RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 RAPGEF4Q8WZA2 1011 aa18.6■□□□□ 0.57
TRIM13-204ENST00000420995 SLIT3O75094 1523 aa18.6■□□□□ 0.57
TRIM13-204ENST00000420995 CCDC69A6NI79 296 aa18.6■□□□□ 0.57
TRIM13-204ENST00000420995 IGSF3O75054 1194 aa18.6■□□□□ 0.57
TRIM13-204ENST00000420995 HMGB1P09429 215 aaKnown RBP18.6■□□□□ 0.57
TRIM13-204ENST00000420995 FAM160A1Q05DH4 1040 aa18.6■□□□□ 0.57
TRIM13-204ENST00000420995 EXOSC10Q01780 885 aaKnown RBP18.59■□□□□ 0.57
TRIM13-204ENST00000420995 AOPEPQ8N6M6 819 aa18.59■□□□□ 0.57
TRIM13-204ENST00000420995 DDX17Q92841 729 aaKnown RBP18.59■□□□□ 0.57
TRIM13-204ENST00000420995 NLRP2Q9NX02 1062 aa18.59■□□□□ 0.57
TRIM13-204ENST00000420995 TRMT1Q9NXH9 659 aaKnown RBP18.59■□□□□ 0.57
TRIM13-204ENST00000420995 SALL1Q9NSC2 1324 aa18.59■□□□□ 0.57
TRIM13-204ENST00000420995 RBM6P78332 1123 aaKnown RBP18.59■□□□□ 0.57
TRIM13-204ENST00000420995 PAG1Q9NWQ8 432 aa18.59■□□□□ 0.57
TRIM13-204ENST00000420995 E7EWF7 191 aa18.58■□□□□ 0.57
TRIM13-204ENST00000420995 PHKG2P15735 406 aa18.58■□□□□ 0.57
TRIM13-204ENST00000420995 TIMM10P62072 90 aa18.58■□□□□ 0.57
TRIM13-204ENST00000420995 CTNNA3Q9UI47 895 aa18.58■□□□□ 0.57
TRIM13-204ENST00000420995 ADAMTS7Q9UKP4 1686 aa18.58■□□□□ 0.57
TRIM13-204ENST00000420995 CCZ1BP86790 482 aa18.58■□□□□ 0.56
TRIM13-204ENST00000420995 CCZ1P86791 482 aaPredicted RBP18.58■□□□□ 0.56
TRIM13-204ENST00000420995 SYCP1Q15431 976 aa18.58■□□□□ 0.56
TRIM13-204ENST00000420995 RGPD5Q99666 1765 aa18.58■□□□□ 0.56
TRIM13-204ENST00000420995 GTPBP4Q9BZE4 634 aaKnown RBP18.58■□□□□ 0.56
TRIM13-204ENST00000420995 ANO10Q9NW15 660 aa18.58■□□□□ 0.56
TRIM13-204ENST00000420995 HSPD1P10809 573 aaKnown RBP18.57■□□□□ 0.56
TRIM13-204ENST00000420995 PDIA3P30101 505 aaKnown RBP18.57■□□□□ 0.56
TRIM13-204ENST00000420995 OTUD7BQ6GQQ9 843 aa18.57■□□□□ 0.56
TRIM13-204ENST00000420995 ZNF396Q96N95 335 aaPredicted RBP18.57■□□□□ 0.56
TRIM13-204ENST00000420995 AGXT2Q9BYV1 514 aa18.57■□□□□ 0.56
TRIM13-204ENST00000420995 GPHNQ9NQX3 736 aaPredicted RBP18.57■□□□□ 0.56
TRIM13-204ENST00000420995 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.57■□□□□ 0.56
TRIM13-204ENST00000420995 V9GYY5 206 aaPredicted RBP18.57■□□□□ 0.56
TRIM13-204ENST00000420995 SNRPA1P09661 255 aaKnown RBP18.57■□□□□ 0.56
TRIM13-204ENST00000420995 CASP7P55210 303 aa18.57■□□□□ 0.56
TRIM13-204ENST00000420995 TTLL5Q6EMB2 1281 aa18.57■□□□□ 0.56
TRIM13-204ENST00000420995 NYAP1Q6ZVC0 841 aa18.57■□□□□ 0.56
TRIM13-204ENST00000420995 CEP57L1Q8IYX8 460 aa18.57■□□□□ 0.56
TRIM13-204ENST00000420995 TTC5Q8N0Z6 440 aa18.57■□□□□ 0.56
TRIM13-204ENST00000420995 FEZ1Q99689 392 aa18.57■□□□□ 0.56
TRIM13-204ENST00000420995 CAMTA1Q9Y6Y1 1673 aa18.57■□□□□ 0.56
TRIM13-204ENST00000420995 CARMIL3Q8ND23 1372 aa18.57■□□□□ 0.56
TRIM13-204ENST00000420995 PALLDQ8WX93 1383 aa18.57■□□□□ 0.56
TRIM13-204ENST00000420995 A0A1B0GVL5 298 aa18.56■□□□□ 0.56
TRIM13-204ENST00000420995 PTPN14Q15678 1187 aa18.56■□□□□ 0.56
TRIM13-204ENST00000420995 KRT28Q7Z3Y7 464 aa18.56■□□□□ 0.56
TRIM13-204ENST00000420995 DSCC1Q9BVC3 393 aa18.56■□□□□ 0.56
TRIM13-204ENST00000420995 PCDHA7Q9UN72 937 aa18.56■□□□□ 0.56
TRIM13-204ENST00000420995 ATG9AQ7Z3C6 839 aa18.56■□□□□ 0.56
TRIM13-204ENST00000420995 PROSER2Q86WR7 435 aaPredicted RBP18.56■□□□□ 0.56
TRIM13-204ENST00000420995 ZNF215Q9UL58 517 aaPredicted RBP18.56■□□□□ 0.56
TRIM13-204ENST00000420995 MAST3O60307 1309 aa18.56■□□□□ 0.56
TRIM13-204ENST00000420995 NEMFO60524 1076 aa18.55■□□□□ 0.56
TRIM13-204ENST00000420995 HELLSQ9NRZ9 838 aa18.55■□□□□ 0.56
TRIM13-204ENST00000420995 FDPSP14324 419 aaKnown RBP18.55■□□□□ 0.56
TRIM13-204ENST00000420995 ZMYM1Q5SVZ6 1142 aa18.55■□□□□ 0.56
TRIM13-204ENST00000420995 FMR1NBQ8N0W7 255 aaPredicted RBP18.55■□□□□ 0.56
TRIM13-204ENST00000420995 MRPS27Q92552 414 aaKnown RBP18.55■□□□□ 0.56
TRIM13-204ENST00000420995 SDF4Q9BRK5 362 aa18.55■□□□□ 0.56
TRIM13-204ENST00000420995 OGFRQ9NZT2 677 aa18.55■□□□□ 0.56
TRIM13-204ENST00000420995 CGNQ9P2M7 1197 aaKnown RBP18.55■□□□□ 0.56
TRIM13-204ENST00000420995 LAMA4Q16363 1823 aa18.54■□□□□ 0.56
TRIM13-204ENST00000420995 NDUFA8P51970 172 aa18.54■□□□□ 0.56
TRIM13-204ENST00000420995 NBPF11Q86T75 865 aa18.54■□□□□ 0.56
TRIM13-204ENST00000420995 MEGF6O75095 1541 aa18.54■□□□□ 0.56
TRIM13-204ENST00000420995 FOXO4P98177 505 aa18.54■□□□□ 0.56
TRIM13-204ENST00000420995 DPCR1Q3MIW9 517 aa18.54■□□□□ 0.56
TRIM13-204ENST00000420995 TRPM3Q9HCF6 1732 aaPredicted RBP18.54■□□□□ 0.56
TRIM13-204ENST00000420995 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
TRIM13-204ENST00000420995 TATP17735 454 aaPredicted RBP18.53■□□□□ 0.56
TRIM13-204ENST00000420995 CCAR2Q8N163 923 aaKnown RBP18.53■□□□□ 0.56
TRIM13-204ENST00000420995 POLR3DP05423 398 aaPredicted RBP18.53■□□□□ 0.56
TRIM13-204ENST00000420995 ATL3Q6DD88 541 aa18.53■□□□□ 0.56
TRIM13-204ENST00000420995 MYH15Q9Y2K3 1946 aa18.53■□□□□ 0.56
TRIM13-204ENST00000420995 M0R2C6 588 aa18.53■□□□□ 0.56
TRIM13-204ENST00000420995 LRRC24Q50LG9 513 aa18.53■□□□□ 0.56
TRIM13-204ENST00000420995 RAB11FIP4Q86YS3 637 aa18.53■□□□□ 0.56
TRIM13-204ENST00000420995 ZNF274Q96GC6 653 aaPredicted RBP18.53■□□□□ 0.56
TRIM13-204ENST00000420995 ZNF594Q96JF6 807 aaPredicted RBP18.53■□□□□ 0.56
TRIM13-204ENST00000420995 FMNL2Q96PY5 1086 aa18.53■□□□□ 0.56
TRIM13-204ENST00000420995 GJB4Q9NTQ9 266 aa18.53■□□□□ 0.56
TRIM13-204ENST00000420995 CLIC4Q9Y696 253 aa18.53■□□□□ 0.56
TRIM13-204ENST00000420995 AFDNP55196 1824 aaKnown RBP18.52■□□□□ 0.56
TRIM13-204ENST00000420995 HAND2P61296 217 aa18.52■□□□□ 0.56
TRIM13-204ENST00000420995 IFNL2Q8IZJ0 200 aa18.52■□□□□ 0.56
TRIM13-204ENST00000420995 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.55
TRIM13-204ENST00000420995 CYP27B1O15528 508 aa18.52■□□□□ 0.55
TRIM13-204ENST00000420995 PLBD2Q8NHP8 589 aa18.52■□□□□ 0.55
TRIM13-204ENST00000420995 NAT10Q9H0A0 1025 aaKnown RBP18.52■□□□□ 0.55
TRIM13-204ENST00000420995 RTEL1Q9NZ71 1219 aa18.52■□□□□ 0.55
TRIM13-204ENST00000420995 DDX41Q9UJV9 622 aaKnown RBP18.52■□□□□ 0.55
TRIM13-204ENST00000420995 BIN1O00499 593 aa18.51■□□□□ 0.55
TRIM13-204ENST00000420995 IFIT1P09914 478 aaKnown RBP18.51■□□□□ 0.55
TRIM13-204ENST00000420995 ADALQ6DHV7 355 aa18.51■□□□□ 0.55
TRIM13-204ENST00000420995 LINC00301Q8NCQ3 95 aa18.51■□□□□ 0.55
TRIM13-204ENST00000420995 NEDD4P46934 1319 aa18.51■□□□□ 0.55
TRIM13-204ENST00000420995 SF3A1Q15459 793 aaKnown RBP18.51■□□□□ 0.55
TRIM13-204ENST00000420995 KMT5BQ4FZB7 885 aa18.51■□□□□ 0.55
TRIM13-204ENST00000420995 KIF18AQ8NI77 898 aa18.51■□□□□ 0.55
TRIM13-204ENST00000420995 OSBP2Q969R2 916 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms