RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 USP26Q9BXU7 913 aa18.27■□□□□ 0.52
GINS3-203ENST00000426538 ANO2Q9NQ90 1003 aa18.27■□□□□ 0.52
GINS3-203ENST00000426538 GNL3LQ9NVN8 582 aaKnown RBP18.27■□□□□ 0.52
GINS3-203ENST00000426538 SGSM2O43147 1006 aa18.26■□□□□ 0.51
GINS3-203ENST00000426538 ZAP70P43403 619 aa18.26■□□□□ 0.51
GINS3-203ENST00000426538 RBM25P49756 843 aaKnown RBP18.26■□□□□ 0.51
GINS3-203ENST00000426538 BCAMP50895 628 aa18.26■□□□□ 0.51
GINS3-203ENST00000426538 SCARF1Q14162 830 aa18.26■□□□□ 0.51
GINS3-203ENST00000426538 KIAA1211Q6ZU35 1233 aa18.26■□□□□ 0.51
GINS3-203ENST00000426538 MASTLQ96GX5 879 aa18.26■□□□□ 0.51
GINS3-203ENST00000426538 ZNF804BA4D1E1 1349 aa18.26■□□□□ 0.51
GINS3-203ENST00000426538 TTF1Q15361 905 aaPredicted RBP18.26■□□□□ 0.51
GINS3-203ENST00000426538 LEMD3Q9Y2U8 911 aa18.26■□□□□ 0.51
GINS3-203ENST00000426538 RFX7Q2KHR2 1363 aa18.25■□□□□ 0.51
GINS3-203ENST00000426538 XDHP47989 1333 aa18.25■□□□□ 0.51
GINS3-203ENST00000426538 H0YIN7 160 aa18.25■□□□□ 0.51
GINS3-203ENST00000426538 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
GINS3-203ENST00000426538 TMX4Q9H1E5 349 aaPredicted RBP18.25■□□□□ 0.51
GINS3-203ENST00000426538 NMIQ13287 307 aaPredicted RBP18.24■□□□□ 0.51
GINS3-203ENST00000426538 ZNF622Q969S3 477 aaKnown RBP eCLIP18.24■□□□□ 0.51
GINS3-203ENST00000426538 ANTXR1Q9H6X2 564 aa18.24■□□□□ 0.51
GINS3-203ENST00000426538 NSFL1CQ9UNZ2 370 aaKnown RBP18.24■□□□□ 0.51
GINS3-203ENST00000426538 ARAP2Q8WZ64 1704 aa18.24■□□□□ 0.51
GINS3-203ENST00000426538 ANKRD31Q8N7Z5 1873 aa18.24■□□□□ 0.51
GINS3-203ENST00000426538 WTIPA6NIX2 430 aaPredicted RBP18.23■□□□□ 0.51
GINS3-203ENST00000426538 PPEF1O14829 653 aaPredicted RBP18.23■□□□□ 0.51
GINS3-203ENST00000426538 EPB41L2O43491 1005 aaKnown RBP18.23■□□□□ 0.51
GINS3-203ENST00000426538 GYG1P46976 350 aa18.23■□□□□ 0.51
GINS3-203ENST00000426538 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
GINS3-203ENST00000426538 SPATA5Q8NB90 893 aa18.23■□□□□ 0.51
GINS3-203ENST00000426538 FAM227BQ96M60 508 aa18.23■□□□□ 0.51
GINS3-203ENST00000426538 HMG20BQ9P0W2 317 aa18.23■□□□□ 0.51
GINS3-203ENST00000426538 RAD50Q92878 1312 aa18.23■□□□□ 0.51
GINS3-203ENST00000426538 MCCP23508 829 aa18.23■□□□□ 0.51
GINS3-203ENST00000426538 PI16Q6UXB8 463 aa18.23■□□□□ 0.51
GINS3-203ENST00000426538 SP8Q8IXZ3 490 aa18.23■□□□□ 0.51
GINS3-203ENST00000426538 FAM84BQ96KN1 310 aaPredicted RBP18.23■□□□□ 0.51
GINS3-203ENST00000426538 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.23■□□□□ 0.51
GINS3-203ENST00000426538 A0A1B0GUL6 1792 aa18.22■□□□□ 0.51
GINS3-203ENST00000426538 FRAT2O75474 233 aaPredicted RBP18.22■□□□□ 0.51
GINS3-203ENST00000426538 CYP2E1P05181 493 aaPredicted RBP18.22■□□□□ 0.51
GINS3-203ENST00000426538 ZFYP08048 801 aaPredicted RBP18.22■□□□□ 0.51
GINS3-203ENST00000426538 RASGRF1Q13972 1273 aa18.22■□□□□ 0.51
GINS3-203ENST00000426538 IL25Q9H293 177 aa18.22■□□□□ 0.51
GINS3-203ENST00000426538 RNF113AO15541 343 aaKnown RBP18.21■□□□□ 0.51
GINS3-203ENST00000426538 ATP2B4P23634 1241 aa18.21■□□□□ 0.51
GINS3-203ENST00000426538 HIBADHP31937 336 aaKnown RBP18.21■□□□□ 0.51
GINS3-203ENST00000426538 GPSM2P81274 684 aa18.21■□□□□ 0.51
GINS3-203ENST00000426538 ZSCAN25Q6NSZ9 544 aa18.21■□□□□ 0.51
GINS3-203ENST00000426538 IPO9Q96P70 1041 aaKnown RBP18.21■□□□□ 0.51
GINS3-203ENST00000426538 GGA1Q9UJY5 639 aa18.21■□□□□ 0.51
GINS3-203ENST00000426538 ATP6V0A2Q9Y487 856 aa18.21■□□□□ 0.51
GINS3-203ENST00000426538 A0A0D9SFI3 127 aa18.2■□□□□ 0.5
GINS3-203ENST00000426538 MCMDC2Q4G0Z9 681 aa18.2■□□□□ 0.5
GINS3-203ENST00000426538 STYK1Q6J9G0 422 aa18.2■□□□□ 0.5
GINS3-203ENST00000426538 FBXO33Q7Z6M2 555 aa18.2■□□□□ 0.5
GINS3-203ENST00000426538 HELLSQ9NRZ9 838 aa18.2■□□□□ 0.5
GINS3-203ENST00000426538 PODXL2Q9NZ53 605 aa18.2■□□□□ 0.5
GINS3-203ENST00000426538 DENND2AQ9ULE3 1009 aa18.2■□□□□ 0.5
GINS3-203ENST00000426538 IQSEC3Q9UPP2 1182 aaPredicted RBP18.2■□□□□ 0.5
GINS3-203ENST00000426538 AKAP11Q9UKA4 1901 aa18.19■□□□□ 0.5
GINS3-203ENST00000426538 IDH1O75874 414 aaKnown RBP18.19■□□□□ 0.5
GINS3-203ENST00000426538 UFL1O94874 794 aa18.19■□□□□ 0.5
GINS3-203ENST00000426538 ZBTB7AO95365 584 aa18.19■□□□□ 0.5
GINS3-203ENST00000426538 R3HDM1Q15032 1099 aaKnown RBP18.19■□□□□ 0.5
GINS3-203ENST00000426538 CNKSR1Q969H4 720 aa18.19■□□□□ 0.5
GINS3-203ENST00000426538 SEMA3EO15041 775 aa18.18■□□□□ 0.5
GINS3-203ENST00000426538 KLRK1P26718 216 aa18.18■□□□□ 0.5
GINS3-203ENST00000426538 POLD1P28340 1107 aa18.18■□□□□ 0.5
GINS3-203ENST00000426538 WASHC4Q2M389 1173 aa18.18■□□□□ 0.5
GINS3-203ENST00000426538 MTFR1LQ9H019 292 aa18.18■□□□□ 0.5
GINS3-203ENST00000426538 LSG1Q9H089 658 aaKnown RBP18.18■□□□□ 0.5
GINS3-203ENST00000426538 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
GINS3-203ENST00000426538 C6orf229H3BNL8 230 aa18.18■□□□□ 0.5
GINS3-203ENST00000426538 CHRNA5P30532 468 aa18.18■□□□□ 0.5
GINS3-203ENST00000426538 MAP3K12Q12852 859 aa18.18■□□□□ 0.5
GINS3-203ENST00000426538 ZMYM1Q5SVZ6 1142 aa18.18■□□□□ 0.5
GINS3-203ENST00000426538 SLC9C2Q5TAH2 1124 aa18.18■□□□□ 0.5
GINS3-203ENST00000426538 ZNF804AQ7Z570 1209 aa18.18■□□□□ 0.5
GINS3-203ENST00000426538 PIH1D3Q9NQM4 214 aaKnown RBP18.18■□□□□ 0.5
GINS3-203ENST00000426538 CHGBP05060 677 aa18.17■□□□□ 0.5
GINS3-203ENST00000426538 SLC51AQ86UW1 340 aa18.17■□□□□ 0.5
GINS3-203ENST00000426538 TXNRD3Q86VQ6 643 aa18.17■□□□□ 0.5
GINS3-203ENST00000426538 MPNDQ8N594 471 aa18.17■□□□□ 0.5
GINS3-203ENST00000426538 SEC62Q99442 399 aaKnown RBP18.17■□□□□ 0.5
GINS3-203ENST00000426538 LRP2BPQ9P2M1 347 aa18.17■□□□□ 0.5
GINS3-203ENST00000426538 ATF5Q9Y2D1 282 aaPredicted RBP18.17■□□□□ 0.5
GINS3-203ENST00000426538 C15orf52Q6ZUT6 534 aaKnown RBP18.16■□□□□ 0.5
GINS3-203ENST00000426538 TBC1D16Q8TBP0 767 aa18.16■□□□□ 0.5
GINS3-203ENST00000426538 CCDC171Q6TFL3 1326 aa18.16■□□□□ 0.5
GINS3-203ENST00000426538 PTH1RQ03431 593 aa18.15■□□□□ 0.5
GINS3-203ENST00000426538 BECN1Q14457 450 aa18.15■□□□□ 0.5
GINS3-203ENST00000426538 ZNF589Q86UQ0 364 aaPredicted RBP18.15■□□□□ 0.5
GINS3-203ENST00000426538 APPBP2Q92624 585 aa18.15■□□□□ 0.5
GINS3-203ENST00000426538 ABCF2Q9UG63 623 aa18.15■□□□□ 0.5
GINS3-203ENST00000426538 POLLQ9UGP5 575 aa18.15■□□□□ 0.5
GINS3-203ENST00000426538 MED23Q9ULK4 1368 aa18.15■□□□□ 0.5
GINS3-203ENST00000426538 COL11A2P13942 1736 aaPredicted RBP18.15■□□□□ 0.5
GINS3-203ENST00000426538 HSPA4P34932 840 aa18.15■□□□□ 0.5
GINS3-203ENST00000426538 ADD2P35612 726 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms