RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 PPFIA3O75145 1194 aa18.17■□□□□ 0.5
SEC24D-202ENST00000419654 ITGA6P23229 1130 aa18.17■□□□□ 0.5
SEC24D-202ENST00000419654 CLEC4GQ6UXB4 293 aa18.17■□□□□ 0.5
SEC24D-202ENST00000419654 HIP1O00291 1037 aa18.16■□□□□ 0.5
SEC24D-202ENST00000419654 UTP14AQ9BVJ6 771 aaKnown RBP18.16■□□□□ 0.5
SEC24D-202ENST00000419654 QTRT2Q9H974 415 aaKnown RBP18.16■□□□□ 0.5
SEC24D-202ENST00000419654 CEP126Q9P2H0 1117 aa18.16■□□□□ 0.5
SEC24D-202ENST00000419654 SH3TC1Q8TE82 1336 aa18.16■□□□□ 0.5
SEC24D-202ENST00000419654 RGL2O15211 777 aa18.16■□□□□ 0.5
SEC24D-202ENST00000419654 TIMM10P62072 90 aa18.16■□□□□ 0.5
SEC24D-202ENST00000419654 CDC37L1Q7L3B6 337 aa18.16■□□□□ 0.5
SEC24D-202ENST00000419654 LRRC2Q9BYS8 371 aa18.16■□□□□ 0.5
SEC24D-202ENST00000419654 ZNF652Q9Y2D9 606 aa18.16■□□□□ 0.5
SEC24D-202ENST00000419654 LAMB2P55268 1798 aa18.16■□□□□ 0.5
SEC24D-202ENST00000419654 DDX60Q8IY21 1712 aaKnown RBP18.16■□□□□ 0.5
SEC24D-202ENST00000419654 FOSBP53539 338 aa18.15■□□□□ 0.5
SEC24D-202ENST00000419654 RBM10P98175 930 aaKnown RBP18.15■□□□□ 0.5
SEC24D-202ENST00000419654 TAF7LQ5H9L4 462 aa18.15■□□□□ 0.5
SEC24D-202ENST00000419654 LARP1BQ659C4 914 aaKnown RBP18.15■□□□□ 0.5
SEC24D-202ENST00000419654 MAP4K1Q92918 833 aa18.15■□□□□ 0.5
SEC24D-202ENST00000419654 HAUS7Q99871 368 aa18.15■□□□□ 0.5
SEC24D-202ENST00000419654 ZKSCAN5Q9Y2L8 839 aa18.15■□□□□ 0.5
SEC24D-202ENST00000419654 TAF1LQ8IZX4 1826 aa18.15■□□□□ 0.5
SEC24D-202ENST00000419654 SCN7AQ01118 1682 aa18.15■□□□□ 0.5
SEC24D-202ENST00000419654 ANKRD18BA2A2Z9 1011 aa18.15■□□□□ 0.5
SEC24D-202ENST00000419654 OFD1O75665 1012 aa18.15■□□□□ 0.5
SEC24D-202ENST00000419654 CCDC183Q5T5S1 534 aa18.15■□□□□ 0.5
SEC24D-202ENST00000419654 TFIP11Q9UBB9 837 aaKnown RBP18.15■□□□□ 0.5
SEC24D-202ENST00000419654 NIP7Q9Y221 180 aaKnown RBP eCLIP18.15■□□□□ 0.5
SEC24D-202ENST00000419654 RIPOR2Q9Y4F9 1068 aa18.15■□□□□ 0.5
SEC24D-202ENST00000419654 A0A1B0GUL7 405 aa18.14■□□□□ 0.5
SEC24D-202ENST00000419654 NTSR2O95665 410 aa18.14■□□□□ 0.5
SEC24D-202ENST00000419654 NEUROD6Q96NK8 337 aa18.14■□□□□ 0.5
SEC24D-202ENST00000419654 SNRKQ9NRH2 765 aa18.14■□□□□ 0.5
SEC24D-202ENST00000419654 RIC1Q4ADV7 1423 aa18.14■□□□□ 0.49
SEC24D-202ENST00000419654 LRP5O75197 1615 aa18.14■□□□□ 0.49
SEC24D-202ENST00000419654 CAMK4Q16566 473 aa18.14■□□□□ 0.49
SEC24D-202ENST00000419654 DDX46Q7L014 1031 aaKnown RBP18.14■□□□□ 0.49
SEC24D-202ENST00000419654 C17orf53Q8N3J3 647 aaPredicted RBP18.14■□□□□ 0.49
SEC24D-202ENST00000419654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.13■□□□□ 0.49
SEC24D-202ENST00000419654 UBE2HP62256 183 aa18.13■□□□□ 0.49
SEC24D-202ENST00000419654 BLOC1S2Q6QNY1 142 aa18.13■□□□□ 0.49
SEC24D-202ENST00000419654 CCNL1Q9UK58 526 aaPredicted RBP18.13■□□□□ 0.49
SEC24D-202ENST00000419654 AKAP2Q9Y2D5 859 aa18.13■□□□□ 0.49
SEC24D-202ENST00000419654 RFX7Q2KHR2 1363 aa18.13■□□□□ 0.49
SEC24D-202ENST00000419654 RPS6KA4O75676 772 aa18.13■□□□□ 0.49
SEC24D-202ENST00000419654 PHF14O94880 888 aa18.13■□□□□ 0.49
SEC24D-202ENST00000419654 HSP90AA2PQ14568 343 aaPredicted RBP18.13■□□□□ 0.49
SEC24D-202ENST00000419654 CCDC39Q9UFE4 941 aa18.13■□□□□ 0.49
SEC24D-202ENST00000419654 LDHAL6AQ6ZMR3 332 aa18.12■□□□□ 0.49
SEC24D-202ENST00000419654 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.12■□□□□ 0.491e-6■■■■□ 21.6
SEC24D-202ENST00000419654 DDX11Q96FC9 970 aa18.12■□□□□ 0.49
SEC24D-202ENST00000419654 BCL11BQ9C0K0 894 aaPredicted RBP18.12■□□□□ 0.49
SEC24D-202ENST00000419654 TTC12Q9H892 705 aaPredicted RBP18.11■□□□□ 0.49
SEC24D-202ENST00000419654 FAM177BA6PVY3 158 aa18.11■□□□□ 0.49
SEC24D-202ENST00000419654 JAK2O60674 1132 aa18.11■□□□□ 0.49
SEC24D-202ENST00000419654 ADCY5O95622 1261 aa18.11■□□□□ 0.49
SEC24D-202ENST00000419654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.11■□□□□ 0.49
SEC24D-202ENST00000419654 ZSCAN31Q96LW9 406 aaPredicted RBP18.11■□□□□ 0.49
SEC24D-202ENST00000419654 ARID3AQ99856 593 aa18.11■□□□□ 0.49
SEC24D-202ENST00000419654 HSP90B1P14625 803 aaKnown RBP18.1■□□□□ 0.49
SEC24D-202ENST00000419654 TOB2Q14106 344 aaPredicted RBP18.1■□□□□ 0.49
SEC24D-202ENST00000419654 TMEM87AQ8NBN3 555 aa18.1■□□□□ 0.49
SEC24D-202ENST00000419654 TM6SF1Q9BZW5 370 aa18.1■□□□□ 0.49
SEC24D-202ENST00000419654 SH2B1Q9NRF2 756 aaPredicted RBP18.1■□□□□ 0.49
SEC24D-202ENST00000419654 RTL9Q8NET4 1388 aa18.1■□□□□ 0.49
SEC24D-202ENST00000419654 BRWD3Q6RI45 1802 aa18.1■□□□□ 0.49
SEC24D-202ENST00000419654 SPEF2Q9C093 1822 aa18.1■□□□□ 0.49
SEC24D-202ENST00000419654 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.1■□□□□ 0.49
SEC24D-202ENST00000419654 TTC6Q86TZ1 520 aa18.1■□□□□ 0.49
SEC24D-202ENST00000419654 VGLL2Q8N8G2 317 aa18.1■□□□□ 0.49
SEC24D-202ENST00000419654 BCL2L12Q9HB09 334 aa18.1■□□□□ 0.49
SEC24D-202ENST00000419654 NARFQ9UHQ1 456 aa18.1■□□□□ 0.49
SEC24D-202ENST00000419654 MED23Q9ULK4 1368 aa18.09■□□□□ 0.49
SEC24D-202ENST00000419654 HS1BP3Q53T59 392 aa18.09■□□□□ 0.49
SEC24D-202ENST00000419654 METTL24Q5JXM2 366 aa18.09■□□□□ 0.49
SEC24D-202ENST00000419654 TICAM2Q86XR7 235 aa18.09■□□□□ 0.49
SEC24D-202ENST00000419654 ATP6V1DQ9Y5K8 247 aa18.09■□□□□ 0.49
SEC24D-202ENST00000419654 C4BP0C0L5 1744 aa18.09■□□□□ 0.49
SEC24D-202ENST00000419654 TAF5LO75529 589 aa18.09■□□□□ 0.49
SEC24D-202ENST00000419654 RPS6KB1P23443 525 aa18.09■□□□□ 0.49
SEC24D-202ENST00000419654 XAGE2Q96GT9 111 aa18.09■□□□□ 0.49
SEC24D-202ENST00000419654 CNNM1Q9NRU3 951 aa18.09■□□□□ 0.49
SEC24D-202ENST00000419654 EP400Q96L91 3159 aa18.09■□□□□ 0.49
SEC24D-202ENST00000419654 A0A0G2JLW4 131 aa18.08■□□□□ 0.49
SEC24D-202ENST00000419654 GNPATO15228 680 aa18.08■□□□□ 0.49
SEC24D-202ENST00000419654 LIG1P18858 919 aa18.08■□□□□ 0.49
SEC24D-202ENST00000419654 SMIM5Q71RC9 77 aa18.08■□□□□ 0.49
SEC24D-202ENST00000419654 KBTBD3Q8NAB2 608 aa18.08■□□□□ 0.49
SEC24D-202ENST00000419654 KCNB2Q92953 911 aa18.08■□□□□ 0.49
SEC24D-202ENST00000419654 ZNF500O60304 480 aaPredicted RBP18.08■□□□□ 0.48
SEC24D-202ENST00000419654 PSMA5P28066 241 aa18.08■□□□□ 0.48
SEC24D-202ENST00000419654 ADORA1P30542 326 aa18.08■□□□□ 0.48
SEC24D-202ENST00000419654 CKAP2LQ8IYA6 745 aa18.08■□□□□ 0.48
SEC24D-202ENST00000419654 NAP1L2Q9ULW6 460 aaPredicted RBP18.08■□□□□ 0.48
SEC24D-202ENST00000419654 AP5Z1O43299 807 aa18.08■□□□□ 0.48
SEC24D-202ENST00000419654 CEBPZQ03701 1054 aaKnown RBP18.08■□□□□ 0.48
SEC24D-202ENST00000419654 RNF20Q5VTR2 975 aa18.08■□□□□ 0.48
SEC24D-202ENST00000419654 PAG1Q9NWQ8 432 aa18.08■□□□□ 0.48
SEC24D-202ENST00000419654 IFIT1P09914 478 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms