RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 EPB41L2O43491 1005 aaKnown RBP17.36■□□□□ 0.37
SHMT1P1-201ENST00000419974 DPEP1P16444 411 aa17.36■□□□□ 0.37
SHMT1P1-201ENST00000419974 GRIPAP1Q4V328 841 aa17.36■□□□□ 0.37
SHMT1P1-201ENST00000419974 CNKSR1Q969H4 720 aa17.36■□□□□ 0.37
SHMT1P1-201ENST00000419974 LRRC37AA6NMS7 1700 aa17.35■□□□□ 0.37
SHMT1P1-201ENST00000419974 PDS5AQ29RF7 1337 aaKnown RBP17.35■□□□□ 0.37
SHMT1P1-201ENST00000419974 SPEF2Q9C093 1822 aa17.35■□□□□ 0.37
SHMT1P1-201ENST00000419974 TSHZ3Q63HK5 1081 aa17.35■□□□□ 0.37
SHMT1P1-201ENST00000419974 CCDC102BQ68D86 513 aa17.35■□□□□ 0.37
SHMT1P1-201ENST00000419974 A0A1B0GUL6 1792 aa17.34■□□□□ 0.37
SHMT1P1-201ENST00000419974 HIP1O00291 1037 aa17.34■□□□□ 0.37
SHMT1P1-201ENST00000419974 SEMA3EO15041 775 aa17.34■□□□□ 0.37
SHMT1P1-201ENST00000419974 TAF5LO75529 589 aa17.34■□□□□ 0.37
SHMT1P1-201ENST00000419974 ATP2B4P23634 1241 aa17.34■□□□□ 0.37
SHMT1P1-201ENST00000419974 CC2D2BQ6DHV5 1058 aa17.34■□□□□ 0.37
SHMT1P1-201ENST00000419974 CASC1Q6TDU7 716 aa17.34■□□□□ 0.37
SHMT1P1-201ENST00000419974 TBC1D9Q6ZT07 1266 aa17.34■□□□□ 0.37
SHMT1P1-201ENST00000419974 FBXO33Q7Z6M2 555 aa17.34■□□□□ 0.37
SHMT1P1-201ENST00000419974 C2CD5Q86YS7 1000 aa17.34■□□□□ 0.37
SHMT1P1-201ENST00000419974 PIM2Q9P1W9 311 aa17.34■□□□□ 0.37
SHMT1P1-201ENST00000419974 PPEF1O14829 653 aaPredicted RBP17.33■□□□□ 0.36
SHMT1P1-201ENST00000419974 ADORA1P30542 326 aa17.33■□□□□ 0.36
SHMT1P1-201ENST00000419974 GORABQ5T7V8 394 aa17.33■□□□□ 0.36
SHMT1P1-201ENST00000419974 HELBQ8NG08 1087 aaPredicted RBP17.33■□□□□ 0.36
SHMT1P1-201ENST00000419974 BRCA1P38398 1863 aaKnown RBP17.33■□□□□ 0.36
SHMT1P1-201ENST00000419974 CAVIN4Q5BKX8 364 aa17.32■□□□□ 0.36
SHMT1P1-201ENST00000419974 TTC39AQ5SRH9 613 aa17.32■□□□□ 0.36
SHMT1P1-201ENST00000419974 TMED8Q6PL24 325 aaPredicted RBP17.32■□□□□ 0.36
SHMT1P1-201ENST00000419974 C7orf43Q8WVR3 580 aa17.32■□□□□ 0.36
SHMT1P1-201ENST00000419974 BOLA2Q9H3K6 86 aa17.32■□□□□ 0.36
SHMT1P1-201ENST00000419974 SNRKQ9NRH2 765 aa17.32■□□□□ 0.36
SHMT1P1-201ENST00000419974 BCS1LQ9Y276 419 aa17.32■□□□□ 0.36
SHMT1P1-201ENST00000419974 COL11A2P13942 1736 aaPredicted RBP17.32■□□□□ 0.36
SHMT1P1-201ENST00000419974 LTBP1Q14766 1721 aa17.31■□□□□ 0.36
SHMT1P1-201ENST00000419974 TRIM6-TRIM34B2RNG4 842 aa17.31■□□□□ 0.36
SHMT1P1-201ENST00000419974 CHMLP26374 656 aa17.31■□□□□ 0.36
SHMT1P1-201ENST00000419974 KBTBD3Q8NAB2 608 aa17.31■□□□□ 0.36
SHMT1P1-201ENST00000419974 TSHZ2Q9NRE2 1034 aa17.31■□□□□ 0.36
SHMT1P1-201ENST00000419974 GNL3LQ9NVN8 582 aaKnown RBP17.31■□□□□ 0.36
SHMT1P1-201ENST00000419974 TTF1Q15361 905 aaPredicted RBP17.3■□□□□ 0.36
SHMT1P1-201ENST00000419974 LRRFIP1Q32MZ4 808 aaKnown RBP17.3■□□□□ 0.36
SHMT1P1-201ENST00000419974 DALRD3Q5D0E6 543 aaKnown RBP17.3■□□□□ 0.36
SHMT1P1-201ENST00000419974 FAM84BQ96KN1 310 aaPredicted RBP17.3■□□□□ 0.36
SHMT1P1-201ENST00000419974 PAG1Q9NWQ8 432 aa17.3■□□□□ 0.36
SHMT1P1-201ENST00000419974 WWC3Q9ULE0 1092 aa17.3■□□□□ 0.36
SHMT1P1-201ENST00000419974 SNED1Q8TER0 1413 aa17.3■□□□□ 0.36
SHMT1P1-201ENST00000419974 TAF1P21675 1872 aa17.29■□□□□ 0.36
SHMT1P1-201ENST00000419974 DLEC1Q9Y238 1755 aa17.29■□□□□ 0.36
SHMT1P1-201ENST00000419974 MED23Q9ULK4 1368 aa17.29■□□□□ 0.36
SHMT1P1-201ENST00000419974 MCAMP43121 646 aa17.29■□□□□ 0.36
SHMT1P1-201ENST00000419974 PHKA1P46020 1223 aa17.29■□□□□ 0.36
SHMT1P1-201ENST00000419974 GPSM2P81274 684 aa17.29■□□□□ 0.36
SHMT1P1-201ENST00000419974 RILPL2Q969X0 211 aa17.29■□□□□ 0.36
SHMT1P1-201ENST00000419974 RTFDC1Q9BY42 306 aaPredicted RBP17.29■□□□□ 0.36
SHMT1P1-201ENST00000419974 ANKIB1Q9P2G1 1089 aa17.29■□□□□ 0.36
SHMT1P1-201ENST00000419974 GGA1Q9UJY5 639 aa17.29■□□□□ 0.36
SHMT1P1-201ENST00000419974 ARFGEF1Q9Y6D6 1849 aa17.28■□□□□ 0.36
SHMT1P1-201ENST00000419974 ZFYP08048 801 aaPredicted RBP17.28■□□□□ 0.36
SHMT1P1-201ENST00000419974 KCNJ4P48050 445 aa17.28■□□□□ 0.36
SHMT1P1-201ENST00000419974 PRPF40BQ6NWY9 871 aaKnown RBP17.28■□□□□ 0.36
SHMT1P1-201ENST00000419974 TBC1D16Q8TBP0 767 aa17.28■□□□□ 0.36
SHMT1P1-201ENST00000419974 RUFY2Q8WXA3 655 aa17.28■□□□□ 0.36
SHMT1P1-201ENST00000419974 BCL11AQ9H165 835 aa17.28■□□□□ 0.36
SHMT1P1-201ENST00000419974 TMX4Q9H1E5 349 aaPredicted RBP17.28■□□□□ 0.36
SHMT1P1-201ENST00000419974 RAD50Q92878 1312 aa17.28■□□□□ 0.36
SHMT1P1-201ENST00000419974 SNAP23O00161 211 aa17.27■□□□□ 0.36
SHMT1P1-201ENST00000419974 CHRNA5P30532 468 aa17.27■□□□□ 0.36
SHMT1P1-201ENST00000419974 HIBADHP31937 336 aaKnown RBP17.27■□□□□ 0.36
SHMT1P1-201ENST00000419974 BCAMP50895 628 aa17.27■□□□□ 0.36
SHMT1P1-201ENST00000419974 SPATA5Q8NB90 893 aa17.27■□□□□ 0.36
SHMT1P1-201ENST00000419974 HMG20BQ9P0W2 317 aa17.27■□□□□ 0.36
SHMT1P1-201ENST00000419974 DENND2AQ9ULE3 1009 aa17.27■□□□□ 0.36
SHMT1P1-201ENST00000419974 REC8O95072 547 aa17.26■□□□□ 0.35
SHMT1P1-201ENST00000419974 C1QTNF8P60827 252 aa17.26■□□□□ 0.35
SHMT1P1-201ENST00000419974 RASGRF1Q13972 1273 aa17.26■□□□□ 0.35
SHMT1P1-201ENST00000419974 SCARF1Q14162 830 aa17.26■□□□□ 0.35
SHMT1P1-201ENST00000419974 ARHGAP27Q6ZUM4 889 aa17.26■□□□□ 0.35
SHMT1P1-201ENST00000419974 TTLL6Q8N841 843 aa17.26■□□□□ 0.35
SHMT1P1-201ENST00000419974 ZNF622Q969S3 477 aaKnown RBP eCLIP17.26■□□□□ 0.35
SHMT1P1-201ENST00000419974 ESYT1Q9BSJ8 1104 aa17.26■□□□□ 0.35
SHMT1P1-201ENST00000419974 VPS33BQ9H267 617 aa17.26■□□□□ 0.35
SHMT1P1-201ENST00000419974 UPF2Q9HAU5 1272 aaKnown RBP17.26■□□□□ 0.35
SHMT1P1-201ENST00000419974 NSFL1CQ9UNZ2 370 aaKnown RBP17.26■□□□□ 0.35
SHMT1P1-201ENST00000419974 SEC24BO95487 1268 aa17.25■□□□□ 0.35
SHMT1P1-201ENST00000419974 IL1R1P14778 569 aa17.25■□□□□ 0.35
SHMT1P1-201ENST00000419974 SOGA3Q5TF21 947 aa17.25■□□□□ 0.35
SHMT1P1-201ENST00000419974 MPNDQ8N594 471 aa17.25■□□□□ 0.35
SHMT1P1-201ENST00000419974 TDRD7Q8NHU6 1098 aaKnown RBP17.25■□□□□ 0.35
SHMT1P1-201ENST00000419974 POLLQ9UGP5 575 aa17.25■□□□□ 0.35
SHMT1P1-201ENST00000419974 SALL1Q9NSC2 1324 aa17.25■□□□□ 0.35
SHMT1P1-201ENST00000419974 AKAP11Q9UKA4 1901 aa17.25■□□□□ 0.35
SHMT1P1-201ENST00000419974 GOLIM4O00461 696 aa17.24■□□□□ 0.35
SHMT1P1-201ENST00000419974 SGSM2O43147 1006 aa17.24■□□□□ 0.35
SHMT1P1-201ENST00000419974 CYP2E1P05181 493 aaPredicted RBP17.24■□□□□ 0.35
SHMT1P1-201ENST00000419974 ZAP70P43403 619 aa17.24■□□□□ 0.35
SHMT1P1-201ENST00000419974 ZSCAN25Q6NSZ9 544 aa17.24■□□□□ 0.35
SHMT1P1-201ENST00000419974 ZNF804AQ7Z570 1209 aa17.24■□□□□ 0.35
SHMT1P1-201ENST00000419974 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
SHMT1P1-201ENST00000419974 FSD1Q9BTV5 496 aa17.24■□□□□ 0.35
SHMT1P1-201ENST00000419974 GPBP1L1Q9HC44 474 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms