RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 DPP7Q9UHL4 492 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 ATP11BQ9Y2G3 1177 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 STRCP1A6NGW2 1772 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 ANKRD18BA2A2Z9 1011 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 ZBED4O75132 1171 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 CETPP11597 493 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 AMER1Q5JTC6 1135 aaPredicted RBP4.22□□□□□ -1.73
TOP2A-201ENST00000423485 EPHA10Q5JZY3 1008 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 ZSCAN25Q6NSZ9 544 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 DDX42Q86XP3 938 aaKnown RBP eCLIP4.22□□□□□ -1.73
TOP2A-201ENST00000423485 CDCA7LQ96GN5 454 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 RTEL1Q9NZ71 1219 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 U3KPZ7 1027 aaPredicted RBP4.22□□□□□ -1.73
TOP2A-201ENST00000423485 NRKQ7Z2Y5 1582 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 KIAA1107Q9UPP5 1409 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.22□□□□□ -1.73
TOP2A-201ENST00000423485 SMC1AQ14683 1233 aaKnown RBP4.22□□□□□ -1.73
TOP2A-201ENST00000423485 PARP10Q53GL7 1025 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 MFSD14AQ96MC6 490 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 SCAF11Q99590 1463 aaKnown RBP4.22□□□□□ -1.73
TOP2A-201ENST00000423485 ZKSCAN1P17029 563 aaPredicted RBP4.22□□□□□ -1.73
TOP2A-201ENST00000423485 KIAA1841Q6NSI8 718 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 LRRC69Q6ZNQ3 347 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 BRINP3Q76B58 766 aa4.22□□□□□ -1.73
TOP2A-201ENST00000423485 POP1Q99575 1024 aaKnown RBP4.22□□□□□ -1.73
TOP2A-201ENST00000423485 XIRP1Q702N8 1843 aaKnown RBP4.22□□□□□ -1.73
TOP2A-201ENST00000423485 SFI1A8K8P3 1242 aa4.21□□□□□ -1.73
TOP2A-201ENST00000423485 C21orf2O43822 256 aa4.21□□□□□ -1.73
TOP2A-201ENST00000423485 MYL6BP14649 208 aa4.21□□□□□ -1.73
TOP2A-201ENST00000423485 LDHAL6AQ6ZMR3 332 aa4.21□□□□□ -1.73
TOP2A-201ENST00000423485 SLKQ9H2G2 1235 aaPredicted RBP4.21□□□□□ -1.73
TOP2A-201ENST00000423485 ADARB2Q9NS39 739 aaKnown RBP4.21□□□□□ -1.73
TOP2A-201ENST00000423485 SERPINB2P05120 415 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 MCCP23508 829 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 TNFAIP2Q03169 654 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 IDI1Q13907 227 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 CCDC96Q2M329 555 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 C7orf61Q8IZ16 206 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 PCDHB13Q9Y5F0 798 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 PTCH1Q13635 1447 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 NPATQ14207 1427 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 GTF2A2P52657 109 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 RNF180Q86T96 592 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 CMTR1Q8N1G2 835 aaKnown RBP4.21□□□□□ -1.74
TOP2A-201ENST00000423485 TMEM199Q8N511 208 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 PDILTQ8N807 584 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 A2ML1A8K2U0 1454 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 PLEKHG3A1L390 1219 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 MAP2K2P36507 400 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 APOBRQ0VD83 1088 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 HAUS6Q7Z4H7 955 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 PNMA2Q9UL42 364 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 EDARQ9UNE0 448 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 OVOS2A0A0G2JMS6 1433 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 OVOS2A0A0J9YW53 1432 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 OVOS2Q6IE36 1432 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 KIAA1210Q9ULL0 1709 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 MYO3BQ8WXR4 1341 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 MFAP1P55081 439 aaKnown RBP4.21□□□□□ -1.74
TOP2A-201ENST00000423485 DDX10Q13206 875 aaKnown RBP4.21□□□□□ -1.74
TOP2A-201ENST00000423485 SNAPC2Q13487 334 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 USP50Q70EL3 339 aaPredicted RBP4.21□□□□□ -1.74
TOP2A-201ENST00000423485 SKA1Q96BD8 255 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 SPATA32Q96LK8 384 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 TANGO6Q9C0B7 1094 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 ARHGEF10LQ9HCE6 1279 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 PPIP5K1Q6PFW1 1433 aa4.21□□□□□ -1.74
TOP2A-201ENST00000423485 NALCNQ8IZF0 1738 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 NSUN7Q8NE18 718 aaKnown RBP4.2□□□□□ -1.74
TOP2A-201ENST00000423485 IGFLR1Q9H665 355 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 COPRSQ9NQ92 184 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 TRPM2O94759 1503 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 NEURL4Q96JN8 1562 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 NOP56O00567 594 aaKnown RBP4.2□□□□□ -1.74
TOP2A-201ENST00000423485 DPYDQ12882 1025 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 CCDC157Q569K6 752 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 COLEC12Q5KU26 742 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 SYNE4Q8N205 404 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 BRMS1Q9HCU9 246 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 CREBZFQ9NS37 354 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 AKAP7Q9P0M2 348 aaPredicted RBP4.2□□□□□ -1.74
TOP2A-201ENST00000423485 N4BP2Q86UW6 1770 aaPredicted RBP4.2□□□□□ -1.74
TOP2A-201ENST00000423485 CSPG5O95196 566 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 RALBP1Q15311 655 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 RGMBQ6NW40 437 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 CKAP2LQ8IYA6 745 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 ELF1P32519 619 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 GNAI1P63096 354 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 CBX1P83916 185 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 AMPD2Q01433 879 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 SFSWAPQ12872 951 aaKnown RBP4.2□□□□□ -1.74
TOP2A-201ENST00000423485 PIK3R5Q8WYR1 880 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 RNPC3Q96LT9 517 aaKnown RBP4.2□□□□□ -1.74
TOP2A-201ENST00000423485 ORAI2Q96SN7 254 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 MKNK2Q9HBH9 465 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 HOMER2Q9NSB8 354 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 MAP3K20Q9NYL2 800 aaKnown RBP4.2□□□□□ -1.74
TOP2A-201ENST00000423485 WDR33Q9C0J8 1336 aaKnown RBP4.2□□□□□ -1.74
TOP2A-201ENST00000423485 NEXMIFQ5QGS0 1516 aa4.2□□□□□ -1.74
TOP2A-201ENST00000423485 A0A0G2JLW4 131 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms