RNA–Protein interactions for RNA: ENST00000421450.1

TNFAIP3-203, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-203ENST00000421450 FMR1Q06787 632 aaKnown RBP eCLIP22.1■■□□□ 1.13
TNFAIP3-203ENST00000421450 KAZALD1Q96I82 304 aa22.1■■□□□ 1.13
TNFAIP3-203ENST00000421450 GLIS2Q9BZE0 524 aaPredicted RBP22.1■■□□□ 1.13
TNFAIP3-203ENST00000421450 USP44Q9H0E7 712 aa22.1■■□□□ 1.13
TNFAIP3-203ENST00000421450 KIF16BQ96L93 1317 aa22.09■■□□□ 1.13
TNFAIP3-203ENST00000421450 SNAP23O00161 211 aa22.09■■□□□ 1.13
TNFAIP3-203ENST00000421450 KLRK1P26718 216 aa22.09■■□□□ 1.13
TNFAIP3-203ENST00000421450 KIF4BQ2VIQ3 1234 aa22.09■■□□□ 1.13
TNFAIP3-203ENST00000421450 CDC37L1Q7L3B6 337 aa22.08■■□□□ 1.13
TNFAIP3-203ENST00000421450 JMYQ8N9B5 988 aa22.08■■□□□ 1.13
TNFAIP3-203ENST00000421450 PGAP2Q9UHJ9 254 aa22.08■■□□□ 1.13
TNFAIP3-203ENST00000421450 USP17L8P0C7I0 530 aa22.07■■□□□ 1.12
TNFAIP3-203ENST00000421450 BRPF1P55201 1214 aaPredicted RBP22.07■■□□□ 1.12
TNFAIP3-203ENST00000421450 DCPSQ96C86 337 aaKnown RBP22.07■■□□□ 1.12
TNFAIP3-203ENST00000421450 ZNF408Q9H9D4 720 aa22.07■■□□□ 1.12
TNFAIP3-203ENST00000421450 PSME4Q14997 1843 aa22.07■■□□□ 1.12
TNFAIP3-203ENST00000421450 EGFRP00533 1210 aa22.06■■□□□ 1.12
TNFAIP3-203ENST00000421450 UBTFL1P0CB47 393 aaPredicted RBP22.06■■□□□ 1.12
TNFAIP3-203ENST00000421450 RABL6Q3YEC7 729 aaPredicted RBP22.06■■□□□ 1.12
TNFAIP3-203ENST00000421450 STRIP1Q5VSL9 837 aa22.06■■□□□ 1.12
TNFAIP3-203ENST00000421450 TTLL5Q6EMB2 1281 aa22.06■■□□□ 1.12
TNFAIP3-203ENST00000421450 ZNF804AQ7Z570 1209 aa22.06■■□□□ 1.12
TNFAIP3-203ENST00000421450 USP48Q86UV5 1035 aa22.06■■□□□ 1.12
TNFAIP3-203ENST00000421450 ANKRD44Q8N8A2 993 aa22.06■■□□□ 1.12
TNFAIP3-203ENST00000421450 PUS3Q9BZE2 481 aaKnown RBP22.06■■□□□ 1.12
TNFAIP3-203ENST00000421450 TRPM7Q96QT4 1865 aa22.05■■□□□ 1.12
TNFAIP3-203ENST00000421450 CNTNAP1P78357 1384 aa22.05■■□□□ 1.12
TNFAIP3-203ENST00000421450 IPO8O15397 1037 aaKnown RBP22.05■■□□□ 1.12
TNFAIP3-203ENST00000421450 CELF2O95319 508 aaKnown RBP22.05■■□□□ 1.12
TNFAIP3-203ENST00000421450 GTF2IP78347 998 aa22.05■■□□□ 1.12
TNFAIP3-203ENST00000421450 DEFB115Q30KQ5 88 aa22.05■■□□□ 1.12
TNFAIP3-203ENST00000421450 PAXIP1Q6ZW49 1069 aaPredicted RBP22.05■■□□□ 1.12
TNFAIP3-203ENST00000421450 OGFOD1Q8N543 542 aa22.05■■□□□ 1.12
TNFAIP3-203ENST00000421450 FRAT1Q92837 279 aaPredicted RBP22.05■■□□□ 1.12
TNFAIP3-203ENST00000421450 MXD3Q9BW11 206 aa22.05■■□□□ 1.12
TNFAIP3-203ENST00000421450 CD209Q9NNX6 404 aa22.05■■□□□ 1.12
TNFAIP3-203ENST00000421450 MYO3BQ8WXR4 1341 aa22.05■■□□□ 1.12
TNFAIP3-203ENST00000421450 DACT2Q5SW24 774 aa22.04■■□□□ 1.12
TNFAIP3-203ENST00000421450 MYOZ2Q9NPC6 264 aa22.04■■□□□ 1.12
TNFAIP3-203ENST00000421450 MROH5Q6ZUA9 1318 aa22.04■■□□□ 1.12
TNFAIP3-203ENST00000421450 A0A1B0GUL6 1792 aa22.03■■□□□ 1.12
TNFAIP3-203ENST00000421450 ZNF280AP59817 542 aaPredicted RBP22.03■■□□□ 1.12
TNFAIP3-203ENST00000421450 C15orf52Q6ZUT6 534 aaKnown RBP22.03■■□□□ 1.12
TNFAIP3-203ENST00000421450 KRT26Q7Z3Y9 468 aa22.03■■□□□ 1.12
TNFAIP3-203ENST00000421450 ARHGAP45Q92619 1136 aa22.03■■□□□ 1.12
TNFAIP3-203ENST00000421450 GMLQ99445 158 aa22.03■■□□□ 1.12
TNFAIP3-203ENST00000421450 HDAC5Q9UQL6 1122 aa22.03■■□□□ 1.12
TNFAIP3-203ENST00000421450 POLR2AP24928 1970 aaKnown RBP22.02■■□□□ 1.12
TNFAIP3-203ENST00000421450 BCAR3O75815 825 aa22.02■■□□□ 1.12
TNFAIP3-203ENST00000421450 SCARF1Q14162 830 aa22.02■■□□□ 1.12
TNFAIP3-203ENST00000421450 METTL24Q5JXM2 366 aa22.02■■□□□ 1.12
TNFAIP3-203ENST00000421450 CST9Q5W186 159 aa22.02■■□□□ 1.12
TNFAIP3-203ENST00000421450 KLHDC4Q8TBB5 520 aa22.02■■□□□ 1.12
TNFAIP3-203ENST00000421450 GGA3Q9NZ52 723 aa22.02■■□□□ 1.12
TNFAIP3-203ENST00000421450 ZNF609O15014 1411 aa22.02■■□□□ 1.12
TNFAIP3-203ENST00000421450 VEGFBP49765 207 aa22.01■■□□□ 1.11
TNFAIP3-203ENST00000421450 GRM1Q13255 1194 aa22.01■■□□□ 1.11
TNFAIP3-203ENST00000421450 UBE4AQ14139 1066 aa22.01■■□□□ 1.11
TNFAIP3-203ENST00000421450 LRRC24Q50LG9 513 aa22.01■■□□□ 1.11
TNFAIP3-203ENST00000421450 SULF1Q8IWU6 871 aa22.01■■□□□ 1.11
TNFAIP3-203ENST00000421450 HDAC9Q9UKV0 1011 aa22.01■■□□□ 1.11
TNFAIP3-203ENST00000421450 RIPOR2Q9Y4F9 1068 aa22.01■■□□□ 1.11
TNFAIP3-203ENST00000421450 RASSF10A6NK89 507 aa22■■□□□ 1.11
TNFAIP3-203ENST00000421450 KIAA0825Q8IV33 1275 aa22■■□□□ 1.11
TNFAIP3-203ENST00000421450 ADM5C9JUS6 153 aa21.99■■□□□ 1.11
TNFAIP3-203ENST00000421450 ANGEL2Q5VTE6 544 aaKnown RBP21.99■■□□□ 1.11
TNFAIP3-203ENST00000421450 LRRFIP2Q9Y608 721 aaKnown RBP21.99■■□□□ 1.11
TNFAIP3-203ENST00000421450 ASTN2O75129 1339 aaPredicted RBP21.99■■□□□ 1.11
TNFAIP3-203ENST00000421450 IRS2Q9Y4H2 1338 aa21.99■■□□□ 1.11
TNFAIP3-203ENST00000421450 HSPA1AP0DMV8 641 aaKnown RBP21.98■■□□□ 1.11
TNFAIP3-203ENST00000421450 HSPA1BP0DMV9 641 aaKnown RBP21.98■■□□□ 1.11
TNFAIP3-203ENST00000421450 GYG1P46976 350 aa21.98■■□□□ 1.11
TNFAIP3-203ENST00000421450 DLK2Q6UY11 383 aa21.98■■□□□ 1.11
TNFAIP3-203ENST00000421450 VPS37DQ86XT2 251 aa21.98■■□□□ 1.11
TNFAIP3-203ENST00000421450 JAG2Q9Y219 1238 aa21.98■■□□□ 1.11
TNFAIP3-203ENST00000421450 TLL2Q9Y6L7 1015 aa21.98■■□□□ 1.11
TNFAIP3-203ENST00000421450 ZBED9Q6R2W3 1325 aa21.98■■□□□ 1.11
TNFAIP3-203ENST00000421450 IL1R1P14778 569 aa21.97■■□□□ 1.11
TNFAIP3-203ENST00000421450 HIBADHP31937 336 aaKnown RBP21.97■■□□□ 1.11
TNFAIP3-203ENST00000421450 INTS3Q68E01 1043 aaKnown RBP21.97■■□□□ 1.11
TNFAIP3-203ENST00000421450 ATF7IPQ6VMQ6 1270 aa21.97■■□□□ 1.11
TNFAIP3-203ENST00000421450 CLUAP1Q96AJ1 413 aa21.97■■□□□ 1.11
TNFAIP3-203ENST00000421450 MEIS3Q99687 375 aa21.97■■□□□ 1.11
TNFAIP3-203ENST00000421450 TRIM27P14373 513 aa21.96■■□□□ 1.11
TNFAIP3-203ENST00000421450 ECE1P42892 770 aa21.96■■□□□ 1.11
TNFAIP3-203ENST00000421450 MMP14P50281 582 aa21.96■■□□□ 1.11
TNFAIP3-203ENST00000421450 WDR33Q9C0J8 1336 aaKnown RBP21.96■■□□□ 1.11
TNFAIP3-203ENST00000421450 F8W031 263 aaPredicted RBP21.95■■□□□ 1.1
TNFAIP3-203ENST00000421450 EYA2O00167 538 aa21.95■■□□□ 1.1
TNFAIP3-203ENST00000421450 FRAT2O75474 233 aaPredicted RBP21.95■■□□□ 1.1
TNFAIP3-203ENST00000421450 PDE8BO95263 885 aa21.95■■□□□ 1.1
TNFAIP3-203ENST00000421450 GNAI3P08754 354 aa21.95■■□□□ 1.1
TNFAIP3-203ENST00000421450 NBPF9Q3BBW0 867 aa21.95■■□□□ 1.1
TNFAIP3-203ENST00000421450 CAVIN4Q5BKX8 364 aa21.95■■□□□ 1.1
TNFAIP3-203ENST00000421450 ZKSCAN2Q63HK3 967 aa21.95■■□□□ 1.1
TNFAIP3-203ENST00000421450 CYP4F22Q6NT55 531 aa21.95■■□□□ 1.1
TNFAIP3-203ENST00000421450 FAM84BQ96KN1 310 aaPredicted RBP21.95■■□□□ 1.1
TNFAIP3-203ENST00000421450 CAPNS2Q96L46 248 aa21.95■■□□□ 1.1
TNFAIP3-203ENST00000421450 SIL1Q9H173 461 aa21.95■■□□□ 1.1
TNFAIP3-203ENST00000421450 SASH1O94885 1247 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms