RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 FAM198AQ9UFP1 575 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 TRMT112Q9UI30 125 aaKnown RBP8.51□□□□□ -1.05
LINC02539-202ENST00000419220 NUP98P52948 1817 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 COL24A1Q17RW2 1714 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 KIF16BQ96L93 1317 aa8.51□□□□□ -1.05
LINC02539-202ENST00000419220 IBTKQ9P2D0 1353 aaPredicted RBP8.5□□□□□ -1.05
LINC02539-202ENST00000419220 PI4KAP2A4QPH2 592 aa8.5□□□□□ -1.05
LINC02539-202ENST00000419220 OATP04181 439 aa8.5□□□□□ -1.05
LINC02539-202ENST00000419220 CLCN1P35523 988 aa8.5□□□□□ -1.05
LINC02539-202ENST00000419220 ZNF34Q8IZ26 560 aa8.5□□□□□ -1.05
LINC02539-202ENST00000419220 TRMT2AQ8IZ69 625 aaKnown RBP8.5□□□□□ -1.05
LINC02539-202ENST00000419220 PI4KAP1Q8N8J0 262 aa8.5□□□□□ -1.05
LINC02539-202ENST00000419220 TTC13Q8NBP0 860 aa8.5□□□□□ -1.05
LINC02539-202ENST00000419220 DNAAF4Q8WXU2 420 aa8.5□□□□□ -1.05
LINC02539-202ENST00000419220 RPGRQ92834 1020 aaKnown RBP8.5□□□□□ -1.05
LINC02539-202ENST00000419220 DDRGK1Q96HY6 314 aa8.5□□□□□ -1.05
LINC02539-202ENST00000419220 METTL22Q9BUU2 404 aaPredicted RBP8.5□□□□□ -1.05
LINC02539-202ENST00000419220 API5Q9BZZ5 524 aaKnown RBP8.5□□□□□ -1.05
LINC02539-202ENST00000419220 GPCPD1Q9NPB8 672 aa8.5□□□□□ -1.05
LINC02539-202ENST00000419220 CWC25Q9NXE8 425 aaPredicted RBP8.5□□□□□ -1.05
LINC02539-202ENST00000419220 ATP10DQ9P241 1426 aa8.5□□□□□ -1.05
LINC02539-202ENST00000419220 SH3TC1Q8TE82 1336 aa8.5□□□□□ -1.05
LINC02539-202ENST00000419220 BCORQ6W2J9 1755 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 FAM177BA6PVY3 158 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 ANXA1P04083 346 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 GPTP24298 496 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 HLFQ16534 295 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 DALRD3Q5D0E6 543 aaKnown RBP8.49□□□□□ -1.05
LINC02539-202ENST00000419220 SMIM5Q71RC9 77 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 SAMD7Q7Z3H4 446 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 AMIGO3Q86WK7 504 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 C2CD5Q86YS7 1000 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 PXYLP1Q8TE99 480 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 ZNF516Q92618 1163 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 ARHGAP45Q92619 1136 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 ZNF622Q969S3 477 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC02539-202ENST00000419220 MASTLQ96GX5 879 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 RBM17Q96I25 401 aaKnown RBP8.49□□□□□ -1.05
LINC02539-202ENST00000419220 MYD88Q99836 296 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 PHAXQ9H814 394 aaKnown RBP8.49□□□□□ -1.05
LINC02539-202ENST00000419220 TSKSQ9UJT2 592 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 MAP3K2Q9Y2U5 619 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 SCN7AQ01118 1682 aa8.49□□□□□ -1.05
LINC02539-202ENST00000419220 POTECB2RU33 542 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 C3orf80F5H4A9 247 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 NPR1P16066 1061 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 PRR20EP86478 221 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 PRR20CP86479 221 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 PRR20DP86480 221 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 PRR20BP86481 221 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 PRR20AP86496 221 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 PROSER3Q2NL68 480 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 SLC4A10Q6U841 1118 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 TRIM67Q6ZTA4 783 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 DDX46Q7L014 1031 aaKnown RBP8.48□□□□□ -1.05
LINC02539-202ENST00000419220 TMC4Q7Z404 712 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 TTLL6Q8N841 843 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 ZBTB38Q8NAP3 1195 aaPredicted RBP8.48□□□□□ -1.05
LINC02539-202ENST00000419220 LINS1Q8NG48 757 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 SRCIN1Q9C0H9 1055 aa8.48□□□□□ -1.05
LINC02539-202ENST00000419220 C9orf78Q9NZ63 289 aaPredicted RBP8.48□□□□□ -1.05
LINC02539-202ENST00000419220 RBM27Q9P2N5 1060 aaKnown RBP8.48□□□□□ -1.05
LINC02539-202ENST00000419220 ALDH1L1O75891 902 aa8.47□□□□□ -1.05
LINC02539-202ENST00000419220 SSTR3P32745 418 aaPredicted RBP8.47□□□□□ -1.05
LINC02539-202ENST00000419220 CCT4P50991 539 aaKnown RBP8.47□□□□□ -1.05
LINC02539-202ENST00000419220 INSM1Q01101 510 aaPredicted RBP8.47□□□□□ -1.05
LINC02539-202ENST00000419220 DDR1Q08345 913 aa8.47□□□□□ -1.05
LINC02539-202ENST00000419220 SLC10A5Q5PT55 438 aa8.47□□□□□ -1.05
LINC02539-202ENST00000419220 CC2D2BQ6DHV5 1058 aa8.47□□□□□ -1.05
LINC02539-202ENST00000419220 STYK1Q6J9G0 422 aa8.47□□□□□ -1.05
LINC02539-202ENST00000419220 PRR5LQ6MZQ0 368 aa8.47□□□□□ -1.05
LINC02539-202ENST00000419220 LRP10Q7Z4F1 713 aa8.47□□□□□ -1.05
LINC02539-202ENST00000419220 NLRP10Q86W26 655 aa8.47□□□□□ -1.05
LINC02539-202ENST00000419220 FTSJ3Q8IY81 847 aaKnown RBP8.47□□□□□ -1.05
LINC02539-202ENST00000419220 RBM46Q8TBY0 533 aaKnown RBP8.47□□□□□ -1.05
LINC02539-202ENST00000419220 ISCA1Q9BUE6 129 aa8.47□□□□□ -1.05
LINC02539-202ENST00000419220 DAXXQ9UER7 740 aaPredicted RBP8.47□□□□□ -1.05
LINC02539-202ENST00000419220 ANKRD36CQ5JPF3 1778 aa8.46□□□□□ -1.05
LINC02539-202ENST00000419220 TCERG1O14776 1098 aaKnown RBP8.46□□□□□ -1.06
LINC02539-202ENST00000419220 PCCAP05165 728 aaPredicted RBP8.46□□□□□ -1.06
LINC02539-202ENST00000419220 SLC19A1P41440 591 aa8.46□□□□□ -1.06
LINC02539-202ENST00000419220 CCDC152Q4G0S7 254 aa8.46□□□□□ -1.06
LINC02539-202ENST00000419220 SUSD4Q5VX71 490 aa8.46□□□□□ -1.06
LINC02539-202ENST00000419220 NUDT18Q6ZVK8 323 aa8.46□□□□□ -1.06
LINC02539-202ENST00000419220 SSH1Q8WYL5 1049 aa8.46□□□□□ -1.06
LINC02539-202ENST00000419220 BCS1LQ9Y276 419 aa8.46□□□□□ -1.06
LINC02539-202ENST00000419220 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.06
LINC02539-202ENST00000419220 AFDNP55196 1824 aaKnown RBP8.45□□□□□ -1.06
LINC02539-202ENST00000419220 A0A0G2JLW4 131 aa8.45□□□□□ -1.06
LINC02539-202ENST00000419220 ATP5J2-PTCD1G3V325 749 aa8.45□□□□□ -1.06
LINC02539-202ENST00000419220 SMAPO00193 183 aa8.45□□□□□ -1.06
LINC02539-202ENST00000419220 IRS4O14654 1257 aaPredicted RBP8.45□□□□□ -1.06
LINC02539-202ENST00000419220 PDE8AO60658 829 aa8.45□□□□□ -1.06
LINC02539-202ENST00000419220 BBOX1O75936 387 aa8.45□□□□□ -1.06
LINC02539-202ENST00000419220 DPEP1P16444 411 aa8.45□□□□□ -1.06
LINC02539-202ENST00000419220 RARSP54136 660 aaKnown RBP8.45□□□□□ -1.06
LINC02539-202ENST00000419220 ERFEQ4G0M1 354 aa8.45□□□□□ -1.06
LINC02539-202ENST00000419220 ZKSCAN2Q63HK3 967 aa8.45□□□□□ -1.06
LINC02539-202ENST00000419220 RTKN2Q8IZC4 609 aa8.45□□□□□ -1.06
LINC02539-202ENST00000419220 FRAT1Q92837 279 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms