RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 LINS1Q8NG48 757 aa12.22□□□□□ -0.45
LINC01090-201ENST00000415357 GPR101Q96P66 508 aaPredicted RBP12.22□□□□□ -0.45
LINC01090-201ENST00000415357 BCL2L13Q9BXK5 485 aa12.22□□□□□ -0.45
LINC01090-201ENST00000415357 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
LINC01090-201ENST00000415357 GJA3Q9Y6H8 435 aa12.22□□□□□ -0.45
LINC01090-201ENST00000415357 LTBP1Q14766 1721 aa12.22□□□□□ -0.45
LINC01090-201ENST00000415357 SPEF2Q9C093 1822 aa12.21□□□□□ -0.45
LINC01090-201ENST00000415357 EIF6P56537 245 aaKnown RBP12.21□□□□□ -0.45
LINC01090-201ENST00000415357 CAMK2BQ13554 666 aa12.21□□□□□ -0.45
LINC01090-201ENST00000415357 BEND3Q5T5X7 828 aa12.21□□□□□ -0.45
LINC01090-201ENST00000415357 MRPL50Q8N5N7 158 aaKnown RBP12.21□□□□□ -0.45
LINC01090-201ENST00000415357 SUPT20HQ8NEM7 779 aa12.21□□□□□ -0.45
LINC01090-201ENST00000415357 TTLL11Q8NHH1 800 aa12.21□□□□□ -0.45
LINC01090-201ENST00000415357 FAM163AQ96GL9 167 aaPredicted RBP12.21□□□□□ -0.45
LINC01090-201ENST00000415357 GREM2Q9H772 168 aa12.21□□□□□ -0.45
LINC01090-201ENST00000415357 NSFL1CQ9UNZ2 370 aaKnown RBP12.21□□□□□ -0.45
LINC01090-201ENST00000415357 MYH3P11055 1940 aa12.21□□□□□ -0.46
LINC01090-201ENST00000415357 KIAA2012Q0VF49 1180 aa12.2□□□□□ -0.46
LINC01090-201ENST00000415357 SLC4A10Q6U841 1118 aa12.2□□□□□ -0.46
LINC01090-201ENST00000415357 TRMT2AQ8IZ69 625 aaKnown RBP12.2□□□□□ -0.46
LINC01090-201ENST00000415357 SMC1BQ8NDV3 1235 aa12.2□□□□□ -0.46
LINC01090-201ENST00000415357 KCNV2Q8TDN2 545 aa12.2□□□□□ -0.46
LINC01090-201ENST00000415357 SSH1Q8WYL5 1049 aa12.2□□□□□ -0.46
LINC01090-201ENST00000415357 TAF1DQ9H5J8 278 aaPredicted RBP12.2□□□□□ -0.46
LINC01090-201ENST00000415357 POLLQ9UGP5 575 aa12.2□□□□□ -0.46
LINC01090-201ENST00000415357 C6orf229H3BNL8 230 aa12.19□□□□□ -0.46
LINC01090-201ENST00000415357 SLC34A2O95436 690 aa12.19□□□□□ -0.46
LINC01090-201ENST00000415357 HTRA3P83110 453 aa12.19□□□□□ -0.46
LINC01090-201ENST00000415357 FSTL1Q12841 308 aa12.19□□□□□ -0.46
LINC01090-201ENST00000415357 FAM161AQ3B820 660 aa12.19□□□□□ -0.46
LINC01090-201ENST00000415357 ANKRD18AQ8IVF6 992 aa12.19□□□□□ -0.46
LINC01090-201ENST00000415357 GPC2Q8N158 579 aa12.19□□□□□ -0.46
LINC01090-201ENST00000415357 SCN4AP35499 1836 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 IQCA1LA6NCM1 817 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 YDJCA8MPS7 323 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 RAD17O75943 681 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 CXCL9Q07325 125 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 EAPPQ56P03 285 aaPredicted RBP12.18□□□□□ -0.46
LINC01090-201ENST00000415357 TBC1D16Q8TBP0 767 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 CDC5LQ99459 802 aaKnown RBP12.18□□□□□ -0.46
LINC01090-201ENST00000415357 PLA2G12BQ9BX93 195 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 VPS33BQ9H267 617 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 DBNDD1Q9H9R9 158 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 HACL1Q9UJ83 578 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 ZNRF3Q9ULT6 936 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 PCDHGA4Q9Y5G9 962 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 RTL9Q8NET4 1388 aa12.18□□□□□ -0.46
LINC01090-201ENST00000415357 GRM8O00222 908 aa12.17□□□□□ -0.46
LINC01090-201ENST00000415357 ST18O60284 1047 aa12.17□□□□□ -0.46
LINC01090-201ENST00000415357 UFL1O94874 794 aa12.17□□□□□ -0.46
LINC01090-201ENST00000415357 EPHX2P34913 555 aa12.17□□□□□ -0.46
LINC01090-201ENST00000415357 SCNN1DP51172 638 aa12.17□□□□□ -0.46
LINC01090-201ENST00000415357 WASHC4Q2M389 1173 aa12.17□□□□□ -0.46
LINC01090-201ENST00000415357 EPHA10Q5JZY3 1008 aa12.17□□□□□ -0.46
LINC01090-201ENST00000415357 OXER1Q8TDS5 423 aa12.17□□□□□ -0.46
LINC01090-201ENST00000415357 PTCD2Q8WV60 388 aaKnown RBP12.17□□□□□ -0.46
LINC01090-201ENST00000415357 SMC4Q9NTJ3 1288 aa12.17□□□□□ -0.46
LINC01090-201ENST00000415357 ANKIB1Q9P2G1 1089 aa12.17□□□□□ -0.46
LINC01090-201ENST00000415357 ADAMTSL1Q8N6G6 1762 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 WTIPA6NIX2 430 aaPredicted RBP12.16□□□□□ -0.46
LINC01090-201ENST00000415357 DPYSL4O14531 572 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 CSF1RP07333 972 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 ITGA6P23229 1130 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 EPS15P42566 896 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 APLP1P51693 650 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 FOXO4P98177 505 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 ARSIQ5FYB1 569 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 CIAPIN1Q6FI81 312 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 KHSRPQ92945 711 aaKnown RBP eCLIP12.16□□□□□ -0.467e-7■■■□□ 16.8
LINC01090-201ENST00000415357 SRCIN1Q9C0H9 1055 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 PODXL2Q9NZ53 605 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 CHMP3Q9Y3E7 222 aa12.16□□□□□ -0.46
LINC01090-201ENST00000415357 PTPRCP08575 1304 aa12.15□□□□□ -0.46
LINC01090-201ENST00000415357 XDHP47989 1333 aa12.15□□□□□ -0.46
LINC01090-201ENST00000415357 ECE2O60344 883 aa12.15□□□□□ -0.46
LINC01090-201ENST00000415357 ALDH1L1O75891 902 aa12.15□□□□□ -0.46
LINC01090-201ENST00000415357 LMOD1P29536 600 aaPredicted RBP12.15□□□□□ -0.46
LINC01090-201ENST00000415357 GMPSP49915 693 aaPredicted RBP12.15□□□□□ -0.46
LINC01090-201ENST00000415357 MAP3K9P80192 1104 aa12.15□□□□□ -0.46
LINC01090-201ENST00000415357 HNRNPUQ00839 825 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC01090-201ENST00000415357 LDHDQ86WU2 507 aa12.15□□□□□ -0.46
LINC01090-201ENST00000415357 EYA3Q99504 573 aa12.15□□□□□ -0.46
LINC01090-201ENST00000415357 ZSWIM6Q9HCJ5 1215 aa12.15□□□□□ -0.46
LINC01090-201ENST00000415357 KCNQ5Q9NR82 932 aa12.15□□□□□ -0.46
LINC01090-201ENST00000415357 C9orf78Q9NZ63 289 aaPredicted RBP12.15□□□□□ -0.46
LINC01090-201ENST00000415357 MINPP1Q9UNW1 487 aa12.15□□□□□ -0.46
LINC01090-201ENST00000415357 TBC1D12O60347 775 aa12.14□□□□□ -0.47
LINC01090-201ENST00000415357 IGHMBP2P38935 993 aaKnown RBP12.14□□□□□ -0.47
LINC01090-201ENST00000415357 ALDH1L2Q3SY69 923 aa12.14□□□□□ -0.47
LINC01090-201ENST00000415357 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
LINC01090-201ENST00000415357 LMBR1LQ6UX01 489 aa12.14□□□□□ -0.47
LINC01090-201ENST00000415357 SUCLG2Q96I99 432 aa12.14□□□□□ -0.47
LINC01090-201ENST00000415357 ZC3H12CQ9C0D7 883 aaKnown RBP12.14□□□□□ -0.47
LINC01090-201ENST00000415357 BSDC1Q9NW68 430 aaPredicted RBP12.14□□□□□ -0.47
LINC01090-201ENST00000415357 SHTN1A0MZ66 631 aa12.13□□□□□ -0.47
LINC01090-201ENST00000415357 ANKRD18BA2A2Z9 1011 aa12.13□□□□□ -0.47
LINC01090-201ENST00000415357 PSMD14O00487 310 aa12.13□□□□□ -0.47
LINC01090-201ENST00000415357 NBPF7P0C2Y1 421 aaPredicted RBP12.13□□□□□ -0.47
LINC01090-201ENST00000415357 MAP1SQ66K74 1059 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms