RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 C1orf115Q9H7X2 142 aa8.55□□□□□ -1.04
NCL-203ENST00000417652 TIAM2Q8IVF5 1701 aa8.54□□□□□ -1.04
NCL-203ENST00000417652 USP17L3A6NCW0 530 aa8.54□□□□□ -1.04
NCL-203ENST00000417652 USP17L4A6NCW7 530 aa8.54□□□□□ -1.04
NCL-203ENST00000417652 WTIPA6NIX2 430 aaPredicted RBP8.54□□□□□ -1.04
NCL-203ENST00000417652 SNAP23O00161 211 aa8.54□□□□□ -1.04
NCL-203ENST00000417652 PSMD14O00487 310 aa8.54□□□□□ -1.04
NCL-203ENST00000417652 ZBTB7BO15156 539 aaPredicted RBP8.54□□□□□ -1.04
NCL-203ENST00000417652 TOMM70O94826 608 aa8.54□□□□□ -1.04
NCL-203ENST00000417652 IL15P40933 162 aaPredicted RBP8.54□□□□□ -1.04
NCL-203ENST00000417652 GMPSP49915 693 aaPredicted RBP8.54□□□□□ -1.04
NCL-203ENST00000417652 UBE4AQ14139 1066 aa8.54□□□□□ -1.04
NCL-203ENST00000417652 PDE3AQ14432 1141 aa8.54□□□□□ -1.04
NCL-203ENST00000417652 MVPQ14764 893 aaKnown RBP8.54□□□□□ -1.04
NCL-203ENST00000417652 USP17L1Q7RTZ2 530 aa8.54□□□□□ -1.04
NCL-203ENST00000417652 PA2G4Q9UQ80 394 aaKnown RBP8.54□□□□□ -1.04
NCL-203ENST00000417652 RIPOR2Q9Y4F9 1068 aa8.54□□□□□ -1.04
NCL-203ENST00000417652 MED23Q9ULK4 1368 aa8.53□□□□□ -1.04
NCL-203ENST00000417652 KIF3CO14782 793 aa8.53□□□□□ -1.04
NCL-203ENST00000417652 SURF6O75683 361 aaKnown RBP8.53□□□□□ -1.04
NCL-203ENST00000417652 PDE8BO95263 885 aa8.53□□□□□ -1.04
NCL-203ENST00000417652 SLC5A1P13866 664 aa8.53□□□□□ -1.04
NCL-203ENST00000417652 HIBADHP31937 336 aaKnown RBP8.53□□□□□ -1.04
NCL-203ENST00000417652 EPHX2P34913 555 aa8.53□□□□□ -1.04
NCL-203ENST00000417652 ATP8B2P98198 1209 aa8.53□□□□□ -1.04
NCL-203ENST00000417652 PTPN12Q05209 780 aaKnown RBP8.53□□□□□ -1.04
NCL-203ENST00000417652 PUM3Q15397 648 aaKnown RBP8.53□□□□□ -1.04
NCL-203ENST00000417652 GORABQ5T7V8 394 aa8.53□□□□□ -1.04
NCL-203ENST00000417652 RBM26Q5T8P6 1007 aaKnown RBP8.53□□□□□ -1.04
NCL-203ENST00000417652 TTLL5Q6EMB2 1281 aa8.53□□□□□ -1.04
NCL-203ENST00000417652 PNMA8AQ86V59 439 aaPredicted RBP8.53□□□□□ -1.04
NCL-203ENST00000417652 BCL11AQ9H165 835 aa8.53□□□□□ -1.04
NCL-203ENST00000417652 KCNQ5Q9NR82 932 aa8.53□□□□□ -1.04
NCL-203ENST00000417652 CNOT7Q9UIV1 285 aaKnown RBP8.53□□□□□ -1.04
NCL-203ENST00000417652 FBXO3Q9UK99 471 aa8.53□□□□□ -1.04
NCL-203ENST00000417652 ZBTB12Q9Y330 459 aaPredicted RBP8.53□□□□□ -1.04
NCL-203ENST00000417652 SNED1Q8TER0 1413 aa8.53□□□□□ -1.04
NCL-203ENST00000417652 LRRC37AA6NMS7 1700 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 YDJCA8MPS7 323 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 HMMRO75330 724 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 CIAO1O76071 339 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 RPS12P25398 132 aaKnown RBP8.52□□□□□ -1.05
NCL-203ENST00000417652 EPS15P42566 896 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 GYG1P46976 350 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 RFX5P48382 616 aaPredicted RBP8.52□□□□□ -1.05
NCL-203ENST00000417652 C1QTNF8P60827 252 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 GTF2IP78347 998 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 ATP2B3Q16720 1220 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 TXNRD3Q86VQ6 643 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 OGFOD1Q8N543 542 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 SMC1BQ8NDV3 1235 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 RBM46Q8TBY0 533 aaKnown RBP8.52□□□□□ -1.05
NCL-203ENST00000417652 L3MBTL3Q96JM7 780 aaPredicted RBP8.52□□□□□ -1.05
NCL-203ENST00000417652 NEUROD6Q96NK8 337 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 TAF1DQ9H5J8 278 aaPredicted RBP8.52□□□□□ -1.05
NCL-203ENST00000417652 CD209Q9NNX6 404 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 COPRSQ9NQ92 184 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 GNL3LQ9NVN8 582 aaKnown RBP8.52□□□□□ -1.05
NCL-203ENST00000417652 GPRC5DQ9NZD1 345 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 AKAP2Q9Y2D5 859 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 COL4A1P02462 1669 aa8.52□□□□□ -1.05
NCL-203ENST00000417652 PNMA6EA0A0J9YXQ4 647 aa8.51□□□□□ -1.05
NCL-203ENST00000417652 VIL1P09327 827 aaKnown RBP8.51□□□□□ -1.05
NCL-203ENST00000417652 KLRK1P26718 216 aa8.51□□□□□ -1.05
NCL-203ENST00000417652 RRP1P56182 461 aaKnown RBP8.51□□□□□ -1.05
NCL-203ENST00000417652 CHAF1AQ13111 956 aaPredicted RBP8.51□□□□□ -1.05
NCL-203ENST00000417652 MTX1Q13505 466 aa8.51□□□□□ -1.05
NCL-203ENST00000417652 C20orf194Q5TEA3 1177 aa8.51□□□□□ -1.05
NCL-203ENST00000417652 RSBN1LQ6PCB5 846 aaPredicted RBP8.51□□□□□ -1.05
NCL-203ENST00000417652 C15orf52Q6ZUT6 534 aaKnown RBP8.51□□□□□ -1.05
NCL-203ENST00000417652 MICALL2Q8IY33 904 aa8.51□□□□□ -1.05
NCL-203ENST00000417652 LPIN2Q92539 896 aa8.51□□□□□ -1.05
NCL-203ENST00000417652 DPF2Q92785 391 aa8.51□□□□□ -1.05
NCL-203ENST00000417652 ADARB2Q9NS39 739 aaKnown RBP8.51□□□□□ -1.05
NCL-203ENST00000417652 HDAC9Q9UKV0 1011 aa8.51□□□□□ -1.05
NCL-203ENST00000417652 POTECB2RU33 542 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 APBB1O00213 710 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 USP17L8P0C7I0 530 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 BCAMP50895 628 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 SCNN1DP51172 638 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 TFCP2Q12800 502 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 FSTL1Q12841 308 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 HSP90AB4PQ58FF6 505 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 STRIP1Q5VSL9 837 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 CHADLQ6NUI6 762 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 USP50Q70EL3 339 aaPredicted RBP8.5□□□□□ -1.05
NCL-203ENST00000417652 ATG9AQ7Z3C6 839 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 LDHDQ86WU2 507 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 RPAP2Q8IXW5 612 aaPredicted RBP8.5□□□□□ -1.05
NCL-203ENST00000417652 AGBL3Q8NEM8 1001 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 FAM84BQ96KN1 310 aaPredicted RBP8.5□□□□□ -1.05
NCL-203ENST00000417652 IQSEC3Q9UPP2 1182 aaPredicted RBP8.5□□□□□ -1.05
NCL-203ENST00000417652 JAG2Q9Y219 1238 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 MYO3BQ8WXR4 1341 aa8.5□□□□□ -1.05
NCL-203ENST00000417652 COL4A5P29400 1685 aa8.49□□□□□ -1.05
NCL-203ENST00000417652 DUOX1Q9NRD9 1551 aa8.49□□□□□ -1.05
NCL-203ENST00000417652 F8W031 263 aaPredicted RBP8.49□□□□□ -1.05
NCL-203ENST00000417652 SASH1O94885 1247 aa8.49□□□□□ -1.05
NCL-203ENST00000417652 RBM5P52756 815 aaKnown RBP eCLIP8.49□□□□□ -1.05
NCL-203ENST00000417652 TIMM10P62072 90 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms