RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 MINPP1Q9UNW1 487 aa16.64■□□□□ 0.25
LINC00339-203ENST00000420503 FZD1Q9UP38 647 aa16.64■□□□□ 0.25
LINC00339-203ENST00000420503 PI4KAP2A4QPH2 592 aa16.63■□□□□ 0.25
LINC00339-203ENST00000420503 USP17L3A6NCW0 530 aa16.63■□□□□ 0.25
LINC00339-203ENST00000420503 USP17L4A6NCW7 530 aa16.63■□□□□ 0.25
LINC00339-203ENST00000420503 SASH1O94885 1247 aa16.63■□□□□ 0.25
LINC00339-203ENST00000420503 ATP2B4P23634 1241 aa16.63■□□□□ 0.25
LINC00339-203ENST00000420503 DACT2Q5SW24 774 aa16.63■□□□□ 0.25
LINC00339-203ENST00000420503 USP17L1Q7RTZ2 530 aa16.63■□□□□ 0.25
LINC00339-203ENST00000420503 PI4KAP1Q8N8J0 262 aa16.63■□□□□ 0.25
LINC00339-203ENST00000420503 FBXW7Q969H0 707 aa16.63■□□□□ 0.25
LINC00339-203ENST00000420503 TBC1D8O95759 1140 aa16.62■□□□□ 0.25
LINC00339-203ENST00000420503 SNAP23O00161 211 aa16.61■□□□□ 0.25
LINC00339-203ENST00000420503 R3HDMLQ9H3Y0 253 aa16.61■□□□□ 0.25
LINC00339-203ENST00000420503 MED23Q9ULK4 1368 aa16.61■□□□□ 0.25
LINC00339-203ENST00000420503 WNT10BO00744 389 aa16.6■□□□□ 0.25
LINC00339-203ENST00000420503 CCT4P50991 539 aaKnown RBP16.6■□□□□ 0.25
LINC00339-203ENST00000420503 PRKG1Q13976 671 aa16.6■□□□□ 0.25
LINC00339-203ENST00000420503 CCDC30Q5VVM6 783 aa16.6■□□□□ 0.25
LINC00339-203ENST00000420503 KSR2Q6VAB6 950 aa16.6■□□□□ 0.25
LINC00339-203ENST00000420503 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
LINC00339-203ENST00000420503 PCDHAC2Q9Y5I4 1007 aa16.6■□□□□ 0.25
LINC00339-203ENST00000420503 NEURL1BA8MQ27 555 aa16.59■□□□□ 0.25
LINC00339-203ENST00000420503 PODNQ7Z5L7 613 aa16.59■□□□□ 0.25
LINC00339-203ENST00000420503 CTU1Q7Z7A3 348 aaKnown RBP16.59■□□□□ 0.25
LINC00339-203ENST00000420503 CDC5LQ99459 802 aaKnown RBP16.59■□□□□ 0.25
LINC00339-203ENST00000420503 BSDC1Q9NW68 430 aaPredicted RBP16.59■□□□□ 0.25
LINC00339-203ENST00000420503 PITPNM2Q9BZ72 1349 aa16.59■□□□□ 0.25
LINC00339-203ENST00000420503 DDX58O95786 925 aaKnown RBP16.58■□□□□ 0.24
LINC00339-203ENST00000420503 TTLL12Q14166 644 aaPredicted RBP16.58■□□□□ 0.24
LINC00339-203ENST00000420503 ZNF296Q8WUU4 475 aaPredicted RBP16.58■□□□□ 0.24
LINC00339-203ENST00000420503 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.58■□□□□ 0.24
LINC00339-203ENST00000420503 HPS5Q9UPZ3 1129 aa16.58■□□□□ 0.24
LINC00339-203ENST00000420503 AOX1Q06278 1338 aa16.58■□□□□ 0.24
LINC00339-203ENST00000420503 H7C1W4 665 aa16.57■□□□□ 0.24
LINC00339-203ENST00000420503 CASP7P55210 303 aa16.57■□□□□ 0.24
LINC00339-203ENST00000420503 PTPN12Q05209 780 aaKnown RBP16.57■□□□□ 0.24
LINC00339-203ENST00000420503 KIAA0825Q8IV33 1275 aa16.57■□□□□ 0.24
LINC00339-203ENST00000420503 HSP90B1P14625 803 aaKnown RBP16.56■□□□□ 0.24
LINC00339-203ENST00000420503 FKBP1BP68106 108 aa16.56■□□□□ 0.24
LINC00339-203ENST00000420503 A0A1B0GUL6 1792 aa16.56■□□□□ 0.24
LINC00339-203ENST00000420503 SSC5DA1L4H1 1573 aa16.55■□□□□ 0.24
LINC00339-203ENST00000420503 ITGA6P23229 1130 aa16.55■□□□□ 0.24
LINC00339-203ENST00000420503 GTF2IP78347 998 aa16.55■□□□□ 0.24
LINC00339-203ENST00000420503 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
LINC00339-203ENST00000420503 STRIP1Q5VSL9 837 aa16.55■□□□□ 0.24
LINC00339-203ENST00000420503 CERS5Q8N5B7 392 aa16.55■□□□□ 0.24
LINC00339-203ENST00000420503 JAG2Q9Y219 1238 aa16.55■□□□□ 0.24
LINC00339-203ENST00000420503 ZNF804BA4D1E1 1349 aa16.54■□□□□ 0.24
LINC00339-203ENST00000420503 IRS2Q9Y4H2 1338 aa16.54■□□□□ 0.24
LINC00339-203ENST00000420503 HELBQ8NG08 1087 aaPredicted RBP16.54■□□□□ 0.24
LINC00339-203ENST00000420503 ZBED3Q96IU2 234 aaPredicted RBP16.54■□□□□ 0.24
LINC00339-203ENST00000420503 COA1Q9GZY4 146 aa16.54■□□□□ 0.24
LINC00339-203ENST00000420503 TAF5LO75529 589 aa16.53■□□□□ 0.24
LINC00339-203ENST00000420503 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
LINC00339-203ENST00000420503 GCKRQ14397 625 aa16.53■□□□□ 0.24
LINC00339-203ENST00000420503 TWISTNBQ3B726 338 aaPredicted RBP16.53■□□□□ 0.24
LINC00339-203ENST00000420503 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
LINC00339-203ENST00000420503 GPR25O00155 361 aa16.52■□□□□ 0.24
LINC00339-203ENST00000420503 IGHMBP2P38935 993 aaKnown RBP16.52■□□□□ 0.24
LINC00339-203ENST00000420503 CHRNDQ07001 517 aa16.52■□□□□ 0.24
LINC00339-203ENST00000420503 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.24
LINC00339-203ENST00000420503 FLIIQ13045 1269 aa16.52■□□□□ 0.24
LINC00339-203ENST00000420503 OGFOD1Q8N543 542 aa16.52■□□□□ 0.24
LINC00339-203ENST00000420503 CLMNQ96JQ2 1002 aa16.52■□□□□ 0.24
LINC00339-203ENST00000420503 STK31Q9BXU1 1019 aa16.52■□□□□ 0.24
LINC00339-203ENST00000420503 HDAC9Q9UKV0 1011 aa16.52■□□□□ 0.24
LINC00339-203ENST00000420503 HTTP42858 3142 aa16.52■□□□□ 0.23
LINC00339-203ENST00000420503 F8W031 263 aaPredicted RBP16.51■□□□□ 0.23
LINC00339-203ENST00000420503 TM4SF4P48230 202 aa16.51■□□□□ 0.23
LINC00339-203ENST00000420503 WWC1Q8IX03 1113 aa16.51■□□□□ 0.23
LINC00339-203ENST00000420503 PLA2G12BQ9BX93 195 aa16.51■□□□□ 0.23
LINC00339-203ENST00000420503 ANGEL1Q9UNK9 670 aaKnown RBP16.51■□□□□ 0.23
LINC00339-203ENST00000420503 LEMD3Q9Y2U8 911 aa16.51■□□□□ 0.23
LINC00339-203ENST00000420503 CLRN2A0PK11 232 aa16.5■□□□□ 0.23
LINC00339-203ENST00000420503 F6X3S4 739 aa16.5■□□□□ 0.23
LINC00339-203ENST00000420503 CSF1RP07333 972 aa16.5■□□□□ 0.23
LINC00339-203ENST00000420503 EPHA10Q5JZY3 1008 aa16.5■□□□□ 0.23
LINC00339-203ENST00000420503 LDLRAD1Q5T700 205 aa16.5■□□□□ 0.23
LINC00339-203ENST00000420503 CD209Q9NNX6 404 aa16.5■□□□□ 0.23
LINC00339-203ENST00000420503 MYO3BQ8WXR4 1341 aa16.49■□□□□ 0.23
LINC00339-203ENST00000420503 FANCIQ9NVI1 1328 aa16.49■□□□□ 0.23
LINC00339-203ENST00000420503 SPRYD7Q5W111 196 aa16.49■□□□□ 0.23
LINC00339-203ENST00000420503 REM2Q8IYK8 340 aaPredicted RBP16.49■□□□□ 0.23
LINC00339-203ENST00000420503 DNAAF4Q8WXU2 420 aa16.49■□□□□ 0.23
LINC00339-203ENST00000420503 ZNF594Q96JF6 807 aaPredicted RBP16.49■□□□□ 0.23
LINC00339-203ENST00000420503 MPHOSPH8Q99549 860 aa16.49■□□□□ 0.23
LINC00339-203ENST00000420503 SALL2Q9Y467 1007 aaPredicted RBP16.49■□□□□ 0.23
LINC00339-203ENST00000420503 KCNJ4P48050 445 aa16.48■□□□□ 0.23
LINC00339-203ENST00000420503 FOXO4P98177 505 aa16.48■□□□□ 0.23
LINC00339-203ENST00000420503 CAP1Q01518 475 aa16.48■□□□□ 0.23
LINC00339-203ENST00000420503 FKBP5Q13451 457 aaPredicted RBP16.48■□□□□ 0.23
LINC00339-203ENST00000420503 DEFB129Q9H1M3 183 aa16.48■□□□□ 0.23
LINC00339-203ENST00000420503 ECM29Q5VYK3 1845 aa16.47■□□□□ 0.23
LINC00339-203ENST00000420503 MKI67P46013 3256 aaKnown RBP16.47■□□□□ 0.23
LINC00339-203ENST00000420503 IGF2BP3O00425 579 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC00339-203ENST00000420503 NF2P35240 595 aa16.47■□□□□ 0.23
LINC00339-203ENST00000420503 GJA5P36382 358 aa16.47■□□□□ 0.23
LINC00339-203ENST00000420503 ARMC9Q7Z3E5 817 aa16.47■□□□□ 0.23
LINC00339-203ENST00000420503 APOBEC3FQ8IUX4 373 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms