ENST00000426687 SNX27Q96L92 541 aa11.69□□□□□ -0.54
SHANK2-208ENST00000426687 IRS2Q9Y4H2 1338 aa11.68□□□□□ -0.54
SHANK2-208ENST00000426687 POTEB2H3BUK9 544 aa11.68□□□□□ -0.54
SHANK2-208ENST00000426687 WNT10BO00744 389 aa11.68□□□□□ -0.54
SHANK2-208ENST00000426687 CCL5P13501 91 aa11.68□□□□□ -0.54
SHANK2-208ENST00000426687 CAPN2P17655 700 aa11.68□□□□□ -0.54
SHANK2-208ENST00000426687 GJA5P36382 358 aa11.68□□□□□ -0.54
SHANK2-208ENST00000426687 GPSM2P81274 684 aa11.68□□□□□ -0.54
SHANK2-208ENST00000426687 APOBEC3FQ8IUX4 373 aaKnown RBP11.68□□□□□ -0.54
SHANK2-208ENST00000426687 TBC1D16Q8TBP0 767 aa11.68□□□□□ -0.54
SHANK2-208ENST00000426687 U2AF1L4Q8WU68 220 aaKnown RBP11.68□□□□□ -0.54
SHANK2-208ENST00000426687 ZFYVE28Q9HCC9 887 aa11.68□□□□□ -0.54
SHANK2-208ENST00000426687 LACTBP83111 547 aaPredicted RBP11.67□□□□□ -0.54
SHANK2-208ENST00000426687 NGEFQ8N5V2 710 aa11.67□□□□□ -0.54
SHANK2-208ENST00000426687 ZC3H12CQ9C0D7 883 aaKnown RBP11.67□□□□□ -0.54
SHANK2-208ENST00000426687 ARHGAP39Q9C0H5 1083 aa11.67□□□□□ -0.54
SHANK2-208ENST00000426687 COL2A1P02458 1487 aaPredicted RBP11.67□□□□□ -0.54
SHANK2-208ENST00000426687 ZSWIM8A7E2V4 1837 aa11.66□□□□□ -0.54
SHANK2-208ENST00000426687 TMEM265A0A087WTH1 108 aa11.66□□□□□ -0.54
SHANK2-208ENST00000426687 HCLS1P14317 486 aaPredicted RBP11.66□□□□□ -0.54
SHANK2-208ENST00000426687 MAP3K12Q12852 859 aa11.66□□□□□ -0.54
SHANK2-208ENST00000426687 KIF22Q14807 665 aa11.66□□□□□ -0.54
SHANK2-208ENST00000426687 TAF1CQ15572 869 aaPredicted RBP11.66□□□□□ -0.54
SHANK2-208ENST00000426687 MAFAQ8NHW3 353 aaPredicted RBP11.66□□□□□ -0.54
SHANK2-208ENST00000426687 RNF208Q9H0X6 261 aa11.66□□□□□ -0.54
SHANK2-208ENST00000426687 FZD1Q9UP38 647 aa11.66□□□□□ -0.54
SHANK2-208ENST00000426687 ARIH1Q9Y4X5 557 aaPredicted RBP11.66□□□□□ -0.54
SHANK2-208ENST00000426687 PPP1R12BO60237 982 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-208ENST00000426687 GRK4P32298 578 aa11.65□□□□□ -0.54
SHANK2-208ENST00000426687 DDX10Q13206 875 aaKnown RBP11.65□□□□□ -0.54
SHANK2-208ENST00000426687 MS4A4AQ96JQ5 239 aa11.65□□□□□ -0.54
SHANK2-208ENST00000426687 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.54
SHANK2-208ENST00000426687 LAMA2P24043 3122 aaKnown RBP11.64□□□□□ -0.55
SHANK2-208ENST00000426687 SGPL1O95470 568 aa11.64□□□□□ -0.55
SHANK2-208ENST00000426687 MAGEA10P43363 369 aaPredicted RBP11.64□□□□□ -0.55
SHANK2-208ENST00000426687 MMP14P50281 582 aa11.64□□□□□ -0.55
SHANK2-208ENST00000426687 CELF1Q92879 486 aaKnown RBP11.64□□□□□ -0.55
SHANK2-208ENST00000426687 SRRDQ9UH36 339 aa11.64□□□□□ -0.55
SHANK2-208ENST00000426687 RIPOR2Q9Y4F9 1068 aa11.64□□□□□ -0.55
SHANK2-208ENST00000426687 ALPK3Q96L96 1907 aa11.64□□□□□ -0.55
SHANK2-208ENST00000426687 FAM205AQ6ZU69 1335 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 USP17L3A6NCW0 530 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 USP17L4A6NCW7 530 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 G3V3G9 751 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 TLR2O60603 784 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 DIAPH1O60610 1272 aaKnown RBP11.63□□□□□ -0.55
SHANK2-208ENST00000426687 SASH1O94885 1247 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 UBXN2AP68543 259 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 TJAP1Q5JTD0 557 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 DCAF8Q5TAQ9 597 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 USP17L1Q7RTZ2 530 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 OGFOD1Q8N543 542 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 BRI3BPQ8WY22 251 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 PPP2R3BQ9Y5P8 575 aa11.63□□□□□ -0.55
SHANK2-208ENST00000426687 SH3TC1Q8TE82 1336 aa11.62□□□□□ -0.55
SHANK2-208ENST00000426687 PIEZO1Q92508 2521 aa11.62□□□□□ -0.55
SHANK2-208ENST00000426687 COL4A1P02462 1669 aa11.62□□□□□ -0.55
SHANK2-208ENST00000426687 PODNQ7Z5L7 613 aa11.62□□□□□ -0.55
SHANK2-208ENST00000426687 ANKRD13AQ8IZ07 590 aa11.62□□□□□ -0.55
SHANK2-208ENST00000426687 C7orf61Q8IZ16 206 aa11.62□□□□□ -0.55
SHANK2-208ENST00000426687 RAET1EQ8TD07 263 aa11.62□□□□□ -0.55
SHANK2-208ENST00000426687 TRIM47Q96LD4 638 aa11.62□□□□□ -0.55
SHANK2-208ENST00000426687 UBE2OQ9C0C9 1292 aaKnown RBP11.62□□□□□ -0.55
SHANK2-208ENST00000426687 DEFB129Q9H1M3 183 aa11.62□□□□□ -0.55
SHANK2-208ENST00000426687 ZMYND8Q9ULU4 1186 aaPredicted RBP11.62□□□□□ -0.55
SHANK2-208ENST00000426687 RRP7AQ9Y3A4 280 aaKnown RBP11.62□□□□□ -0.55
SHANK2-208ENST00000426687 MYO3BQ8WXR4 1341 aa11.61□□□□□ -0.55
SHANK2-208ENST00000426687 WDHD1O75717 1129 aaPredicted RBP11.61□□□□□ -0.55
SHANK2-208ENST00000426687 UFL1O94874 794 aa11.61□□□□□ -0.55
SHANK2-208ENST00000426687 MYL6BP14649 208 aa11.61□□□□□ -0.55
SHANK2-208ENST00000426687 IREB2P48200 963 aaKnown RBP11.61□□□□□ -0.55
SHANK2-208ENST00000426687 NLRP10Q86W26 655 aa11.61□□□□□ -0.55
SHANK2-208ENST00000426687 FAM43AQ8N2R8 423 aa11.61□□□□□ -0.55
SHANK2-208ENST00000426687 ZBED3Q96IU2 234 aaPredicted RBP11.61□□□□□ -0.55
SHANK2-208ENST00000426687 ZCCHC17Q9NP64 241 aaKnown RBP11.61□□□□□ -0.55
SHANK2-208ENST00000426687 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
SHANK2-208ENST00000426687 CDH23Q9H251 3354 aa11.61□□□□□ -0.55
SHANK2-208ENST00000426687 CCL15-CCL14A0A0B4J2E2 113 aa11.6□□□□□ -0.55
SHANK2-208ENST00000426687 HOXD10P28358 340 aa11.6□□□□□ -0.55
SHANK2-208ENST00000426687 SF3B3Q15393 1217 aaKnown RBP11.6□□□□□ -0.55
SHANK2-208ENST00000426687 CCL15Q16663 113 aa11.6□□□□□ -0.55
SHANK2-208ENST00000426687 DACT2Q5SW24 774 aa11.6□□□□□ -0.55
SHANK2-208ENST00000426687 ZNF697Q5TEC3 545 aa11.6□□□□□ -0.55
SHANK2-208ENST00000426687 HELBQ8NG08 1087 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms