RNA–Protein interactions for RNA: ENST00000416880.5

SEC22C-204, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-204ENST00000416880 MYO3BQ8WXR4 1341 aa17.35■□□□□ 0.37
SEC22C-204ENST00000416880 PSME4Q14997 1843 aa17.35■□□□□ 0.37
SEC22C-204ENST00000416880 EGFRP00533 1210 aa17.34■□□□□ 0.37
SEC22C-204ENST00000416880 STRIP1Q5VSL9 837 aa17.34■□□□□ 0.37
SEC22C-204ENST00000416880 PAXIP1Q6ZW49 1069 aaPredicted RBP17.34■□□□□ 0.37
SEC22C-204ENST00000416880 SRCIN1Q9C0H9 1055 aa17.34■□□□□ 0.37
SEC22C-204ENST00000416880 C9orf78Q9NZ63 289 aaPredicted RBP17.34■□□□□ 0.37
SEC22C-204ENST00000416880 CYP4F22Q6NT55 531 aa17.33■□□□□ 0.36
SEC22C-204ENST00000416880 C15orf52Q6ZUT6 534 aaKnown RBP17.33■□□□□ 0.36
SEC22C-204ENST00000416880 SULF1Q8IWU6 871 aa17.33■□□□□ 0.36
SEC22C-204ENST00000416880 OGFOD1Q8N543 542 aa17.33■□□□□ 0.36
SEC22C-204ENST00000416880 BEGAINQ9BUH8 593 aa17.33■□□□□ 0.36
SEC22C-204ENST00000416880 POLR2AP24928 1970 aaKnown RBP17.33■□□□□ 0.36
SEC22C-204ENST00000416880 WTIPA6NIX2 430 aaPredicted RBP17.32■□□□□ 0.36
SEC22C-204ENST00000416880 KCNJ4P48050 445 aa17.32■□□□□ 0.36
SEC22C-204ENST00000416880 CHRNDQ07001 517 aa17.32■□□□□ 0.36
SEC22C-204ENST00000416880 CCDC57Q2TAC2 916 aa17.32■□□□□ 0.36
SEC22C-204ENST00000416880 LMBR1LQ6UX01 489 aa17.32■□□□□ 0.36
SEC22C-204ENST00000416880 C2orf69Q8N8R5 385 aa17.32■□□□□ 0.36
SEC22C-204ENST00000416880 ZNF408Q9H9D4 720 aa17.32■□□□□ 0.36
SEC22C-204ENST00000416880 MYOZ2Q9NPC6 264 aa17.32■□□□□ 0.36
SEC22C-204ENST00000416880 SPEF2Q9C093 1822 aa17.31■□□□□ 0.36
SEC22C-204ENST00000416880 PTPRCP08575 1304 aa17.31■□□□□ 0.36
SEC22C-204ENST00000416880 PITPNM2Q9BZ72 1349 aa17.31■□□□□ 0.36
SEC22C-204ENST00000416880 SCARF1Q14162 830 aa17.31■□□□□ 0.36
SEC22C-204ENST00000416880 DACT2Q5SW24 774 aa17.31■□□□□ 0.36
SEC22C-204ENST00000416880 SLC4A10Q6U841 1118 aa17.31■□□□□ 0.36
SEC22C-204ENST00000416880 CA12O43570 354 aa17.3■□□□□ 0.36
SEC22C-204ENST00000416880 SLFN5Q08AF3 891 aa17.3■□□□□ 0.36
SEC22C-204ENST00000416880 TTLL5Q6EMB2 1281 aa17.3■□□□□ 0.36
SEC22C-204ENST00000416880 TXNRD3Q86VQ6 643 aa17.3■□□□□ 0.36
SEC22C-204ENST00000416880 MRPL50Q8N5N7 158 aaKnown RBP17.3■□□□□ 0.36
SEC22C-204ENST00000416880 GBA2Q9HCG7 927 aaPredicted RBP17.3■□□□□ 0.36
SEC22C-204ENST00000416880 GGA3Q9NZ52 723 aa17.3■□□□□ 0.36
SEC22C-204ENST00000416880 CHMP3Q9Y3E7 222 aa17.3■□□□□ 0.36
SEC22C-204ENST00000416880 THSD7BQ9C0I4 1608 aa17.29■□□□□ 0.36
SEC22C-204ENST00000416880 UTYO14607 1347 aa17.29■□□□□ 0.36
SEC22C-204ENST00000416880 CCER2I3L3R5 266 aa17.29■□□□□ 0.36
SEC22C-204ENST00000416880 HUNKP57058 714 aa17.29■□□□□ 0.36
SEC22C-204ENST00000416880 NOGQ13253 232 aa17.29■□□□□ 0.36
SEC22C-204ENST00000416880 GRM1Q13255 1194 aa17.29■□□□□ 0.36
SEC22C-204ENST00000416880 TAF7LQ5H9L4 462 aa17.29■□□□□ 0.36
SEC22C-204ENST00000416880 LDHAL6AQ6ZMR3 332 aa17.29■□□□□ 0.36
SEC22C-204ENST00000416880 CCDC102AQ96A19 550 aa17.29■□□□□ 0.36
SEC22C-204ENST00000416880 LBX1P52954 281 aa17.28■□□□□ 0.36
SEC22C-204ENST00000416880 BRPF1P55201 1214 aaPredicted RBP17.28■□□□□ 0.36
SEC22C-204ENST00000416880 FKBP1BP68106 108 aa17.28■□□□□ 0.36
SEC22C-204ENST00000416880 ALDH1L2Q3SY69 923 aa17.28■□□□□ 0.36
SEC22C-204ENST00000416880 EPHA10Q5JZY3 1008 aa17.28■□□□□ 0.36
SEC22C-204ENST00000416880 ANGEL2Q5VTE6 544 aaKnown RBP17.28■□□□□ 0.36
SEC22C-204ENST00000416880 CD209Q9NNX6 404 aa17.28■□□□□ 0.36
SEC22C-204ENST00000416880 HDAC9Q9UKV0 1011 aa17.28■□□□□ 0.36
SEC22C-204ENST00000416880 ADM5C9JUS6 153 aa17.27■□□□□ 0.36
SEC22C-204ENST00000416880 CT47B1P0C2W7 299 aaPredicted RBP17.27■□□□□ 0.36
SEC22C-204ENST00000416880 HSPA8P11142 646 aaKnown RBP17.27■□□□□ 0.36
SEC22C-204ENST00000416880 RGMBQ6NW40 437 aa17.27■□□□□ 0.36
SEC22C-204ENST00000416880 AOC2O75106 756 aa17.26■□□□□ 0.35
SEC22C-204ENST00000416880 TAF5LO75529 589 aa17.26■□□□□ 0.35
SEC22C-204ENST00000416880 ZNF804AQ7Z570 1209 aa17.26■□□□□ 0.35
SEC22C-204ENST00000416880 FBXW7Q969H0 707 aa17.26■□□□□ 0.35
SEC22C-204ENST00000416880 CDCA5Q96FF9 252 aa17.26■□□□□ 0.35
SEC22C-204ENST00000416880 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
SEC22C-204ENST00000416880 IRS2Q9Y4H2 1338 aa17.25■□□□□ 0.35
SEC22C-204ENST00000416880 IL1R1P14778 569 aa17.25■□□□□ 0.35
SEC22C-204ENST00000416880 FKBP1AP62942 108 aaKnown RBP17.25■□□□□ 0.35
SEC22C-204ENST00000416880 GTF2IP78347 998 aa17.25■□□□□ 0.35
SEC22C-204ENST00000416880 UBE4AQ14139 1066 aa17.25■□□□□ 0.35
SEC22C-204ENST00000416880 DLK2Q6UY11 383 aa17.25■□□□□ 0.35
SEC22C-204ENST00000416880 TRMT2AQ8IZ69 625 aaKnown RBP17.25■□□□□ 0.35
SEC22C-204ENST00000416880 HELBQ8NG08 1087 aaPredicted RBP17.25■□□□□ 0.35
SEC22C-204ENST00000416880 SSH1Q8WYL5 1049 aa17.25■□□□□ 0.35
SEC22C-204ENST00000416880 ASTN2O75129 1339 aaPredicted RBP17.24■□□□□ 0.35
SEC22C-204ENST00000416880 WNT10BO00744 389 aa17.24■□□□□ 0.35
SEC22C-204ENST00000416880 NBPF7P0C2Y1 421 aaPredicted RBP17.24■□□□□ 0.35
SEC22C-204ENST00000416880 KLRK1P26718 216 aa17.24■□□□□ 0.35
SEC22C-204ENST00000416880 RABL6Q3YEC7 729 aaPredicted RBP17.24■□□□□ 0.35
SEC22C-204ENST00000416880 KAZALD1Q96I82 304 aa17.24■□□□□ 0.35
SEC22C-204ENST00000416880 SUCLG2Q96I99 432 aa17.24■□□□□ 0.35
SEC22C-204ENST00000416880 ZNF594Q96JF6 807 aaPredicted RBP17.24■□□□□ 0.35
SEC22C-204ENST00000416880 ZNF157P51786 506 aaPredicted RBP17.23■□□□□ 0.35
SEC22C-204ENST00000416880 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
SEC22C-204ENST00000416880 REM2Q8IYK8 340 aaPredicted RBP17.23■□□□□ 0.35
SEC22C-204ENST00000416880 MXD3Q9BW11 206 aa17.23■□□□□ 0.35
SEC22C-204ENST00000416880 MROH5Q6ZUA9 1318 aa17.22■□□□□ 0.35
SEC22C-204ENST00000416880 SASH1O94885 1247 aa17.22■□□□□ 0.35
SEC22C-204ENST00000416880 KIAA0825Q8IV33 1275 aa17.22■□□□□ 0.35
SEC22C-204ENST00000416880 MTMR14Q8NCE2 650 aa17.22■□□□□ 0.35
SEC22C-204ENST00000416880 ZNF646O15015 1829 aaPredicted RBP17.21■□□□□ 0.35
SEC22C-204ENST00000416880 FAM155AB1AL88 458 aaPredicted RBP17.21■□□□□ 0.35
SEC22C-204ENST00000416880 SNAP23O00161 211 aa17.21■□□□□ 0.35
SEC22C-204ENST00000416880 PLIN1O60240 522 aa17.21■□□□□ 0.35
SEC22C-204ENST00000416880 NF2P35240 595 aa17.21■□□□□ 0.35
SEC22C-204ENST00000416880 APOBEC3FQ8IUX4 373 aaKnown RBP17.21■□□□□ 0.35
SEC22C-204ENST00000416880 ZBED3Q96IU2 234 aaPredicted RBP17.21■□□□□ 0.35
SEC22C-204ENST00000416880 USP44Q9H0E7 712 aa17.21■□□□□ 0.35
SEC22C-204ENST00000416880 RIPOR2Q9Y4F9 1068 aa17.21■□□□□ 0.35
SEC22C-204ENST00000416880 DLGAP5Q15398 846 aa17.2■□□□□ 0.34
SEC22C-204ENST00000416880 CDCA7LQ96GN5 454 aa17.2■□□□□ 0.34
SEC22C-204ENST00000416880 BICC1Q9H694 974 aaKnown RBP17.2■□□□□ 0.34
SEC22C-204ENST00000416880 FAM205AQ6ZU69 1335 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms