RNA–Protein interactions for RNA: ENST00000418378.5

SPARCL1-202, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPARCL1, Length 2,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-202ENST00000418378 ECHDC1Q9NTX5 307 aa6.83□□□□□ -1.32
SPARCL1-202ENST00000418378 CEP126Q9P2H0 1117 aa6.83□□□□□ -1.32
SPARCL1-202ENST00000418378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 SH3BP5O60239 455 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 POLA2Q14181 598 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 CHST3Q7LGC8 479 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 KRT27Q7Z3Y8 459 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 NBPF5PQ86XG9 351 aaPredicted RBP6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 RAB11FIP4Q86YS3 637 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 HSCBQ8IWL3 235 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 PMM1Q92871 262 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 LRRC37A3O60309 1634 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 CRYBG1Q9Y4K1 1723 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 IDH1O75874 414 aaKnown RBP6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 PARNO95453 639 aaKnown RBP6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 HAND2P61296 217 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 SCARF1Q14162 830 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 TNNI3KQ59H18 835 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 PRPF40BQ6NWY9 871 aaKnown RBP6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 MAMSTRQ6ZN01 415 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 KIAA1211Q6ZU35 1233 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 CCDC191Q8NCU4 936 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 ABCF2Q9UG63 623 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 RTCBQ9Y3I0 505 aaKnown RBP6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 FPGT-TNNI3KV9GXZ4 949 aa6.82□□□□□ -1.32
SPARCL1-202ENST00000418378 ITGB4P16144 1822 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 MYH14Q7Z406 1995 aaKnown RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 A0A0G2JLW4 131 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 CREB3O43889 395 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 CHMLP26374 656 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 OLFM4Q6UX06 510 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 DEFB132Q7Z7B7 95 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 CNTROBQ8N137 903 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 FNBP4Q8N3X1 1017 aaPredicted RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 PROCA1Q8NCQ7 364 aaPredicted RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 PI4K2BQ8TCG2 481 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 DDRGK1Q96HY6 314 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 CDCA7Q9BWT1 371 aaPredicted RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 PDGFDQ9GZP0 370 aaPredicted RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 CTDP1Q9Y5B0 961 aaPredicted RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 TOGARAM1Q9Y4F4 1720 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 TAF1P21675 1872 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 TNS2Q63HR2 1409 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 A0A0D9SFI3 127 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 H7C1W4 665 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 EIF5P55010 431 aaKnown RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 PTH1RQ03431 593 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 STK3Q13188 491 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 SDR16C5Q8N3Y7 309 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 TTLL11Q8NHH1 800 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 KCNV2Q8TDN2 545 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 ANP32BQ92688 251 aaKnown RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 TSPAN18Q96SJ8 248 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 TEX13AQ9BXU3 409 aaPredicted RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 ZHX1Q9UKY1 873 aaPredicted RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 TAF6LQ9Y6J9 622 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 USP54Q70EL1 1684 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 ERC2O15083 957 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 IFIT1P09914 478 aaKnown RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 CHAF1AQ13111 956 aaPredicted RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 NMIQ13287 307 aaPredicted RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 BECN1Q14457 450 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 TTC39AQ5SRH9 613 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 ZNF589Q86UQ0 364 aaPredicted RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 ZBTB38Q8NAP3 1195 aaPredicted RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 SETDB2Q96T68 719 aa6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 UTP14AQ9BVJ6 771 aaKnown RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 AFDNP55196 1824 aaKnown RBP6.81□□□□□ -1.32
SPARCL1-202ENST00000418378 DOT1LQ8TEK3 1739 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 CACNA1FO60840 1977 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 PLCH1Q4KWH8 1693 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 ANKRD18BA2A2Z9 1011 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 EN1Q05925 392 aaPredicted RBP6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 THRAP3Q9Y2W1 955 aaKnown RBP6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 PARP4Q9UKK3 1724 aaKnown RBP6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 SH3TC1Q8TE82 1336 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 COL15A1P39059 1388 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 COL14A1Q05707 1796 aaKnown RBP6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 KCPQ6ZWJ8 1503 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 EYA2O00167 538 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 GLRX3O76003 335 aaKnown RBP6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 CAMTA2O94983 1202 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 IL6STP40189 918 aaPredicted RBP6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 GYG1P46976 350 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 CASP7P55210 303 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 CTSWP56202 376 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 ATG9AQ7Z3C6 839 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 VPS37DQ86XT2 251 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 CELF1Q92879 486 aaKnown RBP6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 XAGE2Q96GT9 111 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 SPOCK3Q9BQ16 436 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 ESYT1Q9BSJ8 1104 aa6.8□□□□□ -1.32
SPARCL1-202ENST00000418378 SLIT2O94813 1529 aa6.79□□□□□ -1.32
SPARCL1-202ENST00000418378 PHKA1P46020 1223 aa6.79□□□□□ -1.32
SPARCL1-202ENST00000418378 RFX5P48382 616 aaPredicted RBP6.79□□□□□ -1.32
SPARCL1-202ENST00000418378 BCAMP50895 628 aa6.79□□□□□ -1.32
SPARCL1-202ENST00000418378 NBPF9Q3BBW0 867 aa6.79□□□□□ -1.32
SPARCL1-202ENST00000418378 TRAPPC3LQ5T215 181 aa6.79□□□□□ -1.32
SPARCL1-202ENST00000418378 VPS53Q5VIR6 699 aa6.79□□□□□ -1.32
SPARCL1-202ENST00000418378 POTEAQ6S8J7 498 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms