RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 WASHC4Q2M389 1173 aa11.51□□□□□ -0.57
PDGFC-202ENST00000422544 LARGE2Q8N3Y3 721 aa11.51□□□□□ -0.57
PDGFC-202ENST00000422544 FBXO3Q9UK99 471 aa11.51□□□□□ -0.57
PDGFC-202ENST00000422544 ZNF804BA4D1E1 1349 aa11.51□□□□□ -0.57
PDGFC-202ENST00000422544 FER1L6Q2WGJ9 1857 aa11.51□□□□□ -0.57
PDGFC-202ENST00000422544 POTECB2RU33 542 aa11.5□□□□□ -0.57
PDGFC-202ENST00000422544 HMMRO75330 724 aa11.5□□□□□ -0.57
PDGFC-202ENST00000422544 KLRK1P26718 216 aa11.5□□□□□ -0.57
PDGFC-202ENST00000422544 KIAA2012Q0VF49 1180 aa11.5□□□□□ -0.57
PDGFC-202ENST00000422544 FSTL1Q12841 308 aa11.5□□□□□ -0.57
PDGFC-202ENST00000422544 EYA3Q99504 573 aa11.5□□□□□ -0.57
PDGFC-202ENST00000422544 ZC3H12CQ9C0D7 883 aaKnown RBP11.5□□□□□ -0.57
PDGFC-202ENST00000422544 VPS33BQ9H267 617 aa11.5□□□□□ -0.57
PDGFC-202ENST00000422544 RRAGCQ9HB90 399 aa11.5□□□□□ -0.57
PDGFC-202ENST00000422544 CEP126Q9P2H0 1117 aa11.5□□□□□ -0.57
PDGFC-202ENST00000422544 CACNA1SQ13698 1873 aa11.5□□□□□ -0.57
PDGFC-202ENST00000422544 PDE8BO95263 885 aa11.49□□□□□ -0.57
PDGFC-202ENST00000422544 TFCP2Q12800 502 aa11.49□□□□□ -0.57
PDGFC-202ENST00000422544 OS9Q13438 667 aaPredicted RBP11.49□□□□□ -0.57
PDGFC-202ENST00000422544 DOK7Q18PE1 504 aa11.49□□□□□ -0.57
PDGFC-202ENST00000422544 TXNRD3Q86VQ6 643 aa11.49□□□□□ -0.57
PDGFC-202ENST00000422544 VGLL2Q8N8G2 317 aa11.49□□□□□ -0.57
PDGFC-202ENST00000422544 NOP58Q9Y2X3 529 aaKnown RBP11.49□□□□□ -0.57
PDGFC-202ENST00000422544 G3V3G9 751 aa11.48□□□□□ -0.57
PDGFC-202ENST00000422544 SASH1O94885 1247 aa11.48□□□□□ -0.57
PDGFC-202ENST00000422544 HSPA1AP0DMV8 641 aaKnown RBP11.48□□□□□ -0.57
PDGFC-202ENST00000422544 HSPA1BP0DMV9 641 aaKnown RBP11.48□□□□□ -0.57
PDGFC-202ENST00000422544 UBE4AQ14139 1066 aa11.48□□□□□ -0.57
PDGFC-202ENST00000422544 DCAF8Q5TAQ9 597 aa11.48□□□□□ -0.57
PDGFC-202ENST00000422544 NIM1KQ8IY84 436 aa11.48□□□□□ -0.57
PDGFC-202ENST00000422544 JDP2Q8WYK2 163 aa11.48□□□□□ -0.57
PDGFC-202ENST00000422544 EXOC6BQ9Y2D4 811 aa11.48□□□□□ -0.57
PDGFC-202ENST00000422544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.48□□□□□ -0.57
PDGFC-202ENST00000422544 SLC34A2O95436 690 aa11.47□□□□□ -0.57
PDGFC-202ENST00000422544 FGFR2P21802 821 aa11.47□□□□□ -0.57
PDGFC-202ENST00000422544 AAMPQ13685 434 aa11.47□□□□□ -0.57
PDGFC-202ENST00000422544 PUM3Q15397 648 aaKnown RBP11.47□□□□□ -0.57
PDGFC-202ENST00000422544 DBNDD1Q9H9R9 158 aa11.47□□□□□ -0.57
PDGFC-202ENST00000422544 LRRC37AA6NMS7 1700 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 DUOX1Q9NRD9 1551 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 MED23Q9ULK4 1368 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 IRS2Q9Y4H2 1338 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 YDJCA8MPS7 323 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 FZD9O00144 591 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 APBB1O00213 710 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 IFIT1P09914 478 aaKnown RBP11.46□□□□□ -0.57
PDGFC-202ENST00000422544 TIMM10P62072 90 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 ATP2B3Q16720 1220 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 HSP90AB4PQ58FF6 505 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 C15orf52Q6ZUT6 534 aaKnown RBP11.46□□□□□ -0.57
PDGFC-202ENST00000422544 LPIN2Q92539 896 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 KCNQ5Q9NR82 932 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 ZNRF3Q9ULT6 936 aa11.46□□□□□ -0.57
PDGFC-202ENST00000422544 ECE2O60344 883 aa11.45□□□□□ -0.58
PDGFC-202ENST00000422544 SLC5A1P13866 664 aa11.45□□□□□ -0.58
PDGFC-202ENST00000422544 GYG1P46976 350 aa11.45□□□□□ -0.58
PDGFC-202ENST00000422544 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
PDGFC-202ENST00000422544 FAM84BQ96KN1 310 aaPredicted RBP11.45□□□□□ -0.58
PDGFC-202ENST00000422544 COA1Q9GZY4 146 aa11.45□□□□□ -0.58
PDGFC-202ENST00000422544 AKAP2Q9Y2D5 859 aa11.45□□□□□ -0.58
PDGFC-202ENST00000422544 COL4A5P29400 1685 aa11.45□□□□□ -0.58
PDGFC-202ENST00000422544 SPEF2Q9C093 1822 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 ZNF541Q9H0D2 1346 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 A0A1B0GUL7 405 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 RAB11FIP3O75154 756 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 RAD17O75943 681 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 ADORA1P30542 326 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 HIBADHP31937 336 aaKnown RBP11.44□□□□□ -0.58
PDGFC-202ENST00000422544 BCAMP50895 628 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 CXCL9Q07325 125 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 CAVIN4Q5BKX8 364 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 ZNF804AQ7Z570 1209 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 FBXO33Q7Z6M2 555 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 ERC1Q8IUD2 1116 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 RHPN1Q8TCX5 695 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 NEUROD6Q96NK8 337 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 BCL11AQ9H165 835 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 DCTPP1Q9H773 170 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 CD209Q9NNX6 404 aa11.44□□□□□ -0.58
PDGFC-202ENST00000422544 ZC3H4Q9UPT8 1303 aaKnown RBP11.43□□□□□ -0.58
PDGFC-202ENST00000422544 DDNO94850 711 aaPredicted RBP11.43□□□□□ -0.58
PDGFC-202ENST00000422544 IGHDP01880 384 aa11.43□□□□□ -0.58
PDGFC-202ENST00000422544 HDAC1Q13547 482 aaPredicted RBP11.43□□□□□ -0.58
PDGFC-202ENST00000422544 TNNI3KQ59H18 835 aa11.43□□□□□ -0.58
PDGFC-202ENST00000422544 CIAPIN1Q6FI81 312 aa11.43□□□□□ -0.58
PDGFC-202ENST00000422544 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
PDGFC-202ENST00000422544 PODNQ7Z5L7 613 aa11.43□□□□□ -0.58
PDGFC-202ENST00000422544 VPS37DQ86XT2 251 aa11.43□□□□□ -0.58
PDGFC-202ENST00000422544 KIF1BPQ96EK5 621 aa11.43□□□□□ -0.58
PDGFC-202ENST00000422544 XAGE2Q96GT9 111 aa11.43□□□□□ -0.58
PDGFC-202ENST00000422544 IL1RAPL2Q9NP60 686 aa11.43□□□□□ -0.58
PDGFC-202ENST00000422544 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
PDGFC-202ENST00000422544 FPGT-TNNI3KV9GXZ4 949 aa11.43□□□□□ -0.58
PDGFC-202ENST00000422544 LTBP1Q14766 1721 aa11.43□□□□□ -0.58
PDGFC-202ENST00000422544 ADAMTSL1Q8N6G6 1762 aa11.42□□□□□ -0.58
PDGFC-202ENST00000422544 GLTPD2A6NH11 291 aa11.42□□□□□ -0.58
PDGFC-202ENST00000422544 PSMD14O00487 310 aa11.42□□□□□ -0.58
PDGFC-202ENST00000422544 SMARCA5O60264 1052 aaPredicted RBP11.42□□□□□ -0.58
PDGFC-202ENST00000422544 IL1R1P14778 569 aa11.42□□□□□ -0.58
PDGFC-202ENST00000422544 FBXW7Q969H0 707 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms