RNA–Protein interactions for RNA: ENST00000416754.1

RUNX1-206, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-206ENST00000416754 TRIM17Q9Y577 477 aa11.62□□□□□ -0.55
RUNX1-206ENST00000416754 ERBB4Q15303 1308 aa11.61□□□□□ -0.55
RUNX1-206ENST00000416754 ATP5J2-PTCD1G3V325 749 aa11.61□□□□□ -0.55
RUNX1-206ENST00000416754 SF3B3Q15393 1217 aaKnown RBP11.61□□□□□ -0.55
RUNX1-206ENST00000416754 NOM1Q5C9Z4 860 aaKnown RBP11.61□□□□□ -0.55
RUNX1-206ENST00000416754 OTOP1Q7RTM1 612 aa11.61□□□□□ -0.55
RUNX1-206ENST00000416754 EYA3Q99504 573 aa11.61□□□□□ -0.55
RUNX1-206ENST00000416754 SEC31BQ9NQW1 1179 aa11.61□□□□□ -0.55
RUNX1-206ENST00000416754 KDM3BQ7LBC6 1761 aa11.6□□□□□ -0.55
RUNX1-206ENST00000416754 G3V3G9 751 aa11.6□□□□□ -0.55
RUNX1-206ENST00000416754 UFL1O94874 794 aa11.6□□□□□ -0.55
RUNX1-206ENST00000416754 USP17L8P0C7I0 530 aa11.6□□□□□ -0.55
RUNX1-206ENST00000416754 RPS8P62241 208 aaKnown RBP11.6□□□□□ -0.55
RUNX1-206ENST00000416754 TRIM26Q12899 539 aaPredicted RBP11.6□□□□□ -0.55
RUNX1-206ENST00000416754 KRT24Q2M2I5 525 aa11.6□□□□□ -0.55
RUNX1-206ENST00000416754 DCAF8Q5TAQ9 597 aa11.6□□□□□ -0.55
RUNX1-206ENST00000416754 TSPYL4Q9UJ04 414 aa11.6□□□□□ -0.55
RUNX1-206ENST00000416754 CUL9Q8IWT3 2517 aa11.6□□□□□ -0.55
RUNX1-206ENST00000416754 ANKRD36CQ5JPF3 1778 aa11.59□□□□□ -0.55
RUNX1-206ENST00000416754 PAPPA2Q9BXP8 1791 aa11.59□□□□□ -0.55
RUNX1-206ENST00000416754 NFE2L2Q16236 605 aa11.59□□□□□ -0.55
RUNX1-206ENST00000416754 HSP90AB3PQ58FF7 597 aa11.59□□□□□ -0.55
RUNX1-206ENST00000416754 AGBL3Q8NEM8 1001 aa11.59□□□□□ -0.55
RUNX1-206ENST00000416754 PLEKHF1Q96S99 279 aa11.59□□□□□ -0.55
RUNX1-206ENST00000416754 LRRC37AA6NMS7 1700 aa11.58□□□□□ -0.56
RUNX1-206ENST00000416754 SPRYD7Q5W111 196 aa11.58□□□□□ -0.56
RUNX1-206ENST00000416754 CD99L2Q8TCZ2 262 aa11.58□□□□□ -0.56
RUNX1-206ENST00000416754 JARID2Q92833 1246 aaPredicted RBP11.58□□□□□ -0.56
RUNX1-206ENST00000416754 ISCA1Q9BUE6 129 aa11.58□□□□□ -0.56
RUNX1-206ENST00000416754 CFHR5Q9BXR6 569 aa11.58□□□□□ -0.56
RUNX1-206ENST00000416754 BMP2KQ9NSY1 1161 aaPredicted RBP11.58□□□□□ -0.56
RUNX1-206ENST00000416754 ANKIB1Q9P2G1 1089 aa11.58□□□□□ -0.56
RUNX1-206ENST00000416754 PTPN22Q9Y2R2 807 aa11.58□□□□□ -0.56
RUNX1-206ENST00000416754 SZT2Q5T011 3432 aa11.58□□□□□ -0.56
RUNX1-206ENST00000416754 A0A0C4DFX4 3053 aa11.57□□□□□ -0.56
RUNX1-206ENST00000416754 H0YGN5 161 aa11.57□□□□□ -0.56
RUNX1-206ENST00000416754 IGF2BP3O00425 579 aaKnown RBP eCLIP11.57□□□□□ -0.56
RUNX1-206ENST00000416754 IRS4O14654 1257 aaPredicted RBP11.57□□□□□ -0.56
RUNX1-206ENST00000416754 SREBF2Q12772 1141 aa11.57□□□□□ -0.56
RUNX1-206ENST00000416754 LDLRAD1Q5T700 205 aa11.57□□□□□ -0.56
RUNX1-206ENST00000416754 CLMNQ96JQ2 1002 aa11.57□□□□□ -0.56
RUNX1-206ENST00000416754 CCDC85AQ96PX6 553 aaPredicted RBP11.57□□□□□ -0.56
RUNX1-206ENST00000416754 PODXL2Q9NZ53 605 aa11.57□□□□□ -0.56
RUNX1-206ENST00000416754 GGA1Q9UJY5 639 aa11.57□□□□□ -0.56
RUNX1-206ENST00000416754 PITPNM2Q9BZ72 1349 aa11.57□□□□□ -0.56
RUNX1-206ENST00000416754 CLSPNQ9HAW4 1339 aa11.57□□□□□ -0.56
RUNX1-206ENST00000416754 CENPFP49454 3210 aa11.56□□□□□ -0.56
RUNX1-206ENST00000416754 USP17L3A6NCW0 530 aa11.56□□□□□ -0.56
RUNX1-206ENST00000416754 USP17L4A6NCW7 530 aa11.56□□□□□ -0.56
RUNX1-206ENST00000416754 DLL1O00548 723 aa11.56□□□□□ -0.56
RUNX1-206ENST00000416754 WNT10BO00744 389 aa11.56□□□□□ -0.56
RUNX1-206ENST00000416754 SASH1O94885 1247 aa11.56□□□□□ -0.56
RUNX1-206ENST00000416754 MYCP01106 439 aaPredicted RBP11.56□□□□□ -0.56
RUNX1-206ENST00000416754 INTS3Q68E01 1043 aaKnown RBP11.56□□□□□ -0.56
RUNX1-206ENST00000416754 USP17L1Q7RTZ2 530 aa11.56□□□□□ -0.56
RUNX1-206ENST00000416754 IFNL1Q8IU54 200 aa11.56□□□□□ -0.56
RUNX1-206ENST00000416754 ANGEL1Q9UNK9 670 aaKnown RBP11.56□□□□□ -0.56
RUNX1-206ENST00000416754 ARMC5Q96C12 935 aa11.55□□□□□ -0.56
RUNX1-206ENST00000416754 CHPF2Q9P2E5 772 aa11.55□□□□□ -0.56
RUNX1-206ENST00000416754 DLG5Q8TDM6 1919 aa11.54□□□□□ -0.56
RUNX1-206ENST00000416754 ANKRD13DQ6ZTN6 518 aa11.54□□□□□ -0.56
RUNX1-206ENST00000416754 ARMC9Q7Z3E5 817 aa11.54□□□□□ -0.56
RUNX1-206ENST00000416754 PLBD2Q8NHP8 589 aa11.54□□□□□ -0.56
RUNX1-206ENST00000416754 FBXW7Q969H0 707 aa11.54□□□□□ -0.56
RUNX1-206ENST00000416754 SLC10A4Q96EP9 437 aa11.54□□□□□ -0.56
RUNX1-206ENST00000416754 METRNQ9UJH8 293 aa11.54□□□□□ -0.56
RUNX1-206ENST00000416754 DDX60Q8IY21 1712 aaKnown RBP11.54□□□□□ -0.56
RUNX1-206ENST00000416754 NEFMP07197 916 aa11.53□□□□□ -0.56
RUNX1-206ENST00000416754 NF2P35240 595 aa11.53□□□□□ -0.56
RUNX1-206ENST00000416754 GJA5P36382 358 aa11.53□□□□□ -0.56
RUNX1-206ENST00000416754 CRHR2Q13324 411 aa11.53□□□□□ -0.56
RUNX1-206ENST00000416754 DACT2Q5SW24 774 aa11.53□□□□□ -0.56
RUNX1-206ENST00000416754 EFCC1Q9HA90 598 aa11.53□□□□□ -0.56
RUNX1-206ENST00000416754 ZNF609O15014 1411 aa11.52□□□□□ -0.56
RUNX1-206ENST00000416754 BRCA2P51587 3418 aa11.52□□□□□ -0.57
RUNX1-206ENST00000416754 RANBP2P49792 3224 aaKnown RBP11.52□□□□□ -0.57
RUNX1-206ENST00000416754 MANSC4A6NHS7 340 aaPredicted RBP11.52□□□□□ -0.57
RUNX1-206ENST00000416754 ALDH1A1P00352 501 aa11.52□□□□□ -0.57
RUNX1-206ENST00000416754 RIPK4P57078 832 aa11.52□□□□□ -0.57
RUNX1-206ENST00000416754 TXNRD3Q86VQ6 643 aa11.52□□□□□ -0.57
RUNX1-206ENST00000416754 SLC17A8Q8NDX2 589 aa11.52□□□□□ -0.57
RUNX1-206ENST00000416754 WNK4Q96J92 1243 aa11.52□□□□□ -0.57
RUNX1-206ENST00000416754 PTPN18Q99952 460 aa11.52□□□□□ -0.57
RUNX1-206ENST00000416754 PCDHAC2Q9Y5I4 1007 aa11.52□□□□□ -0.57
RUNX1-206ENST00000416754 PODNQ7Z5L7 613 aa11.51□□□□□ -0.57
RUNX1-206ENST00000416754 ERO1AQ96HE7 468 aa11.51□□□□□ -0.57
RUNX1-206ENST00000416754 ZNF333Q96JL9 665 aa11.51□□□□□ -0.57
RUNX1-206ENST00000416754 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
RUNX1-206ENST00000416754 RBM27Q9P2N5 1060 aaKnown RBP11.51□□□□□ -0.57
RUNX1-206ENST00000416754 PTCH2Q9Y6C5 1203 aa11.51□□□□□ -0.57
RUNX1-206ENST00000416754 ATP2B4P23634 1241 aa11.5□□□□□ -0.57
RUNX1-206ENST00000416754 SLC4A8Q2Y0W8 1093 aa11.5□□□□□ -0.57
RUNX1-206ENST00000416754 KIAA0825Q8IV33 1275 aa11.5□□□□□ -0.57
RUNX1-206ENST00000416754 ZBED3Q96IU2 234 aaPredicted RBP11.5□□□□□ -0.57
RUNX1-206ENST00000416754 XDHP47989 1333 aa11.5□□□□□ -0.57
RUNX1-206ENST00000416754 AOX1Q06278 1338 aa11.5□□□□□ -0.57
RUNX1-206ENST00000416754 KLRK1P26718 216 aa11.49□□□□□ -0.57
RUNX1-206ENST00000416754 INHBEP58166 350 aa11.49□□□□□ -0.57
RUNX1-206ENST00000416754 SP3Q02447 781 aa11.49□□□□□ -0.57
RUNX1-206ENST00000416754 TRIM28Q13263 835 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms