RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-208	ENST00000417285	ALDH1L1	O75891	902 aa		32.12	■■■□□ 2.73
VEGFA-208	ENST00000417285	BEGAIN	Q9BUH8	593 aa		32.12	■■■□□ 2.73
VEGFA-208	ENST00000417285	GRM8	O00222	908 aa		32.11	■■■□□ 2.73
VEGFA-208	ENST00000417285	MMP14	P50281	582 aa		32.11	■■■□□ 2.73
VEGFA-208	ENST00000417285	GRM1	Q13255	1194 aa		32.11	■■■□□ 2.73
VEGFA-208	ENST00000417285	SULF1	Q8IWU6	871 aa		32.11	■■■□□ 2.73
VEGFA-208	ENST00000417285	C9orf78	Q9NZ63	289 aa	Predicted RBP	32.11	■■■□□ 2.73
VEGFA-208	ENST00000417285	STRIP1	Q5VSL9	837 aa		32.1	■■■□□ 2.73
VEGFA-208	ENST00000417285	SCN9A	Q15858	1988 aa		32.1	■■■□□ 2.73
VEGFA-208	ENST00000417285	KCNJ4	P48050	445 aa		32.09	■■■□□ 2.73
VEGFA-208	ENST00000417285	CHRND	Q07001	517 aa		32.09	■■■□□ 2.73
VEGFA-208	ENST00000417285	SCARF1	Q14162	830 aa		32.09	■■■□□ 2.73
VEGFA-208	ENST00000417285	SRCIN1	Q9C0H9	1055 aa		32.09	■■■□□ 2.73
VEGFA-208	ENST00000417285	MYOZ2	Q9NPC6	264 aa		32.09	■■■□□ 2.73
VEGFA-208	ENST00000417285	MYO3B	Q8WXR4	1341 aa		32.08	■■■□□ 2.73
VEGFA-208	ENST00000417285		E9PSI1	815 aa		32.08	■■■□□ 2.73
VEGFA-208	ENST00000417285	C2orf69	Q8N8R5	385 aa		32.08	■■■□□ 2.73
VEGFA-208	ENST00000417285	DACT2	Q5SW24	774 aa		32.07	■■■□□ 2.72
VEGFA-208	ENST00000417285	SLC4A10	Q6U841	1118 aa		32.07	■■■□□ 2.72
VEGFA-208	ENST00000417285	LMBR1L	Q6UX01	489 aa		32.07	■■■□□ 2.72
VEGFA-208	ENST00000417285	TXNRD3	Q86VQ6	643 aa		32.07	■■■□□ 2.72
VEGFA-208	ENST00000417285	OGFOD1	Q8N543	542 aa		32.07	■■■□□ 2.72
VEGFA-208	ENST00000417285	GGA3	Q9NZ52	723 aa		32.07	■■■□□ 2.72
VEGFA-208	ENST00000417285	CHMP3	Q9Y3E7	222 aa		32.07	■■■□□ 2.72
VEGFA-208	ENST00000417285	CCER2	I3L3R5	266 aa		32.06	■■■□□ 2.72
VEGFA-208	ENST00000417285	LBX1	P52954	281 aa		32.06	■■■□□ 2.72
VEGFA-208	ENST00000417285	HUNK	P57058	714 aa		32.06	■■■□□ 2.72
VEGFA-208	ENST00000417285	CCDC57	Q2TAC2	916 aa		32.06	■■■□□ 2.72
VEGFA-208	ENST00000417285	TTLL5	Q6EMB2	1281 aa		32.05	■■■□□ 2.72
VEGFA-208	ENST00000417285	DLK2	Q6UY11	383 aa		32.05	■■■□□ 2.72
VEGFA-208	ENST00000417285	GBA2	Q9HCG7	927 aa	Predicted RBP	32.05	■■■□□ 2.72
VEGFA-208	ENST00000417285	ADM5	C9JUS6	153 aa		32.04	■■■□□ 2.72
VEGFA-208	ENST00000417285	AOC2	O75106	756 aa		32.04	■■■□□ 2.72
VEGFA-208	ENST00000417285	HSPA8	P11142	646 aa	Known RBP	32.03	■■■□□ 2.72
VEGFA-208	ENST00000417285	ANGEL2	Q5VTE6	544 aa	Known RBP	32.03	■■■□□ 2.72
VEGFA-208	ENST00000417285	C15orf52	Q6ZUT6	534 aa	Known RBP	32.03	■■■□□ 2.72
VEGFA-208	ENST00000417285	PITPNM2	Q9BZ72	1349 aa		32.02	■■■□□ 2.72
VEGFA-208	ENST00000417285	NOG	Q13253	232 aa		32.02	■■■□□ 2.72
VEGFA-208	ENST00000417285	TAF7L	Q5H9L4	462 aa		32.02	■■■□□ 2.72
VEGFA-208	ENST00000417285	EPHA10	Q5JZY3	1008 aa		32.02	■■■□□ 2.72
VEGFA-208	ENST00000417285	FBXW7	Q969H0	707 aa		32.02	■■■□□ 2.72
VEGFA-208	ENST00000417285	ASTN2	O75129	1339 aa	Predicted RBP	32.01	■■■□□ 2.72
VEGFA-208	ENST00000417285	CA12	O43570	354 aa		32.01	■■■□□ 2.71
VEGFA-208	ENST00000417285	LDHAL6A	Q6ZMR3	332 aa		32.01	■■■□□ 2.71
VEGFA-208	ENST00000417285	MRPL50	Q8N5N7	158 aa	Known RBP	32.01	■■■□□ 2.71
VEGFA-208	ENST00000417285	TAF5L	O75529	589 aa		32	■■■□□ 2.71
VEGFA-208	ENST00000417285	BRPF1	P55201	1214 aa	Predicted RBP	32	■■■□□ 2.71
VEGFA-208	ENST00000417285	SLFN5	Q08AF3	891 aa		32	■■■□□ 2.71
VEGFA-208	ENST00000417285	CCDC102A	Q96A19	550 aa		32	■■■□□ 2.71
VEGFA-208	ENST00000417285	CD209	Q9NNX6	404 aa		32	■■■□□ 2.71
VEGFA-208	ENST00000417285	PTPRC	P08575	1304 aa		32	■■■□□ 2.71
VEGFA-208	ENST00000417285	KLRK1	P26718	216 aa		31.99	■■■□□ 2.71
VEGFA-208	ENST00000417285	RGMB	Q6NW40	437 aa		31.99	■■■□□ 2.71
VEGFA-208	ENST00000417285	HELB	Q8NG08	1087 aa	Predicted RBP	31.99	■■■□□ 2.71
VEGFA-208	ENST00000417285	CDCA5	Q96FF9	252 aa		31.99	■■■□□ 2.71
VEGFA-208	ENST00000417285	MXD3	Q9BW11	206 aa		31.99	■■■□□ 2.71
VEGFA-208	ENST00000417285	HDAC9	Q9UKV0	1011 aa		31.98	■■■□□ 2.71
VEGFA-208	ENST00000417285	POLR2A	P24928	1970 aa	Known RBP	31.98	■■■□□ 2.71
VEGFA-208	ENST00000417285	GTF2I	P78347	998 aa		31.97	■■■□□ 2.71
VEGFA-208	ENST00000417285	CNNM1	Q9NRU3	951 aa		31.97	■■■□□ 2.71
VEGFA-208	ENST00000417285	PSME4	Q14997	1843 aa		31.97	■■■□□ 2.71
VEGFA-208	ENST00000417285	UTY	O14607	1347 aa		31.97	■■■□□ 2.71
VEGFA-208	ENST00000417285	SPEF2	Q9C093	1822 aa		31.96	■■■□□ 2.71
VEGFA-208	ENST00000417285	CAPN15	O75808	1086 aa		31.96	■■■□□ 2.71
VEGFA-208	ENST00000417285	FKBP1B	P68106	108 aa		31.96	■■■□□ 2.71
VEGFA-208	ENST00000417285	ZNF804A	Q7Z570	1209 aa		31.96	■■■□□ 2.71
VEGFA-208	ENST00000417285	THSD7B	Q9C0I4	1608 aa		31.96	■■■□□ 2.71
VEGFA-208	ENST00000417285	NBPF9	Q3BBW0	867 aa		31.95	■■■□□ 2.71
VEGFA-208	ENST00000417285	ZNF594	Q96JF6	807 aa	Predicted RBP	31.95	■■■□□ 2.71
VEGFA-208	ENST00000417285	IRS2	Q9Y4H2	1338 aa		31.95	■■■□□ 2.7
VEGFA-208	ENST00000417285	NBPF7	P0C2Y1	421 aa	Predicted RBP	31.94	■■■□□ 2.7
VEGFA-208	ENST00000417285	ZNF157	P51786	506 aa	Predicted RBP	31.94	■■■□□ 2.7
VEGFA-208	ENST00000417285	SSH1	Q8WYL5	1049 aa		31.94	■■■□□ 2.7
VEGFA-208	ENST00000417285	SNAP23	O00161	211 aa		31.93	■■■□□ 2.7
VEGFA-208	ENST00000417285	WNT10B	O00744	389 aa		31.93	■■■□□ 2.7
VEGFA-208	ENST00000417285	IL1R1	P14778	569 aa		31.93	■■■□□ 2.7
VEGFA-208	ENST00000417285	ALDH1L2	Q3SY69	923 aa		31.93	■■■□□ 2.7
VEGFA-208	ENST00000417285	SUCLG2	Q96I99	432 aa		31.93	■■■□□ 2.7
VEGFA-208	ENST00000417285	PLIN1	O60240	522 aa		31.92	■■■□□ 2.7
VEGFA-208	ENST00000417285	KAZALD1	Q96I82	304 aa		31.92	■■■□□ 2.7
VEGFA-208	ENST00000417285	KIAA0825	Q8IV33	1275 aa		31.91	■■■□□ 2.7
VEGFA-208	ENST00000417285	FAM155A	B1AL88	458 aa	Predicted RBP	31.9	■■■□□ 2.7
VEGFA-208	ENST00000417285	UBE4A	Q14139	1066 aa		31.9	■■■□□ 2.7
VEGFA-208	ENST00000417285	CDCA7L	Q96GN5	454 aa		31.9	■■■□□ 2.7
VEGFA-208	ENST00000417285	FKBP1A	P62942	108 aa	Known RBP	31.89	■■■□□ 2.7
VEGFA-208	ENST00000417285	TRMT2A	Q8IZ69	625 aa	Known RBP	31.89	■■■□□ 2.7
VEGFA-208	ENST00000417285	CT47B1	P0C2W7	299 aa	Predicted RBP	31.88	■■■□□ 2.69
VEGFA-208	ENST00000417285	RABL6	Q3YEC7	729 aa	Predicted RBP	31.88	■■■□□ 2.69
VEGFA-208	ENST00000417285	SASH1	O94885	1247 aa		31.87	■■■□□ 2.69
VEGFA-208	ENST00000417285	ZBED3	Q96IU2	234 aa	Predicted RBP	31.87	■■■□□ 2.69
VEGFA-208	ENST00000417285	ZIC5	Q96T25	663 aa		31.87	■■■□□ 2.69
VEGFA-208	ENST00000417285	BICC1	Q9H694	974 aa	Known RBP	31.87	■■■□□ 2.69
VEGFA-208	ENST00000417285	MROH5	Q6ZUA9	1318 aa		31.86	■■■□□ 2.69
VEGFA-208	ENST00000417285	NF2	P35240	595 aa		31.86	■■■□□ 2.69
VEGFA-208	ENST00000417285	REM2	Q8IYK8	340 aa	Predicted RBP	31.86	■■■□□ 2.69
VEGFA-208	ENST00000417285	RIPOR2	Q9Y4F9	1068 aa		31.86	■■■□□ 2.69
VEGFA-208	ENST00000417285	KIF23	Q02241	960 aa	Predicted RBP	31.85	■■■□□ 2.69
VEGFA-208	ENST00000417285	DLGAP5	Q15398	846 aa		31.85	■■■□□ 2.69
VEGFA-208	ENST00000417285	APOBEC3F	Q8IUX4	373 aa	Known RBP	31.85	■■■□□ 2.69
VEGFA-208	ENST00000417285	MTMR14	Q8NCE2	650 aa		31.85	■■■□□ 2.69

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