RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 MCM5P33992 734 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 CEP135Q66GS9 1140 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 KSR2Q6VAB6 950 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 CATIPQ7Z7H3 387 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 TSC1Q92574 1164 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 BCCIPQ9P287 314 aaKnown RBP eCLIP12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 ZKSCAN5Q9Y2L8 839 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 MED14O60244 1454 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 TMEM2Q9UHN6 1383 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 KIAA0754O94854 1291 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 RDXP35241 583 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 MCM6Q14566 821 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 ATP2B3Q16720 1220 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 NCOA5Q9HCD5 579 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 FAM135BQ49AJ0 1406 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 CCDC191Q8NCU4 936 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 FAM200AQ8TCP9 573 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 PLIN2Q99541 437 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 TRIM35Q9UPQ4 493 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 TECPR2O15040 1411 aa12.22□□□□□ -0.45
SEMA4D-208ENST00000422704 ZBTB43O43298 467 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 NBPF7P0C2Y1 421 aaPredicted RBP12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 USP8P40818 1118 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 TYRO3Q06418 890 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 GPIHBP1Q8IV16 184 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 TAF4BQ92750 862 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 NGLY1Q96IV0 654 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 CPS1P31327 1500 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 A0A1B0GVL5 298 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 TFCP2Q12800 502 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 CREB3L3Q68CJ9 461 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 SNX21Q969T3 373 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 MMRN2Q9H8L6 949 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 LGR6Q9HBX8 967 aa12.21□□□□□ -0.45
SEMA4D-208ENST00000422704 CTAGE5O15320 804 aa12.21□□□□□ -0.46
SEMA4D-208ENST00000422704 PKP1Q13835 747 aa12.21□□□□□ -0.46
SEMA4D-208ENST00000422704 MCMDC2Q4G0Z9 681 aa12.21□□□□□ -0.46
SEMA4D-208ENST00000422704 PRPF4BQ13523 1007 aaKnown RBP12.21□□□□□ -0.46
SEMA4D-208ENST00000422704 FAM227BQ96M60 508 aa12.21□□□□□ -0.46
SEMA4D-208ENST00000422704 FER1L4A9Z1Z3 1794 aa12.2□□□□□ -0.46
SEMA4D-208ENST00000422704 PPARDQ03181 441 aa12.2□□□□□ -0.46
SEMA4D-208ENST00000422704 HLTFQ14527 1009 aaKnown RBP eCLIP12.2□□□□□ -0.46
SEMA4D-208ENST00000422704 LINS1Q8NG48 757 aa12.2□□□□□ -0.46
SEMA4D-208ENST00000422704 FAM89AQ96GI7 184 aa12.2□□□□□ -0.46
SEMA4D-208ENST00000422704 PHACTR2O75167 634 aa12.2□□□□□ -0.46
SEMA4D-208ENST00000422704 BICC1Q9H694 974 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-208ENST00000422704 A0A1W2PP64 1363 aa12.2□□□□□ -0.46
SEMA4D-208ENST00000422704 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
SEMA4D-208ENST00000422704 CYP7A1P22680 504 aa12.2□□□□□ -0.46
SEMA4D-208ENST00000422704 JADE2Q9NQC1 790 aa12.2□□□□□ -0.46
SEMA4D-208ENST00000422704 PRC1O43663 620 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 ERLIN2O94905 339 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 PDIA4P13667 645 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 SPECC1Q5M775 1068 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 CCDC148Q8NFR7 591 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 SRRTQ9BXP5 876 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 ATP7BP35670 1465 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 TMCO5BA8MYB1 307 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 GADD45BO75293 160 aaPredicted RBP12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 WTAPQ15007 396 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 WDR78Q5VTH9 848 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 ZNF397Q8NF99 534 aaPredicted RBP12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 PLEKHG1Q9ULL1 1385 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 C3P01024 1663 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 NOP2P46087 812 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 LMAN1P49257 510 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 FKBP15Q5T1M5 1219 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 DHX58Q96C10 678 aa12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 ZNF594Q96JF6 807 aaPredicted RBP12.19□□□□□ -0.46
SEMA4D-208ENST00000422704 ARID5AQ03989 594 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 CCDC178Q5BJE1 867 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 MRPS27Q92552 414 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 ZNF652Q9Y2D9 606 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 SLC4A4Q9Y6R1 1079 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 ERCC3P19447 782 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 RBM25P49756 843 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 KARSQ15046 597 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 SEPT7Q16181 437 aaKnown RBP12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 RNF41Q9H4P4 317 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 MYO6Q9UM54 1294 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 PPIP5K1Q6PFW1 1433 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 KCNA6P17658 529 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 AEBP2Q6ZN18 517 aaPredicted RBP12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 DBNDD2Q9BQY9 259 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 PAG1Q9NWQ8 432 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 PTPDC1A2A3K4 754 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 CCDC24Q8N4L8 307 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 GOPCQ9HD26 462 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 SLIT1O75093 1534 aa12.18□□□□□ -0.46
SEMA4D-208ENST00000422704 AKR1B10O60218 316 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 GCP02774 474 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 CTNNBL1Q8WYA6 563 aaPredicted RBP12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 TRIM47Q96LD4 638 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 LZTFL1Q9NQ48 299 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 TCP11L1Q9NUJ3 509 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 IFNKQ9P0W0 207 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 HMG20BQ9P0W2 317 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 SOS1Q07889 1333 aaPredicted RBP12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 KIF2AO00139 706 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms