RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ANKRD45Q5TZF3 282 aa19.19■□□□□ 0.66
SHOX2-202ENST00000425436 FBXO3Q9UK99 471 aa19.19■□□□□ 0.66
SHOX2-202ENST00000425436 LEMD3Q9Y2U8 911 aa19.19■□□□□ 0.66
SHOX2-202ENST00000425436 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.19■□□□□ 0.66
SHOX2-202ENST00000425436 CHD4Q14839 1912 aa19.18■□□□□ 0.66
SHOX2-202ENST00000425436 TFCP2Q12800 502 aa19.18■□□□□ 0.66
SHOX2-202ENST00000425436 TXNRD3Q86VQ6 643 aa19.18■□□□□ 0.66
SHOX2-202ENST00000425436 LARGE2Q8N3Y3 721 aa19.18■□□□□ 0.66
SHOX2-202ENST00000425436 VGLL2Q8N8G2 317 aa19.18■□□□□ 0.66
SHOX2-202ENST00000425436 ZC3H12CQ9C0D7 883 aaKnown RBP19.18■□□□□ 0.66
SHOX2-202ENST00000425436 CEP126Q9P2H0 1117 aa19.18■□□□□ 0.66
SHOX2-202ENST00000425436 EIF5BO60841 1220 aaKnown RBP19.17■□□□□ 0.66
SHOX2-202ENST00000425436 SASH1O94885 1247 aa19.17■□□□□ 0.66
SHOX2-202ENST00000425436 EYA3Q99504 573 aa19.17■□□□□ 0.66
SHOX2-202ENST00000425436 UPF2Q9HAU5 1272 aaKnown RBP19.17■□□□□ 0.66
SHOX2-202ENST00000425436 NOP58Q9Y2X3 529 aaKnown RBP19.17■□□□□ 0.66
SHOX2-202ENST00000425436 APBB1O00213 710 aa19.16■□□□□ 0.66
SHOX2-202ENST00000425436 KIAA2012Q0VF49 1180 aa19.16■□□□□ 0.66
SHOX2-202ENST00000425436 DOK7Q18PE1 504 aa19.16■□□□□ 0.66
SHOX2-202ENST00000425436 COL4A5P29400 1685 aa19.16■□□□□ 0.66
SHOX2-202ENST00000425436 DICER1Q9UPY3 1922 aaKnown RBP19.15■□□□□ 0.66
SHOX2-202ENST00000425436 ERICH6Q7L0X2 663 aa19.15■□□□□ 0.66
SHOX2-202ENST00000425436 UBE4AQ14139 1066 aa19.15■□□□□ 0.66
SHOX2-202ENST00000425436 LNPKQ9C0E8 428 aa19.15■□□□□ 0.66
SHOX2-202ENST00000425436 BCL11AQ9H165 835 aa19.15■□□□□ 0.66
SHOX2-202ENST00000425436 VPS33BQ9H267 617 aa19.15■□□□□ 0.66
SHOX2-202ENST00000425436 DBNDD1Q9H9R9 158 aa19.15■□□□□ 0.66
SHOX2-202ENST00000425436 TIMM10P62072 90 aa19.14■□□□□ 0.65
SHOX2-202ENST00000425436 JDP2Q8WYK2 163 aa19.14■□□□□ 0.65
SHOX2-202ENST00000425436 G3V3G9 751 aa19.13■□□□□ 0.65
SHOX2-202ENST00000425436 FGFR2P21802 821 aa19.13■□□□□ 0.65
SHOX2-202ENST00000425436 PUM3Q15397 648 aaKnown RBP19.13■□□□□ 0.65
SHOX2-202ENST00000425436 DCAF8Q5TAQ9 597 aa19.13■□□□□ 0.65
SHOX2-202ENST00000425436 NIM1KQ8IY84 436 aa19.13■□□□□ 0.65
SHOX2-202ENST00000425436 MED23Q9ULK4 1368 aa19.13■□□□□ 0.65
SHOX2-202ENST00000425436 IRS2Q9Y4H2 1338 aa19.12■□□□□ 0.65
SHOX2-202ENST00000425436 GYG1P46976 350 aa19.12■□□□□ 0.65
SHOX2-202ENST00000425436 MAPK8IP2Q13387 824 aaPredicted RBP19.12■□□□□ 0.65
SHOX2-202ENST00000425436 ATP2B3Q16720 1220 aa19.12■□□□□ 0.65
SHOX2-202ENST00000425436 BMP2KLQ5H9B9 411 aa19.12■□□□□ 0.65
SHOX2-202ENST00000425436 KCNQ5Q9NR82 932 aa19.12■□□□□ 0.65
SHOX2-202ENST00000425436 NEUROD6Q96NK8 337 aa19.11■□□□□ 0.65
SHOX2-202ENST00000425436 YDJCA8MPS7 323 aa19.1■□□□□ 0.65
SHOX2-202ENST00000425436 ECE2O60344 883 aa19.1■□□□□ 0.65
SHOX2-202ENST00000425436 HSP90AB4PQ58FF6 505 aa19.1■□□□□ 0.65
SHOX2-202ENST00000425436 LPIN2Q92539 896 aa19.1■□□□□ 0.65
SHOX2-202ENST00000425436 FAM84BQ96KN1 310 aaPredicted RBP19.1■□□□□ 0.65
SHOX2-202ENST00000425436 IL1RAPL2Q9NP60 686 aa19.1■□□□□ 0.65
SHOX2-202ENST00000425436 ZNRF3Q9ULT6 936 aa19.1■□□□□ 0.65
SHOX2-202ENST00000425436 TIAM2Q8IVF5 1701 aa19.1■□□□□ 0.65
SHOX2-202ENST00000425436 A0A1B0GUL7 405 aa19.1■□□□□ 0.65
SHOX2-202ENST00000425436 IFIT1P09914 478 aaKnown RBP19.1■□□□□ 0.65
SHOX2-202ENST00000425436 SLC5A1P13866 664 aa19.1■□□□□ 0.65
SHOX2-202ENST00000425436 ADORA1P30542 326 aa19.1■□□□□ 0.65
SHOX2-202ENST00000425436 C15orf52Q6ZUT6 534 aaKnown RBP19.1■□□□□ 0.65
SHOX2-202ENST00000425436 RHPN1Q8TCX5 695 aa19.1■□□□□ 0.65
SHOX2-202ENST00000425436 AKAP2Q9Y2D5 859 aa19.1■□□□□ 0.65
SHOX2-202ENST00000425436 FZD9O00144 591 aa19.09■□□□□ 0.65
SHOX2-202ENST00000425436 RAB11FIP3O75154 756 aa19.09■□□□□ 0.65
SHOX2-202ENST00000425436 RAD17O75943 681 aa19.09■□□□□ 0.65
SHOX2-202ENST00000425436 BCAMP50895 628 aa19.09■□□□□ 0.65
SHOX2-202ENST00000425436 ERC1Q8IUD2 1116 aa19.09■□□□□ 0.65
SHOX2-202ENST00000425436 ZNF541Q9H0D2 1346 aa19.08■□□□□ 0.65
SHOX2-202ENST00000425436 SMARCA5O60264 1052 aaPredicted RBP19.08■□□□□ 0.64
SHOX2-202ENST00000425436 HIBADHP31937 336 aaKnown RBP19.08■□□□□ 0.64
SHOX2-202ENST00000425436 TNNI3KQ59H18 835 aa19.08■□□□□ 0.64
SHOX2-202ENST00000425436 COA1Q9GZY4 146 aa19.08■□□□□ 0.64
SHOX2-202ENST00000425436 CD209Q9NNX6 404 aa19.08■□□□□ 0.64
SHOX2-202ENST00000425436 FPGT-TNNI3KV9GXZ4 949 aa19.08■□□□□ 0.64
SHOX2-202ENST00000425436 EIF6P56537 245 aaKnown RBP19.07■□□□□ 0.64
SHOX2-202ENST00000425436 CXCL9Q07325 125 aa19.07■□□□□ 0.64
SHOX2-202ENST00000425436 CAVIN4Q5BKX8 364 aa19.07■□□□□ 0.64
SHOX2-202ENST00000425436 ZNF804AQ7Z570 1209 aa19.07■□□□□ 0.64
SHOX2-202ENST00000425436 VPS37DQ86XT2 251 aa19.07■□□□□ 0.64
SHOX2-202ENST00000425436 EAF2Q96CJ1 260 aaPredicted RBP19.07■□□□□ 0.64
SHOX2-202ENST00000425436 KIF1BPQ96EK5 621 aa19.07■□□□□ 0.64
SHOX2-202ENST00000425436 XAGE2Q96GT9 111 aa19.07■□□□□ 0.64
SHOX2-202ENST00000425436 CCDC8Q9H0W5 538 aaPredicted RBP19.07■□□□□ 0.64
SHOX2-202ENST00000425436 IQSEC3Q9UPP2 1182 aaPredicted RBP19.07■□□□□ 0.64
SHOX2-202ENST00000425436 SCN9AQ15858 1988 aa19.07■□□□□ 0.64
SHOX2-202ENST00000425436 PODNQ7Z5L7 613 aa19.06■□□□□ 0.64
SHOX2-202ENST00000425436 FBXO33Q7Z6M2 555 aa19.06■□□□□ 0.64
SHOX2-202ENST00000425436 GJA3Q9Y6H8 435 aa19.06■□□□□ 0.64
SHOX2-202ENST00000425436 DDNO94850 711 aaPredicted RBP19.05■□□□□ 0.64
SHOX2-202ENST00000425436 YY1P25490 414 aa19.05■□□□□ 0.64
SHOX2-202ENST00000425436 ZNF526Q8TF50 670 aaPredicted RBP19.05■□□□□ 0.64
SHOX2-202ENST00000425436 FBXW7Q969H0 707 aa19.05■□□□□ 0.64
SHOX2-202ENST00000425436 LRRCC1Q9C099 1032 aa19.05■□□□□ 0.64
SHOX2-202ENST00000425436 GPR108Q9NPR9 543 aa19.05■□□□□ 0.64
SHOX2-202ENST00000425436 DAXXQ9UER7 740 aaPredicted RBP19.05■□□□□ 0.64
SHOX2-202ENST00000425436 JAG2Q9Y219 1238 aa19.05■□□□□ 0.64
SHOX2-202ENST00000425436 ZNF609O15014 1411 aa19.05■□□□□ 0.64
SHOX2-202ENST00000425436 PHKA1P46020 1223 aa19.05■□□□□ 0.64
SHOX2-202ENST00000425436 GORABQ5T7V8 394 aa19.05■□□□□ 0.64
SHOX2-202ENST00000425436 AACSQ86V21 672 aa19.05■□□□□ 0.64
SHOX2-202ENST00000425436 DBNDD2Q9BQY9 259 aa19.05■□□□□ 0.64
SHOX2-202ENST00000425436 TLR7Q9NYK1 1049 aaKnown RBP19.05■□□□□ 0.64
SHOX2-202ENST00000425436 PSMD14O00487 310 aa19.04■□□□□ 0.64
SHOX2-202ENST00000425436 IL1R1P14778 569 aa19.04■□□□□ 0.64
SHOX2-202ENST00000425436 CIAPIN1Q6FI81 312 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms