RNA–Protein interactions for RNA: ENST00000425551.1

TUBA4A-204, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-204ENST00000425551 CTGFP29279 349 aa12.82□□□□□ -0.36
TUBA4A-204ENST00000425551 PARP10Q53GL7 1025 aa12.82□□□□□ -0.36
TUBA4A-204ENST00000425551 TTC28Q96AY4 2481 aa12.82□□□□□ -0.36
TUBA4A-204ENST00000425551 ZNF646O15015 1829 aaPredicted RBP12.81□□□□□ -0.36
TUBA4A-204ENST00000425551 USP17L8P0C7I0 530 aa12.81□□□□□ -0.36
TUBA4A-204ENST00000425551 CCDC184Q52MB2 194 aa12.81□□□□□ -0.36
TUBA4A-204ENST00000425551 COPS6Q7L5N1 327 aa12.81□□□□□ -0.36
TUBA4A-204ENST00000425551 XAGE3Q8WTP9 111 aa12.81□□□□□ -0.36
TUBA4A-204ENST00000425551 CCDC85AQ96PX6 553 aaPredicted RBP12.81□□□□□ -0.36
TUBA4A-204ENST00000425551 ATP5J2-PTCD1G3V325 749 aa12.8□□□□□ -0.36
TUBA4A-204ENST00000425551 PPP2R1AP30153 589 aa12.8□□□□□ -0.36
TUBA4A-204ENST00000425551 CDAN1Q8IWY9 1227 aa12.8□□□□□ -0.36
TUBA4A-204ENST00000425551 DPF3Q92784 378 aa12.8□□□□□ -0.36
TUBA4A-204ENST00000425551 WNK4Q96J92 1243 aa12.8□□□□□ -0.36
TUBA4A-204ENST00000425551 STAP2Q9UGK3 403 aa12.8□□□□□ -0.36
TUBA4A-204ENST00000425551 PRUNE2Q8WUY3 3088 aa12.79□□□□□ -0.36
TUBA4A-204ENST00000425551 UFL1O94874 794 aa12.79□□□□□ -0.36
TUBA4A-204ENST00000425551 SREBF2Q12772 1141 aa12.79□□□□□ -0.36
TUBA4A-204ENST00000425551 SLC4A8Q2Y0W8 1093 aa12.79□□□□□ -0.36
TUBA4A-204ENST00000425551 UBE2Q1Q7Z7E8 422 aa12.79□□□□□ -0.36
TUBA4A-204ENST00000425551 TXNRD3Q86VQ6 643 aa12.79□□□□□ -0.36
TUBA4A-204ENST00000425551 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
TUBA4A-204ENST00000425551 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
TUBA4A-204ENST00000425551 PITPNM2Q9BZ72 1349 aa12.79□□□□□ -0.36
TUBA4A-204ENST00000425551 KLRK1P26718 216 aa12.78□□□□□ -0.36
TUBA4A-204ENST00000425551 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
TUBA4A-204ENST00000425551 SP3Q02447 781 aa12.78□□□□□ -0.36
TUBA4A-204ENST00000425551 TCIRG1Q13488 830 aa12.78□□□□□ -0.36
TUBA4A-204ENST00000425551 AGBL3Q8NEM8 1001 aa12.78□□□□□ -0.36
TUBA4A-204ENST00000425551 ZC3H12CQ9C0D7 883 aaKnown RBP12.78□□□□□ -0.36
TUBA4A-204ENST00000425551 SH3TC1Q8TE82 1336 aa12.78□□□□□ -0.36
TUBA4A-204ENST00000425551 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
TUBA4A-204ENST00000425551 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.37
TUBA4A-204ENST00000425551 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
TUBA4A-204ENST00000425551 DACT2Q5SW24 774 aa12.77□□□□□ -0.37
TUBA4A-204ENST00000425551 PNISRQ8TF01 805 aaKnown RBP12.77□□□□□ -0.37
TUBA4A-204ENST00000425551 ERO1AQ96HE7 468 aa12.77□□□□□ -0.37
TUBA4A-204ENST00000425551 YTHDC1Q96MU7 727 aaKnown RBP12.77□□□□□ -0.37
TUBA4A-204ENST00000425551 RPS8P62241 208 aaKnown RBP12.76□□□□□ -0.37
TUBA4A-204ENST00000425551 SLC9C1Q4G0N8 1177 aa12.76□□□□□ -0.37
TUBA4A-204ENST00000425551 SLC10A4Q96EP9 437 aa12.76□□□□□ -0.37
TUBA4A-204ENST00000425551 ZBED3Q96IU2 234 aaPredicted RBP12.76□□□□□ -0.37
TUBA4A-204ENST00000425551 MUC3AQ02505 3323 aa12.76□□□□□ -0.37
TUBA4A-204ENST00000425551 PSME4Q14997 1843 aa12.76□□□□□ -0.37
TUBA4A-204ENST00000425551 LAMA2P24043 3122 aaKnown RBP12.75□□□□□ -0.37
TUBA4A-204ENST00000425551 MANSC4A6NHS7 340 aaPredicted RBP12.75□□□□□ -0.37
TUBA4A-204ENST00000425551 ZBTB7BO15156 539 aaPredicted RBP12.75□□□□□ -0.37
TUBA4A-204ENST00000425551 USP2O75604 605 aaPredicted RBP12.75□□□□□ -0.37
TUBA4A-204ENST00000425551 NBPF12Q5TAG4 269 aaPredicted RBP12.75□□□□□ -0.37
TUBA4A-204ENST00000425551 FAM43AQ8N2R8 423 aa12.75□□□□□ -0.37
TUBA4A-204ENST00000425551 DLG5Q8TDM6 1919 aa12.75□□□□□ -0.37
TUBA4A-204ENST00000425551 BRI3BPQ8WY22 251 aa12.75□□□□□ -0.37
TUBA4A-204ENST00000425551 MS4A4AQ96JQ5 239 aa12.75□□□□□ -0.37
TUBA4A-204ENST00000425551 PODXL2Q9NZ53 605 aa12.75□□□□□ -0.37
TUBA4A-204ENST00000425551 USP17L3A6NCW0 530 aa12.74□□□□□ -0.37
TUBA4A-204ENST00000425551 USP17L4A6NCW7 530 aa12.74□□□□□ -0.37
TUBA4A-204ENST00000425551 CENPBP07199 599 aaPredicted RBP12.74□□□□□ -0.37
TUBA4A-204ENST00000425551 USP17L1Q7RTZ2 530 aa12.74□□□□□ -0.37
TUBA4A-204ENST00000425551 ARMC9Q7Z3E5 817 aa12.74□□□□□ -0.37
TUBA4A-204ENST00000425551 SNAP23O00161 211 aa12.73□□□□□ -0.37
TUBA4A-204ENST00000425551 KIAA0825Q8IV33 1275 aa12.73□□□□□ -0.37
TUBA4A-204ENST00000425551 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
TUBA4A-204ENST00000425551 EYA3Q99504 573 aa12.73□□□□□ -0.37
TUBA4A-204ENST00000425551 ISCA1Q9BUE6 129 aa12.73□□□□□ -0.37
TUBA4A-204ENST00000425551 DEFB129Q9H1M3 183 aa12.73□□□□□ -0.37
TUBA4A-204ENST00000425551 ANKIB1Q9P2G1 1089 aa12.73□□□□□ -0.37
TUBA4A-204ENST00000425551 TESPA1A2RU30 521 aaPredicted RBP12.72□□□□□ -0.37
TUBA4A-204ENST00000425551 ALDH1A1P00352 501 aa12.72□□□□□ -0.37
TUBA4A-204ENST00000425551 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
TUBA4A-204ENST00000425551 CERS5Q8N5B7 392 aa12.72□□□□□ -0.37
TUBA4A-204ENST00000425551 DEFB123Q8N688 67 aa12.72□□□□□ -0.37
TUBA4A-204ENST00000425551 ELP3Q9H9T3 547 aa12.72□□□□□ -0.37
TUBA4A-204ENST00000425551 GGA1Q9UJY5 639 aa12.72□□□□□ -0.37
TUBA4A-204ENST00000425551 ALPK3Q96L96 1907 aa12.72□□□□□ -0.37
TUBA4A-204ENST00000425551 CLRN2A0PK11 232 aa12.71□□□□□ -0.37
TUBA4A-204ENST00000425551 G3V3G9 751 aa12.71□□□□□ -0.37
TUBA4A-204ENST00000425551 IRS4O14654 1257 aaPredicted RBP12.71□□□□□ -0.37
TUBA4A-204ENST00000425551 MAP3K11Q16584 847 aa12.71□□□□□ -0.37
TUBA4A-204ENST00000425551 DCAF8Q5TAQ9 597 aa12.71□□□□□ -0.37
TUBA4A-204ENST00000425551 MTMR10Q9NXD2 777 aa12.71□□□□□ -0.37
TUBA4A-204ENST00000425551 HTATSF1O43719 755 aaKnown RBP12.7□□□□□ -0.38
TUBA4A-204ENST00000425551 TMC4Q7Z404 712 aa12.7□□□□□ -0.38
TUBA4A-204ENST00000425551 PLEKHF1Q96S99 279 aa12.7□□□□□ -0.38
TUBA4A-204ENST00000425551 CDH23Q9H251 3354 aa12.7□□□□□ -0.38
TUBA4A-204ENST00000425551 ZBTB48P10074 688 aaPredicted RBP12.69□□□□□ -0.38
TUBA4A-204ENST00000425551 OPTNQ96CV9 577 aa12.69□□□□□ -0.38
TUBA4A-204ENST00000425551 PRMT6Q96LA8 375 aaPredicted RBP12.69□□□□□ -0.38
TUBA4A-204ENST00000425551 CFAP53Q96M91 514 aa12.69□□□□□ -0.38
TUBA4A-204ENST00000425551 CHPF2Q9P2E5 772 aa12.69□□□□□ -0.38
TUBA4A-204ENST00000425551 JAG2Q9Y219 1238 aa12.69□□□□□ -0.38
TUBA4A-204ENST00000425551 OTOFQ9HC10 1997 aa12.69□□□□□ -0.38
TUBA4A-204ENST00000425551 LAMB1P07942 1786 aa12.69□□□□□ -0.38
TUBA4A-204ENST00000425551 NF2P35240 595 aa12.68□□□□□ -0.38
TUBA4A-204ENST00000425551 INHBEP58166 350 aa12.68□□□□□ -0.38
TUBA4A-204ENST00000425551 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.68□□□□□ -0.38
TUBA4A-204ENST00000425551 ERBB4Q15303 1308 aa12.67□□□□□ -0.38
TUBA4A-204ENST00000425551 CCL5P13501 91 aa12.67□□□□□ -0.38
TUBA4A-204ENST00000425551 HNRNPUQ00839 825 aaKnown RBP eCLIP12.67□□□□□ -0.38
TUBA4A-204ENST00000425551 TAF1CQ15572 869 aaPredicted RBP12.67□□□□□ -0.38
TUBA4A-204ENST00000425551 DIS3LQ8TF46 1054 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms