RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 PRDM10Q9NQV6 1147 aa22.31■■□□□ 1.16
PDLIM2-208ENST00000416159 ZNF804BA4D1E1 1349 aa22.31■■□□□ 1.16
PDLIM2-208ENST00000416159 GRM8O00222 908 aa22.3■■□□□ 1.16
PDLIM2-208ENST00000416159 USP17L8P0C7I0 530 aa22.3■■□□□ 1.16
PDLIM2-208ENST00000416159 GRM1Q13255 1194 aa22.3■■□□□ 1.16
PDLIM2-208ENST00000416159 IFIT5Q13325 482 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-208ENST00000416159 C9orf78Q9NZ63 289 aaPredicted RBP22.3■■□□□ 1.16
PDLIM2-208ENST00000416159 CHMP3Q9Y3E7 222 aa22.3■■□□□ 1.16
PDLIM2-208ENST00000416159 E9PSI1 815 aa22.29■■□□□ 1.16
PDLIM2-208ENST00000416159 MAP2K2P36507 400 aa22.29■■□□□ 1.16
PDLIM2-208ENST00000416159 CHRNDQ07001 517 aa22.29■■□□□ 1.16
PDLIM2-208ENST00000416159 SLC4A10Q6U841 1118 aa22.29■■□□□ 1.16
PDLIM2-208ENST00000416159 SRCIN1Q9C0H9 1055 aa22.29■■□□□ 1.16
PDLIM2-208ENST00000416159 KCNJ4P48050 445 aa22.28■■□□□ 1.16
PDLIM2-208ENST00000416159 STRIP1Q5VSL9 837 aa22.28■■□□□ 1.16
PDLIM2-208ENST00000416159 LMBR1LQ6UX01 489 aa22.28■■□□□ 1.16
PDLIM2-208ENST00000416159 TXNRD3Q86VQ6 643 aa22.28■■□□□ 1.16
PDLIM2-208ENST00000416159 SULF1Q8IWU6 871 aa22.28■■□□□ 1.16
PDLIM2-208ENST00000416159 SCARF1Q14162 830 aa22.27■■□□□ 1.16
PDLIM2-208ENST00000416159 MYOZ2Q9NPC6 264 aa22.27■■□□□ 1.16
PDLIM2-208ENST00000416159 GGA3Q9NZ52 723 aa22.27■■□□□ 1.16
PDLIM2-208ENST00000416159 MYO3BQ8WXR4 1341 aa22.27■■□□□ 1.16
PDLIM2-208ENST00000416159 ADM5C9JUS6 153 aa22.26■■□□□ 1.15
PDLIM2-208ENST00000416159 CCDC57Q2TAC2 916 aa22.26■■□□□ 1.15
PDLIM2-208ENST00000416159 EPHA10Q5JZY3 1008 aa22.26■■□□□ 1.15
PDLIM2-208ENST00000416159 DACT2Q5SW24 774 aa22.26■■□□□ 1.15
PDLIM2-208ENST00000416159 DLK2Q6UY11 383 aa22.26■■□□□ 1.15
PDLIM2-208ENST00000416159 C2orf69Q8N8R5 385 aa22.26■■□□□ 1.15
PDLIM2-208ENST00000416159 BEGAINQ9BUH8 593 aa22.26■■□□□ 1.15
PDLIM2-208ENST00000416159 GBA2Q9HCG7 927 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-208ENST00000416159 MMP14P50281 582 aa22.25■■□□□ 1.15
PDLIM2-208ENST00000416159 TTLL5Q6EMB2 1281 aa22.25■■□□□ 1.15
PDLIM2-208ENST00000416159 MRPL50Q8N5N7 158 aaKnown RBP22.25■■□□□ 1.15
PDLIM2-208ENST00000416159 FBXW7Q969H0 707 aa22.25■■□□□ 1.15
PDLIM2-208ENST00000416159 THSD7BQ9C0I4 1608 aa22.24■■□□□ 1.15
PDLIM2-208ENST00000416159 AOC2O75106 756 aa22.24■■□□□ 1.15
PDLIM2-208ENST00000416159 LBX1P52954 281 aa22.24■■□□□ 1.15
PDLIM2-208ENST00000416159 HUNKP57058 714 aa22.24■■□□□ 1.15
PDLIM2-208ENST00000416159 SLFN5Q08AF3 891 aa22.24■■□□□ 1.15
PDLIM2-208ENST00000416159 ANGEL2Q5VTE6 544 aaKnown RBP22.24■■□□□ 1.15
PDLIM2-208ENST00000416159 OGFOD1Q8N543 542 aa22.24■■□□□ 1.15
PDLIM2-208ENST00000416159 ASTN2O75129 1339 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-208ENST00000416159 TAF5LO75529 589 aa22.23■■□□□ 1.15
PDLIM2-208ENST00000416159 HSPA8P11142 646 aaKnown RBP22.23■■□□□ 1.15
PDLIM2-208ENST00000416159 KLRK1P26718 216 aa22.23■■□□□ 1.15
PDLIM2-208ENST00000416159 TAF7LQ5H9L4 462 aa22.23■■□□□ 1.15
PDLIM2-208ENST00000416159 C15orf52Q6ZUT6 534 aaKnown RBP22.23■■□□□ 1.15
PDLIM2-208ENST00000416159 HELBQ8NG08 1087 aaPredicted RBP22.23■■□□□ 1.15
PDLIM2-208ENST00000416159 PITPNM2Q9BZ72 1349 aa22.23■■□□□ 1.15
PDLIM2-208ENST00000416159 LDHAL6AQ6ZMR3 332 aa22.22■■□□□ 1.15
PDLIM2-208ENST00000416159 MXD3Q9BW11 206 aa22.22■■□□□ 1.15
PDLIM2-208ENST00000416159 CD209Q9NNX6 404 aa22.22■■□□□ 1.15
PDLIM2-208ENST00000416159 PTPRCP08575 1304 aa22.22■■□□□ 1.15
PDLIM2-208ENST00000416159 ZNF594Q96JF6 807 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-208ENST00000416159 CNNM1Q9NRU3 951 aa22.21■■□□□ 1.15
PDLIM2-208ENST00000416159 CCER2I3L3R5 266 aa22.2■■□□□ 1.14
PDLIM2-208ENST00000416159 GTF2IP78347 998 aa22.2■■□□□ 1.14
PDLIM2-208ENST00000416159 NOGQ13253 232 aa22.2■■□□□ 1.14
PDLIM2-208ENST00000416159 RGMBQ6NW40 437 aa22.2■■□□□ 1.14
PDLIM2-208ENST00000416159 SSH1Q8WYL5 1049 aa22.2■■□□□ 1.14
PDLIM2-208ENST00000416159 CDCA5Q96FF9 252 aa22.2■■□□□ 1.14
PDLIM2-208ENST00000416159 SUCLG2Q96I99 432 aa22.2■■□□□ 1.14
PDLIM2-208ENST00000416159 HDAC9Q9UKV0 1011 aa22.2■■□□□ 1.14
PDLIM2-208ENST00000416159 UTYO14607 1347 aa22.2■■□□□ 1.14
PDLIM2-208ENST00000416159 IRS2Q9Y4H2 1338 aa22.2■■□□□ 1.14
PDLIM2-208ENST00000416159 SNAP23O00161 211 aa22.19■■□□□ 1.14
PDLIM2-208ENST00000416159 NBPF7P0C2Y1 421 aaPredicted RBP22.19■■□□□ 1.14
PDLIM2-208ENST00000416159 BRPF1P55201 1214 aaPredicted RBP22.19■■□□□ 1.14
PDLIM2-208ENST00000416159 ZNF804AQ7Z570 1209 aa22.19■■□□□ 1.14
PDLIM2-208ENST00000416159 ZNF646O15015 1829 aaPredicted RBP22.18■■□□□ 1.14
PDLIM2-208ENST00000416159 CA12O43570 354 aa22.18■■□□□ 1.14
PDLIM2-208ENST00000416159 PLIN1O60240 522 aa22.18■■□□□ 1.14
PDLIM2-208ENST00000416159 NBPF9Q3BBW0 867 aa22.18■■□□□ 1.14
PDLIM2-208ENST00000416159 ALDH1L2Q3SY69 923 aa22.18■■□□□ 1.14
PDLIM2-208ENST00000416159 CCDC102AQ96A19 550 aa22.18■■□□□ 1.14
PDLIM2-208ENST00000416159 WNT10BO00744 389 aa22.17■■□□□ 1.14
PDLIM2-208ENST00000416159 CAPN15O75808 1086 aa22.17■■□□□ 1.14
PDLIM2-208ENST00000416159 CDCA7LQ96GN5 454 aa22.17■■□□□ 1.14
PDLIM2-208ENST00000416159 KAZALD1Q96I82 304 aa22.17■■□□□ 1.14
PDLIM2-208ENST00000416159 IL1R1P14778 569 aa22.16■■□□□ 1.14
PDLIM2-208ENST00000416159 FKBP1BP68106 108 aa22.16■■□□□ 1.14
PDLIM2-208ENST00000416159 KIAA0825Q8IV33 1275 aa22.16■■□□□ 1.14
PDLIM2-208ENST00000416159 TRMT2AQ8IZ69 625 aaKnown RBP22.16■■□□□ 1.14
PDLIM2-208ENST00000416159 A0A1B0GUL6 1792 aa22.15■■□□□ 1.14
PDLIM2-208ENST00000416159 FAM155AB1AL88 458 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-208ENST00000416159 ZNF157P51786 506 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-208ENST00000416159 UBE4AQ14139 1066 aa22.15■■□□□ 1.14
PDLIM2-208ENST00000416159 RABL6Q3YEC7 729 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-208ENST00000416159 CT47B1P0C2W7 299 aaPredicted RBP22.14■■□□□ 1.13
PDLIM2-208ENST00000416159 FKBP1AP62942 108 aaKnown RBP22.14■■□□□ 1.13
PDLIM2-208ENST00000416159 BICC1Q9H694 974 aaKnown RBP22.14■■□□□ 1.13
PDLIM2-208ENST00000416159 ZBED3Q96IU2 234 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-208ENST00000416159 ZIC5Q96T25 663 aa22.13■■□□□ 1.13
PDLIM2-208ENST00000416159 PUS3Q9BZE2 481 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-208ENST00000416159 SMC4Q9NTJ3 1288 aa22.13■■□□□ 1.13
PDLIM2-208ENST00000416159 MROH5Q6ZUA9 1318 aa22.12■■□□□ 1.13
PDLIM2-208ENST00000416159 SASH1O94885 1247 aa22.12■■□□□ 1.13
PDLIM2-208ENST00000416159 USP44Q9H0E7 712 aa22.12■■□□□ 1.13
PDLIM2-208ENST00000416159 SCAF8Q9UPN6 1271 aaKnown RBP22.12■■□□□ 1.13
PDLIM2-208ENST00000416159 RIPOR2Q9Y4F9 1068 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms