RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 GPR162Q16538 588 aa11.28□□□□□ -0.6
TPM3P4-201ENST00000425942 DDX46Q7L014 1031 aaKnown RBP11.28□□□□□ -0.6
TPM3P4-201ENST00000425942 UBE3BQ7Z3V4 1068 aa11.28□□□□□ -0.6
TPM3P4-201ENST00000425942 FTSJ3Q8IY81 847 aaKnown RBP11.28□□□□□ -0.6
TPM3P4-201ENST00000425942 YTHDC1Q96MU7 727 aaKnown RBP11.28□□□□□ -0.6
TPM3P4-201ENST00000425942 C9orf78Q9NZ63 289 aaPredicted RBP11.28□□□□□ -0.6
TPM3P4-201ENST00000425942 ZC3H4Q9UPT8 1303 aaKnown RBP11.28□□□□□ -0.6
TPM3P4-201ENST00000425942 DUOX1Q9NRD9 1551 aa11.28□□□□□ -0.6
TPM3P4-201ENST00000425942 ARAP2Q8WZ64 1704 aa11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 BCAR3O75815 825 aa11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 HCLS1P14317 486 aaPredicted RBP11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 PSEN2P49810 448 aa11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 CASP7P55210 303 aa11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 CAMK2BQ13554 666 aa11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 GRAPQ13588 217 aa11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 CCDC93Q567U6 631 aa11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 INTS3Q68E01 1043 aaKnown RBP11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 ZNF454Q8N9F8 522 aa11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 GRAPLQ8TC17 118 aaPredicted RBP11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 ZNF622Q969S3 477 aaKnown RBP eCLIP11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 CDC5LQ99459 802 aaKnown RBP11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 BCS1LQ9Y276 419 aa11.27□□□□□ -0.61
TPM3P4-201ENST00000425942 PPEF1O14829 653 aaPredicted RBP11.26□□□□□ -0.61
TPM3P4-201ENST00000425942 YBX3P16989 372 aaKnown RBP eCLIP11.26□□□□□ -0.61
TPM3P4-201ENST00000425942 CCDC24Q8N4L8 307 aa11.26□□□□□ -0.61
TPM3P4-201ENST00000425942 FRAT1Q92837 279 aaPredicted RBP11.26□□□□□ -0.61
TPM3P4-201ENST00000425942 TMX4Q9H1E5 349 aaPredicted RBP11.26□□□□□ -0.61
TPM3P4-201ENST00000425942 MYH13Q9UKX3 1938 aa11.26□□□□□ -0.61
TPM3P4-201ENST00000425942 COL4A1P02462 1669 aa11.26□□□□□ -0.61
TPM3P4-201ENST00000425942 BBOX1O75936 387 aa11.25□□□□□ -0.61
TPM3P4-201ENST00000425942 GNAI3P08754 354 aa11.25□□□□□ -0.61
TPM3P4-201ENST00000425942 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
TPM3P4-201ENST00000425942 DZIP1LQ8IYY4 767 aaKnown RBP11.25□□□□□ -0.61
TPM3P4-201ENST00000425942 CHMP4BQ9H444 224 aaKnown RBP11.25□□□□□ -0.61
TPM3P4-201ENST00000425942 UBTFL1P0CB47 393 aaPredicted RBP11.24□□□□□ -0.61
TPM3P4-201ENST00000425942 FOSBP53539 338 aa11.24□□□□□ -0.61
TPM3P4-201ENST00000425942 RABL6Q3YEC7 729 aaPredicted RBP11.24□□□□□ -0.61
TPM3P4-201ENST00000425942 RTKN2Q8IZC4 609 aa11.24□□□□□ -0.61
TPM3P4-201ENST00000425942 RNF166Q96A37 237 aaPredicted RBP11.24□□□□□ -0.61
TPM3P4-201ENST00000425942 CSF1RP07333 972 aa11.23□□□□□ -0.61
TPM3P4-201ENST00000425942 PDE3AQ14432 1141 aa11.23□□□□□ -0.61
TPM3P4-201ENST00000425942 RTL5Q5HYW3 569 aaPredicted RBP11.23□□□□□ -0.61
TPM3P4-201ENST00000425942 SYNE4Q8N205 404 aa11.23□□□□□ -0.61
TPM3P4-201ENST00000425942 TTLL11Q8NHH1 800 aa11.23□□□□□ -0.61
TPM3P4-201ENST00000425942 C7orf43Q8WVR3 580 aa11.23□□□□□ -0.61
TPM3P4-201ENST00000425942 PSMD1Q99460 953 aa11.23□□□□□ -0.61
TPM3P4-201ENST00000425942 TAOK3Q9H2K8 898 aa11.23□□□□□ -0.61
TPM3P4-201ENST00000425942 ATP6V0A2Q9Y487 856 aa11.23□□□□□ -0.61
TPM3P4-201ENST00000425942 ZNF646O15015 1829 aaPredicted RBP11.22□□□□□ -0.61
TPM3P4-201ENST00000425942 NBPF7P0C2Y1 421 aaPredicted RBP11.22□□□□□ -0.61
TPM3P4-201ENST00000425942 IGHMBP2P38935 993 aaKnown RBP11.22□□□□□ -0.61
TPM3P4-201ENST00000425942 ANKRD18AQ8IVF6 992 aa11.22□□□□□ -0.61
TPM3P4-201ENST00000425942 SP8Q8IXZ3 490 aa11.22□□□□□ -0.61
TPM3P4-201ENST00000425942 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
TPM3P4-201ENST00000425942 USP44Q9H0E7 712 aa11.22□□□□□ -0.61
TPM3P4-201ENST00000425942 VPS33BQ9H267 617 aa11.22□□□□□ -0.61
TPM3P4-201ENST00000425942 DDX19BQ9UMR2 479 aa11.22□□□□□ -0.61
TPM3P4-201ENST00000425942 SCN4AP35499 1836 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 ANKRD18BA2A2Z9 1011 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 DPYSL4O14531 572 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 C21orf2O43822 256 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 ITGA6P23229 1130 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 FOXO4P98177 505 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 FKBP4Q02790 459 aaKnown RBP eCLIP11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 IFIT5Q13325 482 aaKnown RBP11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 FAM161AQ3B820 660 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 ADGRD1Q6QNK2 874 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 ITPRIPQ8IWB1 547 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 TMEM57Q8N5G2 664 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 SUPT20HQ8NEM7 779 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 SUCLG2Q96I99 432 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 GREM2Q9H772 168 aa11.21□□□□□ -0.61
TPM3P4-201ENST00000425942 WDR90Q96KV7 1748 aa11.21□□□□□ -0.62
TPM3P4-201ENST00000425942 NFKBIEO00221 500 aa11.2□□□□□ -0.62
TPM3P4-201ENST00000425942 LMNB1P20700 586 aa11.2□□□□□ -0.62
TPM3P4-201ENST00000425942 RPS8P62241 208 aaKnown RBP11.2□□□□□ -0.62
TPM3P4-201ENST00000425942 MTX1Q13505 466 aa11.2□□□□□ -0.62
TPM3P4-201ENST00000425942 MVPQ14764 893 aaKnown RBP11.2□□□□□ -0.62
TPM3P4-201ENST00000425942 CCDC57Q2TAC2 916 aa11.2□□□□□ -0.62
TPM3P4-201ENST00000425942 CELF1Q92879 486 aaKnown RBP11.2□□□□□ -0.62
TPM3P4-201ENST00000425942 MEIS3Q99687 375 aa11.2□□□□□ -0.62
TPM3P4-201ENST00000425942 RTFDC1Q9BY42 306 aaPredicted RBP11.2□□□□□ -0.62
TPM3P4-201ENST00000425942 BICC1Q9H694 974 aaKnown RBP11.2□□□□□ -0.62
TPM3P4-201ENST00000425942 BSDC1Q9NW68 430 aaPredicted RBP11.2□□□□□ -0.62
TPM3P4-201ENST00000425942 XDHP47989 1333 aa11.19□□□□□ -0.62
TPM3P4-201ENST00000425942 GNAI2P04899 355 aa11.19□□□□□ -0.62
TPM3P4-201ENST00000425942 RRP1P56182 461 aaKnown RBP11.19□□□□□ -0.62
TPM3P4-201ENST00000425942 LMBR1LQ6UX01 489 aa11.19□□□□□ -0.62
TPM3P4-201ENST00000425942 ANKRD44Q8N8A2 993 aa11.19□□□□□ -0.62
TPM3P4-201ENST00000425942 CLUAP1Q96AJ1 413 aa11.19□□□□□ -0.62
TPM3P4-201ENST00000425942 MPHOSPH8Q99549 860 aa11.19□□□□□ -0.62
TPM3P4-201ENST00000425942 PODXL2Q9NZ53 605 aa11.19□□□□□ -0.62
TPM3P4-201ENST00000425942 MED23Q9ULK4 1368 aa11.18□□□□□ -0.62
TPM3P4-201ENST00000425942 TAF7LQ5H9L4 462 aa11.18□□□□□ -0.62
TPM3P4-201ENST00000425942 DPP8Q6V1X1 898 aaPredicted RBP11.18□□□□□ -0.62
TPM3P4-201ENST00000425942 ARHGAP27Q6ZUM4 889 aa11.18□□□□□ -0.62
TPM3P4-201ENST00000425942 KAZALD1Q96I82 304 aa11.18□□□□□ -0.62
TPM3P4-201ENST00000425942 SEC31BQ9NQW1 1179 aa11.18□□□□□ -0.62
TPM3P4-201ENST00000425942 WWC3Q9ULE0 1092 aa11.18□□□□□ -0.62
TPM3P4-201ENST00000425942 CHMP3Q9Y3E7 222 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms