RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 OGFOD1Q8N543 542 aa20.12■□□□□ 0.81
RPUSD3-204ENST00000424438 MYD88Q99836 296 aa20.12■□□□□ 0.81
RPUSD3-204ENST00000424438 BSDC1Q9NW68 430 aaPredicted RBP20.12■□□□□ 0.81
RPUSD3-204ENST00000424438 COL1A1P02452 1464 aaPredicted RBP20.11■□□□□ 0.81
RPUSD3-204ENST00000424438 GPR25O00155 361 aa20.11■□□□□ 0.81
RPUSD3-204ENST00000424438 DDX58O95786 925 aaKnown RBP20.11■□□□□ 0.81
RPUSD3-204ENST00000424438 GNAI1P63096 354 aa20.11■□□□□ 0.81
RPUSD3-204ENST00000424438 SREBF2Q12772 1141 aa20.11■□□□□ 0.81
RPUSD3-204ENST00000424438 PHAXQ9H814 394 aaKnown RBP20.11■□□□□ 0.81
RPUSD3-204ENST00000424438 WNT10BO00744 389 aa20.1■□□□□ 0.81
RPUSD3-204ENST00000424438 CTSWP56202 376 aa20.1■□□□□ 0.81
RPUSD3-204ENST00000424438 COA1Q9GZY4 146 aa20.1■□□□□ 0.81
RPUSD3-204ENST00000424438 UBE2Q2LH0YL09 131 aa20.09■□□□□ 0.81
RPUSD3-204ENST00000424438 NBPF9Q3BBW0 867 aa20.09■□□□□ 0.81
RPUSD3-204ENST00000424438 MINPP1Q9UNW1 487 aa20.09■□□□□ 0.81
RPUSD3-204ENST00000424438 UNCXA6NJT0 531 aa20.08■□□□□ 0.81
RPUSD3-204ENST00000424438 ALDH1A1P00352 501 aa20.08■□□□□ 0.81
RPUSD3-204ENST00000424438 LDLRAD1Q5T700 205 aa20.08■□□□□ 0.81
RPUSD3-204ENST00000424438 MOB2Q70IA6 237 aa20.08■□□□□ 0.81
RPUSD3-204ENST00000424438 APOBEC3FQ8IUX4 373 aaKnown RBP20.08■□□□□ 0.81
RPUSD3-204ENST00000424438 TTLL11Q8NHH1 800 aa20.08■□□□□ 0.81
RPUSD3-204ENST00000424438 ZBED3Q96IU2 234 aaPredicted RBP20.08■□□□□ 0.81
RPUSD3-204ENST00000424438 ADAMTS8Q9UP79 889 aa20.08■□□□□ 0.81
RPUSD3-204ENST00000424438 LEMD3Q9Y2U8 911 aa20.08■□□□□ 0.81
RPUSD3-204ENST00000424438 SPEF2Q9C093 1822 aa20.07■□□□□ 0.8
RPUSD3-204ENST00000424438 CCT4P50991 539 aaKnown RBP20.07■□□□□ 0.8
RPUSD3-204ENST00000424438 INHBEP58166 350 aa20.07■□□□□ 0.8
RPUSD3-204ENST00000424438 CCDC30Q5VVM6 783 aa20.07■□□□□ 0.8
RPUSD3-204ENST00000424438 ARMC9Q7Z3E5 817 aa20.07■□□□□ 0.8
RPUSD3-204ENST00000424438 FKTNO75072 461 aa20.06■□□□□ 0.8
RPUSD3-204ENST00000424438 FXR1P51114 621 aaKnown RBP eCLIP20.06■□□□□ 0.8
RPUSD3-204ENST00000424438 ECM29Q5VYK3 1845 aa20.06■□□□□ 0.8
RPUSD3-204ENST00000424438 RBBP6Q7Z6E9 1792 aaKnown RBP20.06■□□□□ 0.8
RPUSD3-204ENST00000424438 MAP3K11Q16584 847 aa20.05■□□□□ 0.8
RPUSD3-204ENST00000424438 INTS3Q68E01 1043 aaKnown RBP20.05■□□□□ 0.8
RPUSD3-204ENST00000424438 KSR2Q6VAB6 950 aa20.05■□□□□ 0.8
RPUSD3-204ENST00000424438 IGKV5-2P06315 115 aa20.04■□□□□ 0.8
RPUSD3-204ENST00000424438 TTLL12Q14166 644 aaPredicted RBP20.04■□□□□ 0.8
RPUSD3-204ENST00000424438 SPRYD7Q5W111 196 aa20.04■□□□□ 0.8
RPUSD3-204ENST00000424438 KIAA0100Q14667 2235 aaKnown RBP20.03■□□□□ 0.8
RPUSD3-204ENST00000424438 PTPN12Q05209 780 aaKnown RBP20.03■□□□□ 0.8
RPUSD3-204ENST00000424438 CCDC85AQ96PX6 553 aaPredicted RBP20.03■□□□□ 0.8
RPUSD3-204ENST00000424438 PLA2G12BQ9BX93 195 aa20.03■□□□□ 0.8
RPUSD3-204ENST00000424438 GREM2Q9H772 168 aa20.03■□□□□ 0.8
RPUSD3-204ENST00000424438 MAP3K2Q9Y2U5 619 aa20.03■□□□□ 0.8
RPUSD3-204ENST00000424438 PPP2R3BQ9Y5P8 575 aa20.03■□□□□ 0.8
RPUSD3-204ENST00000424438 CACNA1FO60840 1977 aa20.03■□□□□ 0.8
RPUSD3-204ENST00000424438 MANSC4A6NHS7 340 aaPredicted RBP20.02■□□□□ 0.8
RPUSD3-204ENST00000424438 ZBTB48P10074 688 aaPredicted RBP20.02■□□□□ 0.8
RPUSD3-204ENST00000424438 NEXNQ0ZGT2 675 aa20.02■□□□□ 0.8
RPUSD3-204ENST00000424438 PRAMEF18Q5VWM3 479 aa20.02■□□□□ 0.8
RPUSD3-204ENST00000424438 MTMR14Q8NCE2 650 aa20.02■□□□□ 0.8
RPUSD3-204ENST00000424438 ANKRD2Q9GZV1 360 aa20.02■□□□□ 0.8
RPUSD3-204ENST00000424438 WTIPA6NIX2 430 aaPredicted RBP20.01■□□□□ 0.79
RPUSD3-204ENST00000424438 H7C1W4 665 aa20.01■□□□□ 0.79
RPUSD3-204ENST00000424438 TTLL5Q6EMB2 1281 aa20.01■□□□□ 0.79
RPUSD3-204ENST00000424438 C8orf58Q8NAV2 365 aa20.01■□□□□ 0.79
RPUSD3-204ENST00000424438 HTTP42858 3142 aa20■□□□□ 0.79
RPUSD3-204ENST00000424438 PI4KAP2A4QPH2 592 aa20■□□□□ 0.79
RPUSD3-204ENST00000424438 IGHMBP2P38935 993 aaKnown RBP20■□□□□ 0.79
RPUSD3-204ENST00000424438 C15orf52Q6ZUT6 534 aaKnown RBP20■□□□□ 0.79
RPUSD3-204ENST00000424438 TXNRD3Q86VQ6 643 aa20■□□□□ 0.79
RPUSD3-204ENST00000424438 PI4KAP1Q8N8J0 262 aa20■□□□□ 0.79
RPUSD3-204ENST00000424438 JARID2Q92833 1246 aaPredicted RBP20■□□□□ 0.79
RPUSD3-204ENST00000424438 ZNF804BA4D1E1 1349 aa20■□□□□ 0.79
RPUSD3-204ENST00000424438 NEURL1BA8MQ27 555 aa19.99■□□□□ 0.79
RPUSD3-204ENST00000424438 ELL2O00472 640 aaPredicted RBP19.99■□□□□ 0.79
RPUSD3-204ENST00000424438 SASH1O94885 1247 aa19.99■□□□□ 0.79
RPUSD3-204ENST00000424438 MKRN3Q13064 507 aaKnown RBP19.99■□□□□ 0.79
RPUSD3-204ENST00000424438 MXD3Q9BW11 206 aa19.99■□□□□ 0.79
RPUSD3-204ENST00000424438 SCAF8Q9UPN6 1271 aaKnown RBP19.99■□□□□ 0.79
RPUSD3-204ENST00000424438 TRIM17Q9Y577 477 aa19.99■□□□□ 0.79
RPUSD3-204ENST00000424438 POTEFA5A3E0 1075 aa19.98■□□□□ 0.79
RPUSD3-204ENST00000424438 APAF1O14727 1248 aa19.98■□□□□ 0.79
RPUSD3-204ENST00000424438 FKBP1AP62942 108 aaKnown RBP19.98■□□□□ 0.79
RPUSD3-204ENST00000424438 CSF1RP07333 972 aa19.97■□□□□ 0.79
RPUSD3-204ENST00000424438 IFNL1Q8IU54 200 aa19.97■□□□□ 0.79
RPUSD3-204ENST00000424438 DEFB129Q9H1M3 183 aa19.97■□□□□ 0.79
RPUSD3-204ENST00000424438 R3HDMLQ9H3Y0 253 aa19.97■□□□□ 0.79
RPUSD3-204ENST00000424438 ANGEL1Q9UNK9 670 aaKnown RBP19.97■□□□□ 0.79
RPUSD3-204ENST00000424438 PPP1R12BO60237 982 aaPredicted RBP19.96■□□□□ 0.79
RPUSD3-204ENST00000424438 KIAA0825Q8IV33 1275 aa19.96■□□□□ 0.79
RPUSD3-204ENST00000424438 SLC10A4Q96EP9 437 aa19.96■□□□□ 0.79
RPUSD3-204ENST00000424438 STK31Q9BXU1 1019 aa19.96■□□□□ 0.79
RPUSD3-204ENST00000424438 IRS2Q9Y4H2 1338 aa19.96■□□□□ 0.79
RPUSD3-204ENST00000424438 SSC5DA1L4H1 1573 aa19.95■□□□□ 0.78
RPUSD3-204ENST00000424438 A0A1B0GUL6 1792 aa19.95■□□□□ 0.78
RPUSD3-204ENST00000424438 ITGA6P23229 1130 aa19.95■□□□□ 0.78
RPUSD3-204ENST00000424438 DLGAP5Q15398 846 aa19.95■□□□□ 0.78
RPUSD3-204ENST00000424438 OTOP1Q7RTM1 612 aa19.95■□□□□ 0.78
RPUSD3-204ENST00000424438 UBE3BQ7Z3V4 1068 aa19.95■□□□□ 0.78
RPUSD3-204ENST00000424438 MPHOSPH8Q99549 860 aa19.95■□□□□ 0.78
RPUSD3-204ENST00000424438 CD209Q9NNX6 404 aa19.95■□□□□ 0.78
RPUSD3-204ENST00000424438 CASP7P55210 303 aa19.94■□□□□ 0.78
RPUSD3-204ENST00000424438 GTF2IP78347 998 aa19.94■□□□□ 0.78
RPUSD3-204ENST00000424438 CWF19L2Q2TBE0 894 aaKnown RBP19.94■□□□□ 0.78
RPUSD3-204ENST00000424438 SUPT20HL1Q3ZLR7 823 aa19.94■□□□□ 0.78
RPUSD3-204ENST00000424438 FBXW7Q969H0 707 aa19.94■□□□□ 0.78
RPUSD3-204ENST00000424438 ERO1AQ96HE7 468 aa19.94■□□□□ 0.78
RPUSD3-204ENST00000424438 WNK4Q96J92 1243 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms