RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 PTPRAP18433 802 aa10.18□□□□□ -0.78
ATG4C-204ENST00000414558 EDN3P14138 238 aa10.17□□□□□ -0.78
ATG4C-204ENST00000414558 ECM1Q16610 540 aa10.17□□□□□ -0.78
ATG4C-204ENST00000414558 FOXD3Q9UJU5 478 aaPredicted RBP10.17□□□□□ -0.78
ATG4C-204ENST00000414558 EREGO14944 169 aa10.16□□□□□ -0.78
ATG4C-204ENST00000414558 BRD1O95696 1058 aa10.16□□□□□ -0.78
ATG4C-204ENST00000414558 ARHGAP4P98171 946 aa10.16□□□□□ -0.78
ATG4C-204ENST00000414558 SETDB1Q15047 1291 aa10.16□□□□□ -0.78
ATG4C-204ENST00000414558 POP1Q99575 1024 aaKnown RBP10.16□□□□□ -0.78
ATG4C-204ENST00000414558 TPSG1Q9NRR2 321 aa10.16□□□□□ -0.78
ATG4C-204ENST00000414558 DZANK1Q9NVP4 752 aa10.16□□□□□ -0.78
ATG4C-204ENST00000414558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.16□□□□□ -0.78
ATG4C-204ENST00000414558 FAM117BQ6P1L5 589 aa10.15□□□□□ -0.78
ATG4C-204ENST00000414558 ADAM19Q9H013 955 aa10.15□□□□□ -0.78
ATG4C-204ENST00000414558 AMOTL2Q9Y2J4 779 aa10.15□□□□□ -0.78
ATG4C-204ENST00000414558 LINC01387J3KSC0 135 aa10.14□□□□□ -0.79
ATG4C-204ENST00000414558 PDE2AO00408 941 aaPredicted RBP10.14□□□□□ -0.79
ATG4C-204ENST00000414558 ACPPP15309 386 aa10.14□□□□□ -0.79
ATG4C-204ENST00000414558 PDE3BQ13370 1112 aa10.14□□□□□ -0.79
ATG4C-204ENST00000414558 MRPL18Q9H0U6 180 aaKnown RBP10.14□□□□□ -0.79
ATG4C-204ENST00000414558 NFKBIEO00221 500 aa10.13□□□□□ -0.79
ATG4C-204ENST00000414558 NEFLP07196 543 aa10.13□□□□□ -0.79
ATG4C-204ENST00000414558 CABP4P57796 275 aa10.13□□□□□ -0.79
ATG4C-204ENST00000414558 TMEM102Q8N9M5 508 aaPredicted RBP10.13□□□□□ -0.79
ATG4C-204ENST00000414558 CITED4Q96RK1 184 aa10.13□□□□□ -0.79
ATG4C-204ENST00000414558 OSMRQ99650 979 aa10.13□□□□□ -0.79
ATG4C-204ENST00000414558 ZFYVE28Q9HCC9 887 aa10.13□□□□□ -0.79
ATG4C-204ENST00000414558 GNEQ9Y223 722 aaKnown RBP10.13□□□□□ -0.79
ATG4C-204ENST00000414558 EPHA1P21709 976 aa10.12□□□□□ -0.79
ATG4C-204ENST00000414558 TXNDC11Q6PKC3 985 aa10.12□□□□□ -0.79
ATG4C-204ENST00000414558 ADAMTSL4Q6UY14 1074 aa10.12□□□□□ -0.79
ATG4C-204ENST00000414558 WFDC12Q8WWY7 111 aa10.12□□□□□ -0.79
ATG4C-204ENST00000414558 SH2B1Q9NRF2 756 aaPredicted RBP10.12□□□□□ -0.79
ATG4C-204ENST00000414558 H3BRJ5 948 aa10.11□□□□□ -0.79
ATG4C-204ENST00000414558 CDC25BP30305 580 aa10.11□□□□□ -0.79
ATG4C-204ENST00000414558 KLHL23Q8NBE8 558 aa10.11□□□□□ -0.79
ATG4C-204ENST00000414558 ZKSCAN3Q9BRR0 538 aa10.11□□□□□ -0.79
ATG4C-204ENST00000414558 SOWAHDA6NJG2 315 aa10.1□□□□□ -0.79
ATG4C-204ENST00000414558 FSCN2O14926 492 aa10.1□□□□□ -0.79
ATG4C-204ENST00000414558 NOS3P29474 1203 aa10.1□□□□□ -0.79
ATG4C-204ENST00000414558 IREB2P48200 963 aaKnown RBP10.1□□□□□ -0.79
ATG4C-204ENST00000414558 RSPO4Q2I0M5 234 aaPredicted RBP10.1□□□□□ -0.79
ATG4C-204ENST00000414558 NKAPLQ5M9Q1 402 aa10.1□□□□□ -0.79
ATG4C-204ENST00000414558 TMEM130Q8N3G9 435 aa10.1□□□□□ -0.79
ATG4C-204ENST00000414558 WNT8BQ93098 351 aa10.1□□□□□ -0.79
ATG4C-204ENST00000414558 FAM129BQ96TA1 746 aa10.1□□□□□ -0.79
ATG4C-204ENST00000414558 AKTIPQ9H8T0 292 aa10.1□□□□□ -0.79
ATG4C-204ENST00000414558 TRPA1O75762 1119 aa10.09□□□□□ -0.79
ATG4C-204ENST00000414558 CD68P34810 354 aaPredicted RBP10.09□□□□□ -0.79
ATG4C-204ENST00000414558 GALNT11Q8NCW6 608 aa10.09□□□□□ -0.79
ATG4C-204ENST00000414558 NXPE3Q969Y0 559 aa10.09□□□□□ -0.79
ATG4C-204ENST00000414558 HHIPQ96QV1 700 aa10.09□□□□□ -0.79
ATG4C-204ENST00000414558 SEMA6BQ9H3T3 888 aa10.09□□□□□ -0.79
ATG4C-204ENST00000414558 F8W735 103 aaPredicted RBP10.08□□□□□ -0.8
ATG4C-204ENST00000414558 PIP4K2BP78356 416 aa10.08□□□□□ -0.8
ATG4C-204ENST00000414558 TMC1Q8TDI8 760 aa10.08□□□□□ -0.8
ATG4C-204ENST00000414558 BSNDQ8WZ55 320 aa10.08□□□□□ -0.8
ATG4C-204ENST00000414558 TP53INP1Q96A56 240 aa10.08□□□□□ -0.8
ATG4C-204ENST00000414558 SSBP4Q9BWG4 385 aaPredicted RBP10.08□□□□□ -0.8
ATG4C-204ENST00000414558 CARD10Q9BWT7 1032 aa10.08□□□□□ -0.8
ATG4C-204ENST00000414558 SEC31BQ9NQW1 1179 aa10.08□□□□□ -0.8
ATG4C-204ENST00000414558 SOX13Q9UN79 622 aa10.08□□□□□ -0.8
ATG4C-204ENST00000414558 H2AFB1P0C5Y9 115 aa10.07□□□□□ -0.8
ATG4C-204ENST00000414558 H2AFB2P0C5Z0 115 aa10.07□□□□□ -0.8
ATG4C-204ENST00000414558 PEAR1Q5VY43 1037 aaPredicted RBP10.07□□□□□ -0.8
ATG4C-204ENST00000414558 BHLHE41Q9C0J9 482 aaPredicted RBP10.07□□□□□ -0.8
ATG4C-204ENST00000414558 OSGEPQ9NPF4 335 aa10.07□□□□□ -0.8
ATG4C-204ENST00000414558 DYRK3O43781 588 aa10.06□□□□□ -0.8
ATG4C-204ENST00000414558 POLR3DP05423 398 aaPredicted RBP10.06□□□□□ -0.8
ATG4C-204ENST00000414558 FOXD4L6Q3SYB3 417 aaPredicted RBP10.06□□□□□ -0.8
ATG4C-204ENST00000414558 FOXD4L3Q6VB84 417 aaPredicted RBP10.06□□□□□ -0.8
ATG4C-204ENST00000414558 GALNT12Q8IXK2 581 aa10.06□□□□□ -0.8
ATG4C-204ENST00000414558 DMRTB1Q96MA1 342 aa10.06□□□□□ -0.8
ATG4C-204ENST00000414558 LATS2Q9NRM7 1088 aa10.06□□□□□ -0.8
ATG4C-204ENST00000414558 BIN2Q9UBW5 565 aaPredicted RBP10.06□□□□□ -0.8
ATG4C-204ENST00000414558 TM4SF5O14894 197 aa10.05□□□□□ -0.8
ATG4C-204ENST00000414558 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.05□□□□□ -0.8
ATG4C-204ENST00000414558 RBCK1Q9BYM8 510 aa10.05□□□□□ -0.8
ATG4C-204ENST00000414558 CPNE3O75131 537 aaKnown RBP10.04□□□□□ -0.8
ATG4C-204ENST00000414558 ARL4DP49703 201 aa10.04□□□□□ -0.8
ATG4C-204ENST00000414558 ACAD11Q709F0 780 aa10.04□□□□□ -0.8
ATG4C-204ENST00000414558 ASAP3Q8TDY4 903 aa10.04□□□□□ -0.8
ATG4C-204ENST00000414558 MEGF10Q96KG7 1140 aa10.04□□□□□ -0.8
ATG4C-204ENST00000414558 ALX3O95076 343 aa10.03□□□□□ -0.8
ATG4C-204ENST00000414558 KCNA1Q09470 495 aa10.03□□□□□ -0.8
ATG4C-204ENST00000414558 ORC1Q13415 861 aa10.03□□□□□ -0.8
ATG4C-204ENST00000414558 Q6ZS46 218 aa10.03□□□□□ -0.8
ATG4C-204ENST00000414558 SLC7A3Q8WY07 619 aa10.03□□□□□ -0.8
ATG4C-204ENST00000414558 KLHDC7BQ96G42 594 aa10.03□□□□□ -0.8
ATG4C-204ENST00000414558 DNAJC25Q9H1X3 360 aa10.03□□□□□ -0.8
ATG4C-204ENST00000414558 KCNK4Q9NYG8 393 aa10.03□□□□□ -0.8
ATG4C-204ENST00000414558 A0A1W2PP55 124 aa10.02□□□□□ -0.81
ATG4C-204ENST00000414558 GPR182O15218 404 aa10.02□□□□□ -0.81
ATG4C-204ENST00000414558 IGHA2P01877 340 aa10.02□□□□□ -0.81
ATG4C-204ENST00000414558 C19orf57Q0VDD7 668 aa10.02□□□□□ -0.81
ATG4C-204ENST00000414558 IKBKEQ14164 716 aa10.02□□□□□ -0.81
ATG4C-204ENST00000414558 DUOXA2Q1HG44 320 aa10.02□□□□□ -0.81
ATG4C-204ENST00000414558 VN1R5Q7Z5H4 357 aa10.02□□□□□ -0.81
ATG4C-204ENST00000414558 DZIP1LQ8IYY4 767 aaKnown RBP10.02□□□□□ -0.81
ATG4C-204ENST00000414558 AGGF1Q8N302 714 aaeCLIP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms