RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 FAM161AQ3B820 660 aa23.57■■□□□ 1.36
SREBF1-206ENST00000423161 FAM9BQ8IZU0 186 aa23.57■■□□□ 1.36
SREBF1-206ENST00000423161 GMLQ99445 158 aa23.57■■□□□ 1.36
SREBF1-206ENST00000423161 GBA2Q9HCG7 927 aaPredicted RBP23.57■■□□□ 1.36
SREBF1-206ENST00000423161 ASTN2O75129 1339 aaPredicted RBP23.57■■□□□ 1.36
SREBF1-206ENST00000423161 SULF1Q8IWU6 871 aa23.56■■□□□ 1.36
SREBF1-206ENST00000423161 SPINK5Q9NQ38 1064 aaPredicted RBP23.56■■□□□ 1.36
SREBF1-206ENST00000423161 USP17L8P0C7I0 530 aa23.55■■□□□ 1.36
SREBF1-206ENST00000423161 C2orf69Q8N8R5 385 aa23.55■■□□□ 1.36
SREBF1-206ENST00000423161 MPHOSPH8Q99549 860 aa23.55■■□□□ 1.36
SREBF1-206ENST00000423161 CSF1RP07333 972 aa23.54■■□□□ 1.36
SREBF1-206ENST00000423161 BRPF1P55201 1214 aaPredicted RBP23.54■■□□□ 1.36
SREBF1-206ENST00000423161 SCARF1Q14162 830 aa23.54■■□□□ 1.36
SREBF1-206ENST00000423161 MYOZ2Q9NPC6 264 aa23.54■■□□□ 1.36
SREBF1-206ENST00000423161 LEMD3Q9Y2U8 911 aa23.54■■□□□ 1.36
SREBF1-206ENST00000423161 CASP8AP2Q9UKL3 1982 aa23.53■■□□□ 1.36
SREBF1-206ENST00000423161 F6X3S4 739 aa23.53■■□□□ 1.36
SREBF1-206ENST00000423161 NOGQ13253 232 aa23.53■■□□□ 1.36
SREBF1-206ENST00000423161 ANGEL2Q5VTE6 544 aaKnown RBP23.53■■□□□ 1.36
SREBF1-206ENST00000423161 FBXW7Q969H0 707 aa23.53■■□□□ 1.36
SREBF1-206ENST00000423161 ANKRD2Q9GZV1 360 aa23.53■■□□□ 1.36
SREBF1-206ENST00000423161 TSKSQ9UJT2 592 aa23.53■■□□□ 1.36
SREBF1-206ENST00000423161 TXNRD3Q86VQ6 643 aa23.52■■□□□ 1.36
SREBF1-206ENST00000423161 COA1Q9GZY4 146 aa23.52■■□□□ 1.36
SREBF1-206ENST00000423161 ZNF804BA4D1E1 1349 aa23.52■■□□□ 1.36
SREBF1-206ENST00000423161 CA12O43570 354 aa23.51■■□□□ 1.35
SREBF1-206ENST00000423161 DACT2Q5SW24 774 aa23.51■■□□□ 1.35
SREBF1-206ENST00000423161 BEND3Q5T5X7 828 aa23.51■■□□□ 1.35
SREBF1-206ENST00000423161 RGMBQ6NW40 437 aa23.51■■□□□ 1.35
SREBF1-206ENST00000423161 CDCA5Q96FF9 252 aa23.51■■□□□ 1.35
SREBF1-206ENST00000423161 AKAP11Q9UKA4 1901 aa23.51■■□□□ 1.35
SREBF1-206ENST00000423161 ANKRD18BA2A2Z9 1011 aa23.5■■□□□ 1.35
SREBF1-206ENST00000423161 ZIC5Q96T25 663 aa23.5■■□□□ 1.35
SREBF1-206ENST00000423161 MXD3Q9BW11 206 aa23.5■■□□□ 1.35
SREBF1-206ENST00000423161 MYO3BQ8WXR4 1341 aa23.5■■□□□ 1.35
SREBF1-206ENST00000423161 PITPNM2Q9BZ72 1349 aa23.5■■□□□ 1.35
SREBF1-206ENST00000423161 PAPPA2Q9BXP8 1791 aa23.5■■□□□ 1.35
SREBF1-206ENST00000423161 KLRK1P26718 216 aa23.49■■□□□ 1.35
SREBF1-206ENST00000423161 KCNJ4P48050 445 aa23.49■■□□□ 1.35
SREBF1-206ENST00000423161 CHRNDQ07001 517 aa23.49■■□□□ 1.35
SREBF1-206ENST00000423161 STRIP1Q5VSL9 837 aa23.49■■□□□ 1.35
SREBF1-206ENST00000423161 FAM155AB1AL88 458 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-206ENST00000423161 FOXO4P98177 505 aa23.48■■□□□ 1.35
SREBF1-206ENST00000423161 CHMP3Q9Y3E7 222 aa23.48■■□□□ 1.35
SREBF1-206ENST00000423161 ZNF157P51786 506 aaPredicted RBP23.47■■□□□ 1.35
SREBF1-206ENST00000423161 IFIT5Q13325 482 aaKnown RBP23.47■■□□□ 1.35
SREBF1-206ENST00000423161 OGFOD1Q8N543 542 aa23.47■■□□□ 1.35
SREBF1-206ENST00000423161 CCDC102AQ96A19 550 aa23.47■■□□□ 1.35
SREBF1-206ENST00000423161 NBPF9Q3BBW0 867 aa23.46■■□□□ 1.35
SREBF1-206ENST00000423161 TTLL5Q6EMB2 1281 aa23.46■■□□□ 1.35
SREBF1-206ENST00000423161 ABHD8Q96I13 439 aa23.46■■□□□ 1.35
SREBF1-206ENST00000423161 GRM8O00222 908 aa23.45■■□□□ 1.34
SREBF1-206ENST00000423161 SCAF8Q9UPN6 1271 aaKnown RBP23.45■■□□□ 1.34
SREBF1-206ENST00000423161 ECM29Q5VYK3 1845 aa23.45■■□□□ 1.34
SREBF1-206ENST00000423161 LMBR1LQ6UX01 489 aa23.44■■□□□ 1.34
SREBF1-206ENST00000423161 HELBQ8NG08 1087 aaPredicted RBP23.44■■□□□ 1.34
SREBF1-206ENST00000423161 ZNF521Q96K83 1311 aa23.43■■□□□ 1.34
SREBF1-206ENST00000423161 SNAP23O00161 211 aa23.43■■□□□ 1.34
SREBF1-206ENST00000423161 WNT10BO00744 389 aa23.43■■□□□ 1.34
SREBF1-206ENST00000423161 TAF5LO75529 589 aa23.43■■□□□ 1.34
SREBF1-206ENST00000423161 SLC10A3P09131 477 aa23.43■■□□□ 1.34
SREBF1-206ENST00000423161 GTF2IP78347 998 aa23.43■■□□□ 1.34
SREBF1-206ENST00000423161 EPHA10Q5JZY3 1008 aa23.43■■□□□ 1.34
SREBF1-206ENST00000423161 SLC4A10Q6U841 1118 aa23.43■■□□□ 1.34
SREBF1-206ENST00000423161 CD209Q9NNX6 404 aa23.43■■□□□ 1.34
SREBF1-206ENST00000423161 C9orf78Q9NZ63 289 aaPredicted RBP23.43■■□□□ 1.34
SREBF1-206ENST00000423161 IRS2Q9Y4H2 1338 aa23.42■■□□□ 1.34
SREBF1-206ENST00000423161 ALDH1L1O75891 902 aa23.42■■□□□ 1.34
SREBF1-206ENST00000423161 MMP14P50281 582 aa23.42■■□□□ 1.34
SREBF1-206ENST00000423161 FKBP1BP68106 108 aa23.42■■□□□ 1.34
SREBF1-206ENST00000423161 KIF23Q02241 960 aaPredicted RBP23.42■■□□□ 1.34
SREBF1-206ENST00000423161 CCDC57Q2TAC2 916 aa23.42■■□□□ 1.34
SREBF1-206ENST00000423161 KIAA0825Q8IV33 1275 aa23.42■■□□□ 1.34
SREBF1-206ENST00000423161 SRCIN1Q9C0H9 1055 aa23.42■■□□□ 1.34
SREBF1-206ENST00000423161 SASH1O94885 1247 aa23.41■■□□□ 1.34
SREBF1-206ENST00000423161 TAF7LQ5H9L4 462 aa23.41■■□□□ 1.34
SREBF1-206ENST00000423161 C15orf52Q6ZUT6 534 aaKnown RBP23.41■■□□□ 1.34
SREBF1-206ENST00000423161 HDAC9Q9UKV0 1011 aa23.41■■□□□ 1.34
SREBF1-206ENST00000423161 PRAMEF18Q5VWM3 479 aa23.4■■□□□ 1.34
SREBF1-206ENST00000423161 ZNF594Q96JF6 807 aaPredicted RBP23.4■■□□□ 1.34
SREBF1-206ENST00000423161 LDHAL6AQ6ZMR3 332 aa23.39■■□□□ 1.33
SREBF1-206ENST00000423161 ZNF804AQ7Z570 1209 aa23.39■■□□□ 1.33
SREBF1-206ENST00000423161 RASAL3Q86YV0 1011 aa23.39■■□□□ 1.33
SREBF1-206ENST00000423161 MOB2Q70IA6 237 aa23.38■■□□□ 1.33
SREBF1-206ENST00000423161 CNNM1Q9NRU3 951 aa23.38■■□□□ 1.33
SREBF1-206ENST00000423161 SAGE1Q9NXZ1 904 aa23.38■■□□□ 1.33
SREBF1-206ENST00000423161 PLIN1O60240 522 aa23.37■■□□□ 1.33
SREBF1-206ENST00000423161 NF2P35240 595 aa23.36■■□□□ 1.33
SREBF1-206ENST00000423161 TTLL12Q14166 644 aaPredicted RBP23.36■■□□□ 1.33
SREBF1-206ENST00000423161 APOBEC3FQ8IUX4 373 aaKnown RBP23.36■■□□□ 1.33
SREBF1-206ENST00000423161 CERS5Q8N5B7 392 aa23.36■■□□□ 1.33
SREBF1-206ENST00000423161 SUCLG2Q96I99 432 aa23.36■■□□□ 1.33
SREBF1-206ENST00000423161 ZBED3Q96IU2 234 aaPredicted RBP23.36■■□□□ 1.33
SREBF1-206ENST00000423161 UBE2Q2LH0YL09 131 aa23.35■■□□□ 1.33
SREBF1-206ENST00000423161 IL1R1P14778 569 aa23.35■■□□□ 1.33
SREBF1-206ENST00000423161 CSRNP1Q96S65 589 aa23.35■■□□□ 1.33
SREBF1-206ENST00000423161 MCOLN1Q9GZU1 580 aa23.35■■□□□ 1.33
SREBF1-206ENST00000423161 RNF186Q9NXI6 227 aa23.35■■□□□ 1.33
SREBF1-206ENST00000423161 ARAP2Q8WZ64 1704 aa23.35■■□□□ 1.33
SREBF1-206ENST00000423161 TRPA1O75762 1119 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms