RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 ADAMTSL1Q8N6G6 1762 aa23.35■■□□□ 1.33
PRNP-202ENST00000424424 USP17L3A6NCW0 530 aa23.35■■□□□ 1.33
PRNP-202ENST00000424424 USP17L4A6NCW7 530 aa23.35■■□□□ 1.33
PRNP-202ENST00000424424 USP17L1Q7RTZ2 530 aa23.35■■□□□ 1.33
PRNP-202ENST00000424424 TXNRD3Q86VQ6 643 aa23.35■■□□□ 1.33
PRNP-202ENST00000424424 RIPOR2Q9Y4F9 1068 aa23.35■■□□□ 1.33
PRNP-202ENST00000424424 UBE4AQ14139 1066 aa23.34■■□□□ 1.33
PRNP-202ENST00000424424 C15orf52Q6ZUT6 534 aaKnown RBP23.34■■□□□ 1.33
PRNP-202ENST00000424424 DZIP1LQ8IYY4 767 aaKnown RBP23.34■■□□□ 1.33
PRNP-202ENST00000424424 TMEM57Q8N5G2 664 aa23.34■■□□□ 1.33
PRNP-202ENST00000424424 SNAP23O00161 211 aa23.33■■□□□ 1.33
PRNP-202ENST00000424424 LRRC24Q50LG9 513 aa23.33■■□□□ 1.33
PRNP-202ENST00000424424 METTL24Q5JXM2 366 aa23.33■■□□□ 1.33
PRNP-202ENST00000424424 RSBN1LQ6PCB5 846 aaPredicted RBP23.33■■□□□ 1.33
PRNP-202ENST00000424424 ZNF804AQ7Z570 1209 aa23.33■■□□□ 1.33
PRNP-202ENST00000424424 MICALL2Q8IY33 904 aa23.33■■□□□ 1.33
PRNP-202ENST00000424424 KLHDC4Q8TBB5 520 aa23.33■■□□□ 1.33
PRNP-202ENST00000424424 MS4A1P11836 297 aa23.32■■□□□ 1.32
PRNP-202ENST00000424424 KLRK1P26718 216 aa23.32■■□□□ 1.32
PRNP-202ENST00000424424 AGBL3Q8NEM8 1001 aa23.32■■□□□ 1.32
PRNP-202ENST00000424424 FBXW7Q969H0 707 aa23.32■■□□□ 1.32
PRNP-202ENST00000424424 GNAI2P04899 355 aa23.31■■□□□ 1.32
PRNP-202ENST00000424424 RFX5P48382 616 aaPredicted RBP23.31■■□□□ 1.32
PRNP-202ENST00000424424 CD209Q9NNX6 404 aa23.31■■□□□ 1.32
PRNP-202ENST00000424424 FBXO3Q9UK99 471 aa23.31■■□□□ 1.32
PRNP-202ENST00000424424 EYA2O00167 538 aa23.3■■□□□ 1.32
PRNP-202ENST00000424424 PTPN12Q05209 780 aaKnown RBP23.3■■□□□ 1.32
PRNP-202ENST00000424424 STRIP1Q5VSL9 837 aa23.3■■□□□ 1.32
PRNP-202ENST00000424424 MAP1SQ66K74 1059 aaPredicted RBP23.3■■□□□ 1.32
PRNP-202ENST00000424424 CNTROBQ8N137 903 aa23.3■■□□□ 1.32
PRNP-202ENST00000424424 RCAN3Q9UKA8 241 aa23.3■■□□□ 1.32
PRNP-202ENST00000424424 ZNF609O15014 1411 aa23.29■■□□□ 1.32
PRNP-202ENST00000424424 PDE8BO95263 885 aa23.29■■□□□ 1.32
PRNP-202ENST00000424424 TTLL5Q6EMB2 1281 aa23.29■■□□□ 1.32
PRNP-202ENST00000424424 ITPRIPQ8IWB1 547 aa23.29■■□□□ 1.32
PRNP-202ENST00000424424 DNAJC5GQ8N7S2 189 aa23.29■■□□□ 1.32
PRNP-202ENST00000424424 MYO3BQ8WXR4 1341 aa23.29■■□□□ 1.32
PRNP-202ENST00000424424 IRS2Q9Y4H2 1338 aa23.29■■□□□ 1.32
PRNP-202ENST00000424424 ZC3H15Q8WU90 426 aaKnown RBP23.28■■□□□ 1.32
PRNP-202ENST00000424424 SHTN1A0MZ66 631 aa23.27■■□□□ 1.32
PRNP-202ENST00000424424 GTF2IP78347 998 aa23.27■■□□□ 1.32
PRNP-202ENST00000424424 DACT2Q5SW24 774 aa23.27■■□□□ 1.32
PRNP-202ENST00000424424 SAMD7Q7Z3H4 446 aa23.27■■□□□ 1.32
PRNP-202ENST00000424424 SIL1Q9H173 461 aa23.27■■□□□ 1.32
PRNP-202ENST00000424424 ZNF646O15015 1829 aaPredicted RBP23.26■■□□□ 1.31
PRNP-202ENST00000424424 SRGAP3O43295 1099 aa23.26■■□□□ 1.31
PRNP-202ENST00000424424 CIAO1O76071 339 aa23.26■■□□□ 1.31
PRNP-202ENST00000424424 ITGBL1O95965 494 aaPredicted RBP23.26■■□□□ 1.31
PRNP-202ENST00000424424 USP17L8P0C7I0 530 aa23.26■■□□□ 1.31
PRNP-202ENST00000424424 IL1R1P14778 569 aa23.26■■□□□ 1.31
PRNP-202ENST00000424424 HIBADHP31937 336 aaKnown RBP23.26■■□□□ 1.31
PRNP-202ENST00000424424 MTX1Q13505 466 aa23.26■■□□□ 1.31
PRNP-202ENST00000424424 RBM26Q5T8P6 1007 aaKnown RBP23.26■■□□□ 1.31
PRNP-202ENST00000424424 TRPM4Q8TD43 1214 aa23.26■■□□□ 1.31
PRNP-202ENST00000424424 HIRAP54198 1017 aaPredicted RBP23.25■■□□□ 1.31
PRNP-202ENST00000424424 TBC1D10BQ4KMP7 808 aaPredicted RBP23.25■■□□□ 1.31
PRNP-202ENST00000424424 CAVIN4Q5BKX8 364 aa23.25■■□□□ 1.31
PRNP-202ENST00000424424 VPS37DQ86XT2 251 aa23.25■■□□□ 1.31
PRNP-202ENST00000424424 OGFOD1Q8N543 542 aa23.25■■□□□ 1.31
PRNP-202ENST00000424424 VGLL2Q8N8G2 317 aa23.25■■□□□ 1.31
PRNP-202ENST00000424424 GMLQ99445 158 aa23.25■■□□□ 1.31
PRNP-202ENST00000424424 COPRSQ9NQ92 184 aa23.25■■□□□ 1.31
PRNP-202ENST00000424424 PASKQ96RG2 1323 aa23.25■■□□□ 1.31
PRNP-202ENST00000424424 IFIT1P09914 478 aaKnown RBP23.24■■□□□ 1.31
PRNP-202ENST00000424424 RLBP1P12271 317 aa23.24■■□□□ 1.31
PRNP-202ENST00000424424 IL15P40933 162 aaPredicted RBP23.24■■□□□ 1.31
PRNP-202ENST00000424424 MMP14P50281 582 aa23.24■■□□□ 1.31
PRNP-202ENST00000424424 PUM3Q15397 648 aaKnown RBP23.24■■□□□ 1.31
PRNP-202ENST00000424424 KIF4BQ2VIQ3 1234 aa23.24■■□□□ 1.31
PRNP-202ENST00000424424 CEP126Q9P2H0 1117 aa23.24■■□□□ 1.31
PRNP-202ENST00000424424 PGAP2Q9UHJ9 254 aa23.24■■□□□ 1.31
PRNP-202ENST00000424424 GYG1P46976 350 aa23.23■■□□□ 1.31
PRNP-202ENST00000424424 ZNF280AP59817 542 aaPredicted RBP23.23■■□□□ 1.31
PRNP-202ENST00000424424 ATG9AQ7Z3C6 839 aa23.23■■□□□ 1.31
PRNP-202ENST00000424424 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.23■■□□□ 1.31
PRNP-202ENST00000424424 FAM84BQ96KN1 310 aaPredicted RBP23.23■■□□□ 1.31
PRNP-202ENST00000424424 PA2G4Q9UQ80 394 aaKnown RBP23.23■■□□□ 1.31
PRNP-202ENST00000424424 ZBTB7BO15156 539 aaPredicted RBP23.22■■□□□ 1.31
PRNP-202ENST00000424424 SLC5A1P13866 664 aa23.22■■□□□ 1.31
PRNP-202ENST00000424424 PANK1Q8TE04 598 aa23.22■■□□□ 1.31
PRNP-202ENST00000424424 YTHDC1Q96MU7 727 aaKnown RBP23.22■■□□□ 1.31
PRNP-202ENST00000424424 MXD3Q9BW11 206 aa23.22■■□□□ 1.31
PRNP-202ENST00000424424 HDAC9Q9UKV0 1011 aa23.22■■□□□ 1.31
PRNP-202ENST00000424424 TRPM7Q96QT4 1865 aa23.22■■□□□ 1.31
PRNP-202ENST00000424424 POLR2AP24928 1970 aaKnown RBP23.21■■□□□ 1.31
PRNP-202ENST00000424424 SASH1O94885 1247 aa23.21■■□□□ 1.31
PRNP-202ENST00000424424 HTRA3P83110 453 aa23.21■■□□□ 1.31
PRNP-202ENST00000424424 TDRD7Q8NHU6 1098 aaKnown RBP23.21■■□□□ 1.31
PRNP-202ENST00000424424 LPIN2Q92539 896 aa23.21■■□□□ 1.31
PRNP-202ENST00000424424 MYOZ2Q9NPC6 264 aa23.21■■□□□ 1.31
PRNP-202ENST00000424424 CREBZFQ9NS37 354 aa23.21■■□□□ 1.31
PRNP-202ENST00000424424 FRAT2O75474 233 aaPredicted RBP23.2■■□□□ 1.3
PRNP-202ENST00000424424 EGFRP00533 1210 aa23.2■■□□□ 1.3
PRNP-202ENST00000424424 FKBP1AP62942 108 aaKnown RBP23.2■■□□□ 1.3
PRNP-202ENST00000424424 CDC37L1Q7L3B6 337 aa23.2■■□□□ 1.3
PRNP-202ENST00000424424 FBXO33Q7Z6M2 555 aa23.2■■□□□ 1.3
PRNP-202ENST00000424424 DCPSQ96C86 337 aaKnown RBP23.2■■□□□ 1.3
PRNP-202ENST00000424424 TMEM88BA6NKF7 163 aa23.19■■□□□ 1.3
PRNP-202ENST00000424424 FGFR2P21802 821 aa23.19■■□□□ 1.3
PRNP-202ENST00000424424 KIAA0825Q8IV33 1275 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms