RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 ATP2B4P23634 1241 aa12.49□□□□□ -0.41
NF1-203ENST00000422121 EPHX2P34913 555 aa12.49□□□□□ -0.41
NF1-203ENST00000422121 IGHMBP2P38935 993 aaKnown RBP12.49□□□□□ -0.41
NF1-203ENST00000422121 GMPSP49915 693 aaPredicted RBP12.49□□□□□ -0.41
NF1-203ENST00000422121 CHRNDQ07001 517 aa12.49□□□□□ -0.41
NF1-203ENST00000422121 FSTL1Q12841 308 aa12.49□□□□□ -0.41
NF1-203ENST00000422121 IFIT5Q13325 482 aaKnown RBP12.49□□□□□ -0.41
NF1-203ENST00000422121 INTS3Q68E01 1043 aaKnown RBP12.49□□□□□ -0.41
NF1-203ENST00000422121 CIAPIN1Q6FI81 312 aa12.49□□□□□ -0.41
NF1-203ENST00000422121 HELBQ8NG08 1087 aaPredicted RBP12.49□□□□□ -0.41
NF1-203ENST00000422121 PUS3Q9BZE2 481 aaKnown RBP12.49□□□□□ -0.41
NF1-203ENST00000422121 API5Q9BZZ5 524 aaKnown RBP12.49□□□□□ -0.41
NF1-203ENST00000422121 ZC3H12CQ9C0D7 883 aaKnown RBP12.49□□□□□ -0.41
NF1-203ENST00000422121 GPRC5DQ9NZD1 345 aa12.49□□□□□ -0.41
NF1-203ENST00000422121 ADAMTSL1Q8N6G6 1762 aa12.48□□□□□ -0.41
NF1-203ENST00000422121 IQCA1LA6NCM1 817 aa12.48□□□□□ -0.41
NF1-203ENST00000422121 PSMD14O00487 310 aa12.48□□□□□ -0.41
NF1-203ENST00000422121 RFX5P48382 616 aaPredicted RBP12.48□□□□□ -0.41
NF1-203ENST00000422121 HIRAP54198 1017 aaPredicted RBP12.48□□□□□ -0.41
NF1-203ENST00000422121 C16orf71Q8IYS4 520 aaPredicted RBP12.48□□□□□ -0.41
NF1-203ENST00000422121 SMC1BQ8NDV3 1235 aa12.48□□□□□ -0.41
NF1-203ENST00000422121 KLHDC4Q8TBB5 520 aa12.48□□□□□ -0.41
NF1-203ENST00000422121 EYA3Q99504 573 aa12.48□□□□□ -0.41
NF1-203ENST00000422121 MPHOSPH8Q99549 860 aa12.48□□□□□ -0.41
NF1-203ENST00000422121 LEMD3Q9Y2U8 911 aa12.48□□□□□ -0.41
NF1-203ENST00000422121 CHMP3Q9Y3E7 222 aa12.48□□□□□ -0.41
NF1-203ENST00000422121 RIPOR2Q9Y4F9 1068 aa12.48□□□□□ -0.41
NF1-203ENST00000422121 ZNF804BA4D1E1 1349 aa12.47□□□□□ -0.41
NF1-203ENST00000422121 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
NF1-203ENST00000422121 HTRA3P83110 453 aa12.47□□□□□ -0.41
NF1-203ENST00000422121 CCDC57Q2TAC2 916 aa12.47□□□□□ -0.41
NF1-203ENST00000422121 LRRC24Q50LG9 513 aa12.47□□□□□ -0.41
NF1-203ENST00000422121 ATF7IPQ6VMQ6 1270 aa12.47□□□□□ -0.41
NF1-203ENST00000422121 MEIS3Q99687 375 aa12.47□□□□□ -0.41
NF1-203ENST00000422121 MED23Q9ULK4 1368 aa12.46□□□□□ -0.41
NF1-203ENST00000422121 KIF16BQ96L93 1317 aa12.46□□□□□ -0.41
NF1-203ENST00000422121 EGFRP00533 1210 aa12.46□□□□□ -0.41
NF1-203ENST00000422121 VIL1P09327 827 aaKnown RBP12.46□□□□□ -0.41
NF1-203ENST00000422121 TNIP1Q15025 636 aa12.46□□□□□ -0.41
NF1-203ENST00000422121 LDHAL6AQ6ZMR3 332 aa12.46□□□□□ -0.41
NF1-203ENST00000422121 DNAJC5GQ8N7S2 189 aa12.46□□□□□ -0.41
NF1-203ENST00000422121 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
NF1-203ENST00000422121 GMLQ99445 158 aa12.46□□□□□ -0.41
NF1-203ENST00000422121 ANKRD2Q9GZV1 360 aa12.46□□□□□ -0.41
NF1-203ENST00000422121 PASKQ96RG2 1323 aa12.45□□□□□ -0.42
NF1-203ENST00000422121 PTPN12Q05209 780 aaKnown RBP12.45□□□□□ -0.42
NF1-203ENST00000422121 DCAF8Q5TAQ9 597 aa12.45□□□□□ -0.42
NF1-203ENST00000422121 LDHDQ86WU2 507 aa12.45□□□□□ -0.42
NF1-203ENST00000422121 TRPM4Q8TD43 1214 aa12.45□□□□□ -0.42
NF1-203ENST00000422121 FRAT1Q92837 279 aaPredicted RBP12.45□□□□□ -0.42
NF1-203ENST00000422121 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
NF1-203ENST00000422121 CNOT7Q9UIV1 285 aaKnown RBP12.45□□□□□ -0.42
NF1-203ENST00000422121 A0A1B0GUL6 1792 aa12.45□□□□□ -0.42
NF1-203ENST00000422121 IPO8O15397 1037 aaKnown RBP12.44□□□□□ -0.42
NF1-203ENST00000422121 RLBP1P12271 317 aa12.44□□□□□ -0.42
NF1-203ENST00000422121 FMR1Q06787 632 aaKnown RBP eCLIP12.44□□□□□ -0.42
NF1-203ENST00000422121 EAPPQ56P03 285 aaPredicted RBP12.44□□□□□ -0.42
NF1-203ENST00000422121 MAP1SQ66K74 1059 aaPredicted RBP12.44□□□□□ -0.42
NF1-203ENST00000422121 C15orf52Q6ZUT6 534 aaKnown RBP12.44□□□□□ -0.42
NF1-203ENST00000422121 PODNQ7Z5L7 613 aa12.44□□□□□ -0.42
NF1-203ENST00000422121 PNMA8AQ86V59 439 aaPredicted RBP12.44□□□□□ -0.42
NF1-203ENST00000422121 TMEM57Q8N5G2 664 aa12.44□□□□□ -0.42
NF1-203ENST00000422121 VGLL2Q8N8G2 317 aa12.44□□□□□ -0.42
NF1-203ENST00000422121 DPF2Q92785 391 aa12.44□□□□□ -0.42
NF1-203ENST00000422121 MXD3Q9BW11 206 aa12.44□□□□□ -0.42
NF1-203ENST00000422121 PGAP2Q9UHJ9 254 aa12.44□□□□□ -0.42
NF1-203ENST00000422121 LRRFIP2Q9Y608 721 aaKnown RBP12.44□□□□□ -0.42
NF1-203ENST00000422121 ZNF646O15015 1829 aaPredicted RBP12.44□□□□□ -0.42
NF1-203ENST00000422121 UBTFL1P0CB47 393 aaPredicted RBP12.43□□□□□ -0.42
NF1-203ENST00000422121 DACT2Q5SW24 774 aa12.43□□□□□ -0.42
NF1-203ENST00000422121 ZKSCAN2Q63HK3 967 aa12.43□□□□□ -0.42
NF1-203ENST00000422121 USP50Q70EL3 339 aaPredicted RBP12.43□□□□□ -0.42
NF1-203ENST00000422121 ATG9AQ7Z3C6 839 aa12.43□□□□□ -0.42
NF1-203ENST00000422121 SAMD7Q7Z3H4 446 aa12.43□□□□□ -0.42
NF1-203ENST00000422121 MICALL2Q8IY33 904 aa12.43□□□□□ -0.42
NF1-203ENST00000422121 CNNM1Q9NRU3 951 aa12.43□□□□□ -0.42
NF1-203ENST00000422121 ADARB2Q9NS39 739 aaKnown RBP12.43□□□□□ -0.42
NF1-203ENST00000422121 PLIN1O60240 522 aa12.42□□□□□ -0.42
NF1-203ENST00000422121 LMOD1P29536 600 aaPredicted RBP12.42□□□□□ -0.42
NF1-203ENST00000422121 APLP1P51693 650 aa12.42□□□□□ -0.42
NF1-203ENST00000422121 RSBN1LQ6PCB5 846 aaPredicted RBP12.42□□□□□ -0.42
NF1-203ENST00000422121 CNTROBQ8N137 903 aa12.42□□□□□ -0.42
NF1-203ENST00000422121 COA1Q9GZY4 146 aa12.42□□□□□ -0.42
NF1-203ENST00000422121 CD209Q9NNX6 404 aa12.42□□□□□ -0.42
NF1-203ENST00000422121 USP17L3A6NCW0 530 aa12.41□□□□□ -0.42
NF1-203ENST00000422121 USP17L4A6NCW7 530 aa12.41□□□□□ -0.42
NF1-203ENST00000422121 ZNF609O15014 1411 aa12.41□□□□□ -0.42
NF1-203ENST00000422121 ZNF280AP59817 542 aaPredicted RBP12.41□□□□□ -0.42
NF1-203ENST00000422121 TAF7LQ5H9L4 462 aa12.41□□□□□ -0.42
NF1-203ENST00000422121 DLK2Q6UY11 383 aa12.41□□□□□ -0.42
NF1-203ENST00000422121 USP17L1Q7RTZ2 530 aa12.41□□□□□ -0.42
NF1-203ENST00000422121 RASEFQ8IZ41 740 aa12.41□□□□□ -0.42
NF1-203ENST00000422121 FAM212AQ96EL1 285 aa12.41□□□□□ -0.42
NF1-203ENST00000422121 FAM84BQ96KN1 310 aaPredicted RBP12.41□□□□□ -0.42
NF1-203ENST00000422121 PSME4Q14997 1843 aa12.41□□□□□ -0.42
NF1-203ENST00000422121 EYA2O00167 538 aa12.4□□□□□ -0.42
NF1-203ENST00000422121 PDE8BO95263 885 aa12.4□□□□□ -0.42
NF1-203ENST00000422121 IL1R1P14778 569 aa12.4□□□□□ -0.42
NF1-203ENST00000422121 FGFR2P21802 821 aa12.4□□□□□ -0.42
NF1-203ENST00000422121 RPS12P25398 132 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms