RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 NEUROD6Q96NK8 337 aa16.14■□□□□ 0.18
CNOT4-204ENST00000414802 POLLQ9UGP5 575 aa16.14■□□□□ 0.18
CNOT4-204ENST00000414802 ZNF804BA4D1E1 1349 aa16.14■□□□□ 0.17
CNOT4-204ENST00000414802 SCN9AQ15858 1988 aa16.14■□□□□ 0.17
CNOT4-204ENST00000414802 C6orf229H3BNL8 230 aa16.14■□□□□ 0.17
CNOT4-204ENST00000414802 TBC1D16Q8TBP0 767 aa16.14■□□□□ 0.17
CNOT4-204ENST00000414802 DBNDD2Q9BQY9 259 aa16.14■□□□□ 0.17
CNOT4-204ENST00000414802 PODXL2Q9NZ53 605 aa16.14■□□□□ 0.17
CNOT4-204ENST00000414802 PSME4Q14997 1843 aa16.13■□□□□ 0.17
CNOT4-204ENST00000414802 SLC5A1P13866 664 aa16.13■□□□□ 0.17
CNOT4-204ENST00000414802 YBX3P16989 372 aaKnown RBP eCLIP16.13■□□□□ 0.17
CNOT4-204ENST00000414802 PDE4AP27815 886 aa16.13■□□□□ 0.17
CNOT4-204ENST00000414802 GPR108Q9NPR9 543 aa16.13■□□□□ 0.17
CNOT4-204ENST00000414802 DBNLQ9UJU6 430 aaKnown RBP16.13■□□□□ 0.17
CNOT4-204ENST00000414802 AKAP2Q9Y2D5 859 aa16.13■□□□□ 0.17
CNOT4-204ENST00000414802 ZNF646O15015 1829 aaPredicted RBP16.12■□□□□ 0.17
CNOT4-204ENST00000414802 MYH7P12883 1935 aa16.12■□□□□ 0.17
CNOT4-204ENST00000414802 ATP2B4P23634 1241 aa16.12■□□□□ 0.17
CNOT4-204ENST00000414802 UBE4AQ14139 1066 aa16.12■□□□□ 0.17
CNOT4-204ENST00000414802 TSHZ3Q63HK5 1081 aa16.12■□□□□ 0.17
CNOT4-204ENST00000414802 LPIN2Q92539 896 aa16.12■□□□□ 0.17
CNOT4-204ENST00000414802 LEMD3Q9Y2U8 911 aa16.12■□□□□ 0.17
CNOT4-204ENST00000414802 TIAM2Q8IVF5 1701 aa16.12■□□□□ 0.17
CNOT4-204ENST00000414802 IFIT2P09913 472 aaKnown RBP16.11■□□□□ 0.17
CNOT4-204ENST00000414802 RASSF7Q02833 373 aa16.11■□□□□ 0.17
CNOT4-204ENST00000414802 CC2D2BQ6DHV5 1058 aa16.11■□□□□ 0.17
CNOT4-204ENST00000414802 TXNRD3Q86VQ6 643 aa16.11■□□□□ 0.17
CNOT4-204ENST00000414802 XAGE2Q96GT9 111 aa16.11■□□□□ 0.17
CNOT4-204ENST00000414802 IRS2Q9Y4H2 1338 aa16.11■□□□□ 0.17
CNOT4-204ENST00000414802 COL4A5P29400 1685 aa16.11■□□□□ 0.17
CNOT4-204ENST00000414802 NFKBIEO00221 500 aa16.11■□□□□ 0.17
CNOT4-204ENST00000414802 RIMBP2O15034 1052 aa16.11■□□□□ 0.17
CNOT4-204ENST00000414802 IFIT1P09914 478 aaKnown RBP16.11■□□□□ 0.17
CNOT4-204ENST00000414802 GYG1P46976 350 aa16.11■□□□□ 0.17
CNOT4-204ENST00000414802 SOGA3Q5TF21 947 aa16.11■□□□□ 0.17
CNOT4-204ENST00000414802 MED23Q9ULK4 1368 aa16.1■□□□□ 0.17
CNOT4-204ENST00000414802 RTKN2Q8IZC4 609 aa16.1■□□□□ 0.17
CNOT4-204ENST00000414802 SALL3Q9BXA9 1300 aa16.09■□□□□ 0.17
CNOT4-204ENST00000414802 PHKA1P46020 1223 aa16.09■□□□□ 0.17
CNOT4-204ENST00000414802 RGS3P49796 1198 aa16.09■□□□□ 0.17
CNOT4-204ENST00000414802 FKBP4Q02790 459 aaKnown RBP eCLIP16.09■□□□□ 0.17
CNOT4-204ENST00000414802 ZNF277Q9NRM2 450 aaPredicted RBP16.09■□□□□ 0.17
CNOT4-204ENST00000414802 BCAMP50895 628 aa16.08■□□□□ 0.17
CNOT4-204ENST00000414802 AOC3Q16853 763 aa16.08■□□□□ 0.17
CNOT4-204ENST00000414802 GORABQ5T7V8 394 aa16.08■□□□□ 0.17
CNOT4-204ENST00000414802 RTFDC1Q9BY42 306 aaPredicted RBP16.08■□□□□ 0.17
CNOT4-204ENST00000414802 TAOK3Q9H2K8 898 aa16.08■□□□□ 0.17
CNOT4-204ENST00000414802 IQSEC3Q9UPP2 1182 aaPredicted RBP16.08■□□□□ 0.17
CNOT4-204ENST00000414802 DOCK2Q92608 1830 aa16.08■□□□□ 0.16
CNOT4-204ENST00000414802 MX1P20591 662 aa16.08■□□□□ 0.16
CNOT4-204ENST00000414802 GPR162Q16538 588 aa16.08■□□□□ 0.16
CNOT4-204ENST00000414802 PSMD1Q99460 953 aa16.08■□□□□ 0.16
CNOT4-204ENST00000414802 COL1A1P02452 1464 aaPredicted RBP16.07■□□□□ 0.16
CNOT4-204ENST00000414802 PPIP5K2O43314 1243 aa16.07■□□□□ 0.16
CNOT4-204ENST00000414802 WASHC4Q2M389 1173 aa16.07■□□□□ 0.16
CNOT4-204ENST00000414802 CCDC102BQ68D86 513 aa16.07■□□□□ 0.16
CNOT4-204ENST00000414802 ARHGAP27Q6ZUM4 889 aa16.07■□□□□ 0.16
CNOT4-204ENST00000414802 PLEKHM2Q8IWE5 1019 aa16.07■□□□□ 0.16
CNOT4-204ENST00000414802 FAM84BQ96KN1 310 aaPredicted RBP16.07■□□□□ 0.16
CNOT4-204ENST00000414802 EYA3Q99504 573 aa16.07■□□□□ 0.16
CNOT4-204ENST00000414802 DOK7Q18PE1 504 aa16.06■□□□□ 0.16
CNOT4-204ENST00000414802 GRIPAP1Q4V328 841 aa16.06■□□□□ 0.16
CNOT4-204ENST00000414802 TTC39AQ5SRH9 613 aa16.06■□□□□ 0.16
CNOT4-204ENST00000414802 SUPT20HQ8NEM7 779 aa16.06■□□□□ 0.16
CNOT4-204ENST00000414802 PRELPP51888 382 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 PDE1AP54750 535 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 C15orf52Q6ZUT6 534 aaKnown RBP16.05■□□□□ 0.16
CNOT4-204ENST00000414802 ZNF804AQ7Z570 1209 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 VPS37DQ86XT2 251 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 ZC3H12CQ9C0D7 883 aaKnown RBP16.05■□□□□ 0.16
CNOT4-204ENST00000414802 DBNDD1Q9H9R9 158 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 NDUFB9Q9Y6M9 179 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 HIBADHP31937 336 aaKnown RBP16.05■□□□□ 0.16
CNOT4-204ENST00000414802 IARSP41252 1262 aaKnown RBP16.05■□□□□ 0.16
CNOT4-204ENST00000414802 KIAA2012Q0VF49 1180 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 SCARF1Q14162 830 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 CAVIN4Q5BKX8 364 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 PI16Q6UXB8 463 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 FBXO33Q7Z6M2 555 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 GPATCH3Q96I76 525 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 ECHDC1Q9NTX5 307 aa16.05■□□□□ 0.16
CNOT4-204ENST00000414802 LTBP3Q9NS15 1303 aa16.04■□□□□ 0.16
CNOT4-204ENST00000414802 CCDC158Q5M9N0 1113 aa16.04■□□□□ 0.16
CNOT4-204ENST00000414802 LARGE2Q8N3Y3 721 aa16.04■□□□□ 0.16
CNOT4-204ENST00000414802 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
CNOT4-204ENST00000414802 SNRKQ9NRH2 765 aa16.04■□□□□ 0.16
CNOT4-204ENST00000414802 JAG2Q9Y219 1238 aa16.04■□□□□ 0.16
CNOT4-204ENST00000414802 TTC41PQ6P2S7 1318 aa16.03■□□□□ 0.16
CNOT4-204ENST00000414802 MAST2Q6P0Q8 1798 aa16.03■□□□□ 0.16
CNOT4-204ENST00000414802 ECE2O60344 883 aa16.03■□□□□ 0.16
CNOT4-204ENST00000414802 ARID4AP29374 1257 aaPredicted RBP16.03■□□□□ 0.16
CNOT4-204ENST00000414802 MCAMP43121 646 aa16.03■□□□□ 0.16
CNOT4-204ENST00000414802 RASGRF1Q13972 1273 aa16.03■□□□□ 0.16
CNOT4-204ENST00000414802 BOLA2Q9H3K6 86 aa16.03■□□□□ 0.16
CNOT4-204ENST00000414802 STAP2Q9UGK3 403 aa16.03■□□□□ 0.16
CNOT4-204ENST00000414802 ADAMTSL1Q8N6G6 1762 aa16.03■□□□□ 0.16
CNOT4-204ENST00000414802 G3V3G9 751 aa16.02■□□□□ 0.16
CNOT4-204ENST00000414802 MAP4K4O95819 1239 aaPredicted RBP16.02■□□□□ 0.16
CNOT4-204ENST00000414802 CHAF1AQ13111 956 aaPredicted RBP16.02■□□□□ 0.16
CNOT4-204ENST00000414802 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms