RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 USP17L4A6NCW7 530 aa17.74■□□□□ 0.43
NOD1-205ENST00000419799 USP17L1Q7RTZ2 530 aa17.74■□□□□ 0.43
NOD1-205ENST00000419799 CCDC152Q4G0S7 254 aa17.73■□□□□ 0.43
NOD1-205ENST00000419799 XDHP47989 1333 aa17.72■□□□□ 0.43
NOD1-205ENST00000419799 ATP2B4P23634 1241 aa17.72■□□□□ 0.43
NOD1-205ENST00000419799 SREBF2Q12772 1141 aa17.72■□□□□ 0.43
NOD1-205ENST00000419799 FKTNO75072 461 aa17.71■□□□□ 0.43
NOD1-205ENST00000419799 NF2P35240 595 aa17.71■□□□□ 0.43
NOD1-205ENST00000419799 NBPF9Q3BBW0 867 aa17.71■□□□□ 0.43
NOD1-205ENST00000419799 PRAMEF18Q5VWM3 479 aa17.71■□□□□ 0.43
NOD1-205ENST00000419799 PHAXQ9H814 394 aaKnown RBP17.71■□□□□ 0.43
NOD1-205ENST00000419799 SCAF8Q9UPN6 1271 aaKnown RBP17.71■□□□□ 0.43
NOD1-205ENST00000419799 PDE8AO60658 829 aa17.7■□□□□ 0.42
NOD1-205ENST00000419799 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
NOD1-205ENST00000419799 TTLL12Q14166 644 aaPredicted RBP17.7■□□□□ 0.42
NOD1-205ENST00000419799 RIC3Q7Z5B4 369 aa17.7■□□□□ 0.42
NOD1-205ENST00000419799 CCDC191Q8NCU4 936 aa17.7■□□□□ 0.42
NOD1-205ENST00000419799 FANCIQ9NVI1 1328 aa17.7■□□□□ 0.42
NOD1-205ENST00000419799 WNT10BO00744 389 aa17.69■□□□□ 0.42
NOD1-205ENST00000419799 MMP14P50281 582 aa17.69■□□□□ 0.42
NOD1-205ENST00000419799 GOLGA2Q08379 1002 aa17.69■□□□□ 0.42
NOD1-205ENST00000419799 TWISTNBQ3B726 338 aaPredicted RBP17.69■□□□□ 0.42
NOD1-205ENST00000419799 CCDC30Q5VVM6 783 aa17.69■□□□□ 0.42
NOD1-205ENST00000419799 ANKRD18AQ8IVF6 992 aa17.69■□□□□ 0.42
NOD1-205ENST00000419799 WDR63Q8IWG1 891 aa17.69■□□□□ 0.42
NOD1-205ENST00000419799 OGFOD1Q8N543 542 aa17.69■□□□□ 0.42
NOD1-205ENST00000419799 SPINK5Q9NQ38 1064 aaPredicted RBP17.69■□□□□ 0.42
NOD1-205ENST00000419799 IL16Q14005 1332 aa17.69■□□□□ 0.42
NOD1-205ENST00000419799 MYO3BQ8WXR4 1341 aa17.69■□□□□ 0.42
NOD1-205ENST00000419799 MED23Q9ULK4 1368 aa17.68■□□□□ 0.42
NOD1-205ENST00000419799 ALDH1A1P00352 501 aa17.68■□□□□ 0.42
NOD1-205ENST00000419799 DACT2Q5SW24 774 aa17.68■□□□□ 0.42
NOD1-205ENST00000419799 PTPN12Q05209 780 aaKnown RBP17.67■□□□□ 0.42
NOD1-205ENST00000419799 MKRN3Q13064 507 aaKnown RBP17.67■□□□□ 0.42
NOD1-205ENST00000419799 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
NOD1-205ENST00000419799 ARMC9Q7Z3E5 817 aa17.67■□□□□ 0.42
NOD1-205ENST00000419799 R3HDMLQ9H3Y0 253 aa17.67■□□□□ 0.42
NOD1-205ENST00000419799 EXOSC9Q06265 439 aaKnown RBP17.66■□□□□ 0.42
NOD1-205ENST00000419799 HABP4Q5JVS0 413 aaKnown RBP17.66■□□□□ 0.42
NOD1-205ENST00000419799 LDLRAD1Q5T700 205 aa17.66■□□□□ 0.42
NOD1-205ENST00000419799 STRIP1Q5VSL9 837 aa17.66■□□□□ 0.42
NOD1-205ENST00000419799 SPRYD7Q5W111 196 aa17.66■□□□□ 0.42
NOD1-205ENST00000419799 INTS3Q68E01 1043 aaKnown RBP17.66■□□□□ 0.42
NOD1-205ENST00000419799 MYD88Q99836 296 aa17.66■□□□□ 0.42
NOD1-205ENST00000419799 STK31Q9BXU1 1019 aa17.66■□□□□ 0.42
NOD1-205ENST00000419799 CWC25Q9NXE8 425 aaPredicted RBP17.66■□□□□ 0.42
NOD1-205ENST00000419799 INHBEP58166 350 aa17.65■□□□□ 0.42
NOD1-205ENST00000419799 APOBEC3FQ8IUX4 373 aaKnown RBP17.65■□□□□ 0.42
NOD1-205ENST00000419799 CCDC85AQ96PX6 553 aaPredicted RBP17.65■□□□□ 0.42
NOD1-205ENST00000419799 CDC5LQ99459 802 aaKnown RBP17.65■□□□□ 0.42
NOD1-205ENST00000419799 ZNF646O15015 1829 aaPredicted RBP17.65■□□□□ 0.42
NOD1-205ENST00000419799 DIEXFQ68CQ4 756 aaKnown RBP17.64■□□□□ 0.41
NOD1-205ENST00000419799 MXD3Q9BW11 206 aa17.64■□□□□ 0.41
NOD1-205ENST00000419799 COA1Q9GZY4 146 aa17.64■□□□□ 0.41
NOD1-205ENST00000419799 BSDC1Q9NW68 430 aaPredicted RBP17.64■□□□□ 0.41
NOD1-205ENST00000419799 MINPP1Q9UNW1 487 aa17.64■□□□□ 0.41
NOD1-205ENST00000419799 MANSC4A6NHS7 340 aaPredicted RBP17.63■□□□□ 0.41
NOD1-205ENST00000419799 WTIPA6NIX2 430 aaPredicted RBP17.63■□□□□ 0.41
NOD1-205ENST00000419799 CCER2I3L3R5 266 aa17.63■□□□□ 0.41
NOD1-205ENST00000419799 G2E3Q7L622 706 aa17.63■□□□□ 0.41
NOD1-205ENST00000419799 METTL22Q9BUU2 404 aaPredicted RBP17.63■□□□□ 0.41
NOD1-205ENST00000419799 MYH16Q9H6N6 1097 aa17.63■□□□□ 0.41
NOD1-205ENST00000419799 COL1A1P02452 1464 aaPredicted RBP17.63■□□□□ 0.41
NOD1-205ENST00000419799 SASH1O94885 1247 aa17.62■□□□□ 0.41
NOD1-205ENST00000419799 SLC4A2P04920 1241 aa17.62■□□□□ 0.41
NOD1-205ENST00000419799 CCT4P50991 539 aaKnown RBP17.62■□□□□ 0.41
NOD1-205ENST00000419799 CTSWP56202 376 aa17.62■□□□□ 0.41
NOD1-205ENST00000419799 OTOP1Q7RTM1 612 aa17.62■□□□□ 0.41
NOD1-205ENST00000419799 IFNL1Q8IU54 200 aa17.62■□□□□ 0.41
NOD1-205ENST00000419799 JARID2Q92833 1246 aaPredicted RBP17.62■□□□□ 0.41
NOD1-205ENST00000419799 ZBED3Q96IU2 234 aaPredicted RBP17.62■□□□□ 0.41
NOD1-205ENST00000419799 CHMP4AQ9BY43 222 aa17.62■□□□□ 0.41
NOD1-205ENST00000419799 ANGEL1Q9UNK9 670 aaKnown RBP17.62■□□□□ 0.41
NOD1-205ENST00000419799 TRIM17Q9Y577 477 aa17.62■□□□□ 0.41
NOD1-205ENST00000419799 POTEFA5A3E0 1075 aa17.61■□□□□ 0.41
NOD1-205ENST00000419799 DDX58O95786 925 aaKnown RBP17.61■□□□□ 0.41
NOD1-205ENST00000419799 PRKG1Q13976 671 aa17.61■□□□□ 0.41
NOD1-205ENST00000419799 MAP3K11Q16584 847 aa17.61■□□□□ 0.41
NOD1-205ENST00000419799 MIER1Q8N108 512 aa17.61■□□□□ 0.41
NOD1-205ENST00000419799 TTLL11Q8NHH1 800 aa17.61■□□□□ 0.41
NOD1-205ENST00000419799 MAP3K2Q9Y2U5 619 aa17.61■□□□□ 0.41
NOD1-205ENST00000419799 VAMP4O75379 141 aa17.6■□□□□ 0.41
NOD1-205ENST00000419799 ZBTB48P10074 688 aaPredicted RBP17.6■□□□□ 0.41
NOD1-205ENST00000419799 TTLL5Q6EMB2 1281 aa17.6■□□□□ 0.41
NOD1-205ENST00000419799 FBXW7Q969H0 707 aa17.6■□□□□ 0.41
NOD1-205ENST00000419799 LEMD3Q9Y2U8 911 aa17.6■□□□□ 0.41
NOD1-205ENST00000419799 LAMB1P07942 1786 aa17.59■□□□□ 0.41
NOD1-205ENST00000419799 RBBP6Q7Z6E9 1792 aaKnown RBP17.59■□□□□ 0.41
NOD1-205ENST00000419799 PI4KAP2A4QPH2 592 aa17.59■□□□□ 0.41
NOD1-205ENST00000419799 UNCXA6NJT0 531 aa17.59■□□□□ 0.41
NOD1-205ENST00000419799 TXNRD3Q86VQ6 643 aa17.59■□□□□ 0.41
NOD1-205ENST00000419799 PI4KAP1Q8N8J0 262 aa17.59■□□□□ 0.41
NOD1-205ENST00000419799 SLC10A4Q96EP9 437 aa17.59■□□□□ 0.41
NOD1-205ENST00000419799 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
NOD1-205ENST00000419799 KIAA0825Q8IV33 1275 aa17.58■□□□□ 0.4
NOD1-205ENST00000419799 ERO1AQ96HE7 468 aa17.58■□□□□ 0.4
NOD1-205ENST00000419799 GREM2Q9H772 168 aa17.58■□□□□ 0.4
NOD1-205ENST00000419799 PTPN22Q9Y2R2 807 aa17.58■□□□□ 0.4
NOD1-205ENST00000419799 PPP2R3BQ9Y5P8 575 aa17.58■□□□□ 0.4
NOD1-205ENST00000419799 IGF2BP3O00425 579 aaKnown RBP eCLIP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms