RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 MKRN3Q13064 507 aaKnown RBP17.03■□□□□ 0.32
CTHRC1-202ENST00000415886 TTLL12Q14166 644 aaPredicted RBP17.03■□□□□ 0.32
CTHRC1-202ENST00000415886 PRPF38BQ5VTL8 546 aaKnown RBP17.03■□□□□ 0.32
CTHRC1-202ENST00000415886 FBXW7Q969H0 707 aa17.03■□□□□ 0.32
CTHRC1-202ENST00000415886 METTL22Q9BUU2 404 aaPredicted RBP17.03■□□□□ 0.32
CTHRC1-202ENST00000415886 MED23Q9ULK4 1368 aa17.02■□□□□ 0.32
CTHRC1-202ENST00000415886 CTSWP56202 376 aa17.02■□□□□ 0.32
CTHRC1-202ENST00000415886 PKN2Q16513 984 aaKnown RBP17.02■□□□□ 0.32
CTHRC1-202ENST00000415886 CDC5LQ99459 802 aaKnown RBP17.02■□□□□ 0.32
CTHRC1-202ENST00000415886 WNT10BO00744 389 aa17.01■□□□□ 0.31
CTHRC1-202ENST00000415886 DACT2Q5SW24 774 aa17.01■□□□□ 0.31
CTHRC1-202ENST00000415886 IFT57Q9NWB7 429 aa17.01■□□□□ 0.31
CTHRC1-202ENST00000415886 MINPP1Q9UNW1 487 aa17.01■□□□□ 0.31
CTHRC1-202ENST00000415886 GPR25O00155 361 aa17■□□□□ 0.31
CTHRC1-202ENST00000415886 SASH1O94885 1247 aa17■□□□□ 0.31
CTHRC1-202ENST00000415886 TM4SF4P48230 202 aa17■□□□□ 0.31
CTHRC1-202ENST00000415886 GNAI1P63096 354 aa17■□□□□ 0.31
CTHRC1-202ENST00000415886 CCDC184Q52MB2 194 aa17■□□□□ 0.31
CTHRC1-202ENST00000415886 C8orf58Q8NAV2 365 aa17■□□□□ 0.31
CTHRC1-202ENST00000415886 GREM2Q9H772 168 aa17■□□□□ 0.31
CTHRC1-202ENST00000415886 MAP3K2Q9Y2U5 619 aa17■□□□□ 0.31
CTHRC1-202ENST00000415886 PDE4DIPQ5VU43 2346 aa16.99■□□□□ 0.31
CTHRC1-202ENST00000415886 DDX58O95786 925 aaKnown RBP16.99■□□□□ 0.31
CTHRC1-202ENST00000415886 NF2P35240 595 aa16.99■□□□□ 0.31
CTHRC1-202ENST00000415886 CCT4P50991 539 aaKnown RBP16.99■□□□□ 0.31
CTHRC1-202ENST00000415886 PRKG1Q13976 671 aa16.99■□□□□ 0.31
CTHRC1-202ENST00000415886 OGFOD1Q8N543 542 aa16.99■□□□□ 0.31
CTHRC1-202ENST00000415886 TTLL11Q8NHH1 800 aa16.99■□□□□ 0.31
CTHRC1-202ENST00000415886 BSDC1Q9NW68 430 aaPredicted RBP16.99■□□□□ 0.31
CTHRC1-202ENST00000415886 MYO3BQ8WXR4 1341 aa16.98■□□□□ 0.31
CTHRC1-202ENST00000415886 IGKV5-2P06315 115 aa16.98■□□□□ 0.31
CTHRC1-202ENST00000415886 STRIP1Q5VSL9 837 aa16.98■□□□□ 0.31
CTHRC1-202ENST00000415886 TXNRD3Q86VQ6 643 aa16.98■□□□□ 0.31
CTHRC1-202ENST00000415886 R3HDMLQ9H3Y0 253 aa16.98■□□□□ 0.31
CTHRC1-202ENST00000415886 MYH3P11055 1940 aa16.98■□□□□ 0.31
CTHRC1-202ENST00000415886 PTPN12Q05209 780 aaKnown RBP16.97■□□□□ 0.31
CTHRC1-202ENST00000415886 SREBF2Q12772 1141 aa16.97■□□□□ 0.31
CTHRC1-202ENST00000415886 NOM1Q5C9Z4 860 aaKnown RBP16.97■□□□□ 0.31
CTHRC1-202ENST00000415886 CCDC30Q5VVM6 783 aa16.97■□□□□ 0.31
CTHRC1-202ENST00000415886 FBXO46Q6PJ61 603 aaPredicted RBP16.97■□□□□ 0.31
CTHRC1-202ENST00000415886 CHMP4AQ9BY43 222 aa16.97■□□□□ 0.31
CTHRC1-202ENST00000415886 COA1Q9GZY4 146 aa16.97■□□□□ 0.31
CTHRC1-202ENST00000415886 KLRK1P26718 216 aa16.96■□□□□ 0.31
CTHRC1-202ENST00000415886 CWF19L2Q2TBE0 894 aaKnown RBP16.96■□□□□ 0.31
CTHRC1-202ENST00000415886 ARMC9Q7Z3E5 817 aa16.96■□□□□ 0.31
CTHRC1-202ENST00000415886 KIAA0825Q8IV33 1275 aa16.96■□□□□ 0.31
CTHRC1-202ENST00000415886 FZD1Q9UP38 647 aa16.96■□□□□ 0.31
CTHRC1-202ENST00000415886 PI4KAP2A4QPH2 592 aa16.95■□□□□ 0.3
CTHRC1-202ENST00000415886 FKTNO75072 461 aa16.95■□□□□ 0.3
CTHRC1-202ENST00000415886 KSR2Q6VAB6 950 aa16.95■□□□□ 0.3
CTHRC1-202ENST00000415886 APOBEC3FQ8IUX4 373 aaKnown RBP16.95■□□□□ 0.3
CTHRC1-202ENST00000415886 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
CTHRC1-202ENST00000415886 PI4KAP1Q8N8J0 262 aa16.95■□□□□ 0.3
CTHRC1-202ENST00000415886 CFHR5Q9BXR6 569 aa16.95■□□□□ 0.3
CTHRC1-202ENST00000415886 SPRYD7Q5W111 196 aa16.94■□□□□ 0.3
CTHRC1-202ENST00000415886 TTLL5Q6EMB2 1281 aa16.94■□□□□ 0.3
CTHRC1-202ENST00000415886 FAM9BQ8IZU0 186 aa16.94■□□□□ 0.3
CTHRC1-202ENST00000415886 ANGEL1Q9UNK9 670 aaKnown RBP16.94■□□□□ 0.3
CTHRC1-202ENST00000415886 LEMD3Q9Y2U8 911 aa16.94■□□□□ 0.3
CTHRC1-202ENST00000415886 ZNF804BA4D1E1 1349 aa16.94■□□□□ 0.3
CTHRC1-202ENST00000415886 NEURL1BA8MQ27 555 aa16.93■□□□□ 0.3
CTHRC1-202ENST00000415886 IGHMBP2P38935 993 aaKnown RBP16.93■□□□□ 0.3
CTHRC1-202ENST00000415886 GTF2IP78347 998 aa16.93■□□□□ 0.3
CTHRC1-202ENST00000415886 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
CTHRC1-202ENST00000415886 LDLRAD1Q5T700 205 aa16.93■□□□□ 0.3
CTHRC1-202ENST00000415886 UBE3BQ7Z3V4 1068 aa16.93■□□□□ 0.3
CTHRC1-202ENST00000415886 ZBED3Q96IU2 234 aaPredicted RBP16.93■□□□□ 0.3
CTHRC1-202ENST00000415886 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.93■□□□□ 0.3
CTHRC1-202ENST00000415886 SALL2Q9Y467 1007 aaPredicted RBP16.93■□□□□ 0.3
CTHRC1-202ENST00000415886 SSC5DA1L4H1 1573 aa16.92■□□□□ 0.3
CTHRC1-202ENST00000415886 H7C1W4 665 aa16.91■□□□□ 0.3
CTHRC1-202ENST00000415886 ITGA6P23229 1130 aa16.91■□□□□ 0.3
CTHRC1-202ENST00000415886 MMP14P50281 582 aa16.91■□□□□ 0.3
CTHRC1-202ENST00000415886 CCDC27Q2M243 656 aa16.91■□□□□ 0.3
CTHRC1-202ENST00000415886 COL1A1P02452 1464 aaPredicted RBP16.91■□□□□ 0.3
CTHRC1-202ENST00000415886 G2E3Q7L622 706 aa16.9■□□□□ 0.3
CTHRC1-202ENST00000415886 IFNL1Q8IU54 200 aa16.9■□□□□ 0.3
CTHRC1-202ENST00000415886 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
CTHRC1-202ENST00000415886 TSR2Q969E8 191 aaKnown RBP16.9■□□□□ 0.3
CTHRC1-202ENST00000415886 ANKRD2Q9GZV1 360 aa16.9■□□□□ 0.3
CTHRC1-202ENST00000415886 DEFB129Q9H1M3 183 aa16.9■□□□□ 0.3
CTHRC1-202ENST00000415886 PCDHAC2Q9Y5I4 1007 aa16.9■□□□□ 0.3
CTHRC1-202ENST00000415886 MANSC4A6NHS7 340 aaPredicted RBP16.89■□□□□ 0.29
CTHRC1-202ENST00000415886 SNAP23O00161 211 aa16.89■□□□□ 0.29
CTHRC1-202ENST00000415886 ALDH1A1P00352 501 aa16.89■□□□□ 0.29
CTHRC1-202ENST00000415886 KCNJ4P48050 445 aa16.89■□□□□ 0.29
CTHRC1-202ENST00000415886 CHRNDQ07001 517 aa16.89■□□□□ 0.29
CTHRC1-202ENST00000415886 CERS5Q8N5B7 392 aa16.89■□□□□ 0.29
CTHRC1-202ENST00000415886 CLMNQ96JQ2 1002 aa16.89■□□□□ 0.29
CTHRC1-202ENST00000415886 MPHOSPH8Q99549 860 aa16.89■□□□□ 0.29
CTHRC1-202ENST00000415886 PLA2G12BQ9BX93 195 aa16.89■□□□□ 0.29
CTHRC1-202ENST00000415886 STK31Q9BXU1 1019 aa16.89■□□□□ 0.29
CTHRC1-202ENST00000415886 CD209Q9NNX6 404 aa16.89■□□□□ 0.29
CTHRC1-202ENST00000415886 TRIM17Q9Y577 477 aa16.89■□□□□ 0.29
CTHRC1-202ENST00000415886 IGF2BP3O00425 579 aaKnown RBP eCLIP16.88■□□□□ 0.29
CTHRC1-202ENST00000415886 DLGAP5Q15398 846 aa16.88■□□□□ 0.29
CTHRC1-202ENST00000415886 MAP3K11Q16584 847 aa16.88■□□□□ 0.29
CTHRC1-202ENST00000415886 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
CTHRC1-202ENST00000415886 OTOP1Q7RTM1 612 aa16.88■□□□□ 0.29
CTHRC1-202ENST00000415886 SLC10A4Q96EP9 437 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms