RNA–Protein interactions for RNA: ENST00000417036.1

THUMPD3-203, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-203ENST00000417036 MYD88Q99836 296 aa17.46■□□□□ 0.39
THUMPD3-203ENST00000417036 ISCA1Q9BUE6 129 aa17.46■□□□□ 0.39
THUMPD3-203ENST00000417036 RTL5Q5HYW3 569 aaPredicted RBP17.45■□□□□ 0.38
THUMPD3-203ENST00000417036 DZIP1LQ8IYY4 767 aaKnown RBP17.45■□□□□ 0.38
THUMPD3-203ENST00000417036 CCDC102AQ96A19 550 aa17.45■□□□□ 0.38
THUMPD3-203ENST00000417036 KCNQ5Q9NR82 932 aa17.45■□□□□ 0.38
THUMPD3-203ENST00000417036 ZNF157P51786 506 aaPredicted RBP17.44■□□□□ 0.38
THUMPD3-203ENST00000417036 KIF23Q02241 960 aaPredicted RBP17.44■□□□□ 0.38
THUMPD3-203ENST00000417036 KIF4BQ2VIQ3 1234 aa17.44■□□□□ 0.38
THUMPD3-203ENST00000417036 METTL22Q9BUU2 404 aaPredicted RBP17.44■□□□□ 0.38
THUMPD3-203ENST00000417036 SAGE1Q9NXZ1 904 aa17.44■□□□□ 0.38
THUMPD3-203ENST00000417036 IRS4O14654 1257 aaPredicted RBP17.43■□□□□ 0.38
THUMPD3-203ENST00000417036 CWF19L2Q2TBE0 894 aaKnown RBP17.43■□□□□ 0.38
THUMPD3-203ENST00000417036 SULF1Q8IWU6 871 aa17.43■□□□□ 0.38
THUMPD3-203ENST00000417036 TMEM57Q8N5G2 664 aa17.43■□□□□ 0.38
THUMPD3-203ENST00000417036 TBC1D16Q8TBP0 767 aa17.43■□□□□ 0.38
THUMPD3-203ENST00000417036 GGA3Q9NZ52 723 aa17.43■□□□□ 0.38
THUMPD3-203ENST00000417036 IGKV5-2P06315 115 aa17.42■□□□□ 0.38
THUMPD3-203ENST00000417036 RPS8P62241 208 aaKnown RBP17.42■□□□□ 0.38
THUMPD3-203ENST00000417036 IRX6P78412 446 aaPredicted RBP17.42■□□□□ 0.38
THUMPD3-203ENST00000417036 NEXNQ0ZGT2 675 aa17.42■□□□□ 0.38
THUMPD3-203ENST00000417036 BEND3Q5T5X7 828 aa17.42■□□□□ 0.38
THUMPD3-203ENST00000417036 ZC3H12CQ9C0D7 883 aaKnown RBP17.42■□□□□ 0.38
THUMPD3-203ENST00000417036 MYH3P11055 1940 aa17.42■□□□□ 0.38
THUMPD3-203ENST00000417036 SPEF2Q9C093 1822 aa17.42■□□□□ 0.38
THUMPD3-203ENST00000417036 G3V3G9 751 aa17.41■□□□□ 0.38
THUMPD3-203ENST00000417036 TRPA1O75762 1119 aa17.41■□□□□ 0.38
THUMPD3-203ENST00000417036 SLC10A3P09131 477 aa17.41■□□□□ 0.38
THUMPD3-203ENST00000417036 VIL1P09327 827 aaKnown RBP17.41■□□□□ 0.38
THUMPD3-203ENST00000417036 DCAF8Q5TAQ9 597 aa17.41■□□□□ 0.38
THUMPD3-203ENST00000417036 ITPRIPQ8IWB1 547 aa17.41■□□□□ 0.38
THUMPD3-203ENST00000417036 SRCIN1Q9C0H9 1055 aa17.41■□□□□ 0.38
THUMPD3-203ENST00000417036 RNF186Q9NXI6 227 aa17.41■□□□□ 0.38
THUMPD3-203ENST00000417036 ASTN2O75129 1339 aaPredicted RBP17.41■□□□□ 0.38
THUMPD3-203ENST00000417036 PAPPA2Q9BXP8 1791 aa17.4■□□□□ 0.38
THUMPD3-203ENST00000417036 NEURL1BA8MQ27 555 aa17.4■□□□□ 0.38
THUMPD3-203ENST00000417036 UFL1O94874 794 aa17.4■□□□□ 0.38
THUMPD3-203ENST00000417036 TRIM28Q13263 835 aaKnown RBP17.4■□□□□ 0.38
THUMPD3-203ENST00000417036 LINS1Q8NG48 757 aa17.4■□□□□ 0.38
THUMPD3-203ENST00000417036 CDCA5Q96FF9 252 aa17.4■□□□□ 0.38
THUMPD3-203ENST00000417036 MS4A1P11836 297 aa17.39■□□□□ 0.37
THUMPD3-203ENST00000417036 CCT4P50991 539 aaKnown RBP17.39■□□□□ 0.37
THUMPD3-203ENST00000417036 PDE3AQ14432 1141 aa17.39■□□□□ 0.37
THUMPD3-203ENST00000417036 INTS3Q68E01 1043 aaKnown RBP17.39■□□□□ 0.37
THUMPD3-203ENST00000417036 PODXL2Q9NZ53 605 aa17.39■□□□□ 0.37
THUMPD3-203ENST00000417036 ANKIB1Q9P2G1 1089 aa17.39■□□□□ 0.37
THUMPD3-203ENST00000417036 GGA1Q9UJY5 639 aa17.39■□□□□ 0.37
THUMPD3-203ENST00000417036 COG6Q9Y2V7 657 aa17.39■□□□□ 0.37
THUMPD3-203ENST00000417036 ZNF609O15014 1411 aa17.38■□□□□ 0.37
THUMPD3-203ENST00000417036 SOX10P56693 466 aa17.38■□□□□ 0.37
THUMPD3-203ENST00000417036 CSRNP1Q96S65 589 aa17.38■□□□□ 0.37
THUMPD3-203ENST00000417036 SEC31BQ9NQW1 1179 aa17.38■□□□□ 0.37
THUMPD3-203ENST00000417036 ALDH1L1O75891 902 aa17.37■□□□□ 0.37
THUMPD3-203ENST00000417036 HSP90B1P14625 803 aaKnown RBP17.37■□□□□ 0.37
THUMPD3-203ENST00000417036 MVPQ14764 893 aaKnown RBP17.37■□□□□ 0.37
THUMPD3-203ENST00000417036 ANGEL2Q5VTE6 544 aaKnown RBP17.37■□□□□ 0.37
THUMPD3-203ENST00000417036 RSBN1LQ6PCB5 846 aaPredicted RBP17.37■□□□□ 0.37
THUMPD3-203ENST00000417036 ZBTB38Q8NAP3 1195 aaPredicted RBP17.37■□□□□ 0.37
THUMPD3-203ENST00000417036 CRBNQ96SW2 442 aa17.37■□□□□ 0.37
THUMPD3-203ENST00000417036 CWC25Q9NXE8 425 aaPredicted RBP17.37■□□□□ 0.37
THUMPD3-203ENST00000417036 ZNF280AP59817 542 aaPredicted RBP17.36■□□□□ 0.37
THUMPD3-203ENST00000417036 SCARF1Q14162 830 aa17.36■□□□□ 0.37
THUMPD3-203ENST00000417036 GCKRQ14397 625 aa17.36■□□□□ 0.37
THUMPD3-203ENST00000417036 RASAL3Q86YV0 1011 aa17.36■□□□□ 0.37
THUMPD3-203ENST00000417036 AGBL3Q8NEM8 1001 aa17.36■□□□□ 0.37
THUMPD3-203ENST00000417036 ZNF646O15015 1829 aaPredicted RBP17.35■□□□□ 0.37
THUMPD3-203ENST00000417036 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
THUMPD3-203ENST00000417036 CTU1Q7Z7A3 348 aaKnown RBP17.35■□□□□ 0.37
THUMPD3-203ENST00000417036 REM2Q8IYK8 340 aaPredicted RBP17.35■□□□□ 0.37
THUMPD3-203ENST00000417036 CCDC191Q8NCU4 936 aa17.35■□□□□ 0.37
THUMPD3-203ENST00000417036 MEIS3Q99687 375 aa17.35■□□□□ 0.37
THUMPD3-203ENST00000417036 FKBP1BP68106 108 aa17.34■□□□□ 0.37
THUMPD3-203ENST00000417036 JARID2Q92833 1246 aaPredicted RBP17.34■□□□□ 0.37
THUMPD3-203ENST00000417036 CCDC85AQ96PX6 553 aaPredicted RBP17.34■□□□□ 0.37
THUMPD3-203ENST00000417036 XDHP47989 1333 aa17.33■□□□□ 0.36
THUMPD3-203ENST00000417036 PITPNM2Q9BZ72 1349 aa17.33■□□□□ 0.36
THUMPD3-203ENST00000417036 GRM8O00222 908 aa17.33■□□□□ 0.36
THUMPD3-203ENST00000417036 PDE8AO60658 829 aa17.33■□□□□ 0.36
THUMPD3-203ENST00000417036 USP17L8P0C7I0 530 aa17.33■□□□□ 0.36
THUMPD3-203ENST00000417036 UBE3BQ7Z3V4 1068 aa17.33■□□□□ 0.36
THUMPD3-203ENST00000417036 MYOZ2Q9NPC6 264 aa17.33■□□□□ 0.36
THUMPD3-203ENST00000417036 PCDH10Q9P2E7 1040 aa17.33■□□□□ 0.36
THUMPD3-203ENST00000417036 DDX19BQ9UMR2 479 aa17.33■□□□□ 0.36
THUMPD3-203ENST00000417036 PCCAP05165 728 aaPredicted RBP17.32■□□□□ 0.36
THUMPD3-203ENST00000417036 ANKRD18AQ8IVF6 992 aa17.32■□□□□ 0.36
THUMPD3-203ENST00000417036 GMLQ99445 158 aa17.32■□□□□ 0.36
THUMPD3-203ENST00000417036 C9orf78Q9NZ63 289 aaPredicted RBP17.32■□□□□ 0.36
THUMPD3-203ENST00000417036 USP17L3A6NCW0 530 aa17.31■□□□□ 0.36
THUMPD3-203ENST00000417036 USP17L4A6NCW7 530 aa17.31■□□□□ 0.36
THUMPD3-203ENST00000417036 NEFLP07196 543 aa17.31■□□□□ 0.36
THUMPD3-203ENST00000417036 NBPF7P0C2Y1 421 aaPredicted RBP17.31■□□□□ 0.36
THUMPD3-203ENST00000417036 USP17L1Q7RTZ2 530 aa17.31■□□□□ 0.36
THUMPD3-203ENST00000417036 EXOC6Q8TAG9 804 aa17.31■□□□□ 0.36
THUMPD3-203ENST00000417036 USP44Q9H0E7 712 aa17.31■□□□□ 0.36
THUMPD3-203ENST00000417036 C1orf115Q9H7X2 142 aa17.31■□□□□ 0.36
THUMPD3-203ENST00000417036 SCAF8Q9UPN6 1271 aaKnown RBP17.31■□□□□ 0.36
THUMPD3-203ENST00000417036 UBTFL1P0CB47 393 aaPredicted RBP17.3■□□□□ 0.36
THUMPD3-203ENST00000417036 ATP2B4P23634 1241 aa17.3■□□□□ 0.36
THUMPD3-203ENST00000417036 CASP7P55210 303 aa17.3■□□□□ 0.36
THUMPD3-203ENST00000417036 MOB2Q70IA6 237 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms