RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 PLCL1Q15111 1095 aa5.95□□□□□ -1.46
R3HDM1-205ENST00000425804 CEP135Q66GS9 1140 aa5.95□□□□□ -1.46
R3HDM1-205ENST00000425804 FAM168AQ92567 244 aa5.95□□□□□ -1.46
R3HDM1-205ENST00000425804 RUSC1Q9BVN2 902 aa5.95□□□□□ -1.46
R3HDM1-205ENST00000425804 SEC31BQ9NQW1 1179 aa5.95□□□□□ -1.46
R3HDM1-205ENST00000425804 DKK1O94907 266 aa5.94□□□□□ -1.46
R3HDM1-205ENST00000425804 EPHA1P21709 976 aa5.94□□□□□ -1.46
R3HDM1-205ENST00000425804 LCNL1Q6ZST4 164 aa5.94□□□□□ -1.46
R3HDM1-205ENST00000425804 RGL4Q8IZJ4 473 aa5.94□□□□□ -1.46
R3HDM1-205ENST00000425804 CMTR1Q8N1G2 835 aaKnown RBP5.94□□□□□ -1.46
R3HDM1-205ENST00000425804 ZNF594Q96JF6 807 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-205ENST00000425804 JAG2Q9Y219 1238 aa5.94□□□□□ -1.46
R3HDM1-205ENST00000425804 USP17L3A6NCW0 530 aa5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 USP17L4A6NCW7 530 aa5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 SMNDC1O75940 238 aaKnown RBP eCLIP5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 CFPP27918 469 aa5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 ADMP35318 185 aa5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 MESP2Q0VG99 397 aa5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 NFKBIBQ15653 356 aa5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 USP17L2Q6R6M4 530 aa5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 USP17L1Q7RTZ2 530 aa5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 ATG4DQ86TL0 474 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 PLEKHM2Q8IWE5 1019 aa5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 TMEM40Q8WWA1 233 aa5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 TOX2Q96NM4 488 aa5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 SH2B1Q9NRF2 756 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 RBM19Q9Y4C8 960 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-205ENST00000425804 FAM95CA0A1B0GW59 222 aa5.92□□□□□ -1.46
R3HDM1-205ENST00000425804 NLRP12P59046 1061 aa5.92□□□□□ -1.46
R3HDM1-205ENST00000425804 COL13A1Q5TAT6 717 aaPredicted RBP5.92□□□□□ -1.46
R3HDM1-205ENST00000425804 ZNF574Q6ZN55 896 aaPredicted RBP5.92□□□□□ -1.46
R3HDM1-205ENST00000425804 C1QL4Q86Z23 238 aa5.92□□□□□ -1.46
R3HDM1-205ENST00000425804 BHLHE22Q8NFJ8 381 aaPredicted RBP5.92□□□□□ -1.46
R3HDM1-205ENST00000425804 FAM84AQ96KN4 292 aa5.92□□□□□ -1.46
R3HDM1-205ENST00000425804 ZC3H7BQ9UGR2 993 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-205ENST00000425804 KCNMB2Q9Y691 235 aa5.92□□□□□ -1.46
R3HDM1-205ENST00000425804 PAOXQ6QHF9 649 aa5.91□□□□□ -1.46
R3HDM1-205ENST00000425804 WFDC3Q8IUB2 231 aa5.91□□□□□ -1.46
R3HDM1-205ENST00000425804 BCL7CQ8WUZ0 217 aaPredicted RBP5.91□□□□□ -1.46
R3HDM1-205ENST00000425804 TBC1D32Q96NH3 1257 aa5.91□□□□□ -1.46
R3HDM1-205ENST00000425804 QTRT2Q9H974 415 aaKnown RBP5.91□□□□□ -1.46
R3HDM1-205ENST00000425804 FAM170BA6NMN3 283 aa5.9□□□□□ -1.46
R3HDM1-205ENST00000425804 C11orf91Q3C1V1 193 aa5.9□□□□□ -1.46
R3HDM1-205ENST00000425804 TTLL10Q6ZVT0 673 aa5.9□□□□□ -1.46
R3HDM1-205ENST00000425804 ZAR1Q86SH2 424 aa5.9□□□□□ -1.46
R3HDM1-205ENST00000425804 GLIS3Q8NEA6 775 aa5.9□□□□□ -1.46
R3HDM1-205ENST00000425804 ZSCAN18Q8TBC5 510 aaPredicted RBP5.9□□□□□ -1.46
R3HDM1-205ENST00000425804 RASSF4Q9H2L5 321 aa5.9□□□□□ -1.46
R3HDM1-205ENST00000425804 LRRC4CQ9HCJ2 640 aa5.9□□□□□ -1.46
R3HDM1-205ENST00000425804 LMCD1Q9NZU5 365 aa5.9□□□□□ -1.46
R3HDM1-205ENST00000425804 SLC5A6Q9Y289 635 aa5.9□□□□□ -1.46
R3HDM1-205ENST00000425804 MEGF11A6BM72 1044 aa5.89□□□□□ -1.47
R3HDM1-205ENST00000425804 LGR5O75473 907 aa5.89□□□□□ -1.47
R3HDM1-205ENST00000425804 RAP1GAPP47736 663 aa5.89□□□□□ -1.47
R3HDM1-205ENST00000425804 NLRP13Q86W25 1043 aa5.89□□□□□ -1.47
R3HDM1-205ENST00000425804 SPACA7Q96KW9 195 aa5.89□□□□□ -1.47
R3HDM1-205ENST00000425804 ADAM19Q9H013 955 aa5.89□□□□□ -1.47
R3HDM1-205ENST00000425804 PRKAG2Q9UGJ0 569 aa5.89□□□□□ -1.47
R3HDM1-205ENST00000425804 MKRN1Q9UHC7 482 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-205ENST00000425804 IGFBP4P22692 258 aa5.88□□□□□ -1.47
R3HDM1-205ENST00000425804 PIP4K2BP78356 416 aa5.88□□□□□ -1.47
R3HDM1-205ENST00000425804 HYAL2Q12891 473 aa5.88□□□□□ -1.47
R3HDM1-205ENST00000425804 NEUROD2Q15784 382 aa5.88□□□□□ -1.47
R3HDM1-205ENST00000425804 SPRED2Q7Z698 418 aa5.88□□□□□ -1.47
R3HDM1-205ENST00000425804 LRRC56Q8IYG6 542 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-205ENST00000425804 C12orf50Q8NA57 414 aaPredicted RBP5.88□□□□□ -1.47
R3HDM1-205ENST00000425804 OR13H1Q8NG92 308 aa5.88□□□□□ -1.47
R3HDM1-205ENST00000425804 FBLIM1Q8WUP2 373 aa5.88□□□□□ -1.47
R3HDM1-205ENST00000425804 ZMYND15Q9H091 742 aa5.88□□□□□ -1.47
R3HDM1-205ENST00000425804 RC3H2Q9HBD1 1191 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-205ENST00000425804 H3BRJ5 948 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 TIAF1O95411 115 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 ZSCAN22P10073 491 aaPredicted RBP5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 PTPRAP18433 802 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 SEC13P55735 322 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 NUTM2GQ5VZR2 741 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 CDPF1Q6NVV7 123 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 TREML1Q86YW5 311 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 SIAH1Q8IUQ4 282 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 GATA6Q92908 595 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 WNT8BQ93098 351 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 HINFPQ9BQA5 517 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 OSGEPQ9NPF4 335 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 RAPGEFL1Q9UHV5 662 aa5.87□□□□□ -1.47
R3HDM1-205ENST00000425804 FAM177BA6PVY3 158 aa5.86□□□□□ -1.47
R3HDM1-205ENST00000425804 USP11P51784 963 aa5.86□□□□□ -1.47
R3HDM1-205ENST00000425804 TRIP4Q15650 581 aaPredicted RBP5.86□□□□□ -1.47
R3HDM1-205ENST00000425804 ECM1Q16610 540 aa5.86□□□□□ -1.47
R3HDM1-205ENST00000425804 DUSP27Q5VZP5 1158 aa5.86□□□□□ -1.47
R3HDM1-205ENST00000425804 PBX4Q9BYU1 374 aa5.86□□□□□ -1.47
R3HDM1-205ENST00000425804 LRRC10BA6NIK2 292 aa5.85□□□□□ -1.47
R3HDM1-205ENST00000425804 RNASE1P07998 156 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-205ENST00000425804 SMG8Q8ND04 991 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-205ENST00000425804 MYO19Q96H55 970 aa5.85□□□□□ -1.47
R3HDM1-205ENST00000425804 TMPRSS13Q9BYE2 586 aa5.85□□□□□ -1.47
R3HDM1-205ENST00000425804 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.85□□□□□ -1.47
R3HDM1-205ENST00000425804 TSPAN15O95858 294 aa5.84□□□□□ -1.47
R3HDM1-205ENST00000425804 CABP4P57796 275 aa5.84□□□□□ -1.47
R3HDM1-205ENST00000425804 ZNF765Q7L2R6 523 aa5.84□□□□□ -1.47
R3HDM1-205ENST00000425804 STK11IPQ8N1F8 1099 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms