RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 GNA11P29992 359 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 CCDC174Q6PII3 467 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 DHX32Q7L7V1 743 aaKnown RBP19.79■□□□□ 0.76
PHRF1-202ENST00000413872 NECAB1Q8N987 351 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 SNX21Q969T3 373 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 USP21Q9UK80 565 aa19.79■□□□□ 0.76
PHRF1-202ENST00000413872 MYCNP04198 464 aaPredicted RBP19.78■□□□□ 0.76
PHRF1-202ENST00000413872 HIBADHP31937 336 aaKnown RBP19.78■□□□□ 0.76
PHRF1-202ENST00000413872 UBXN4Q92575 508 aa19.78■□□□□ 0.76
PHRF1-202ENST00000413872 TARBP1Q13395 1621 aaKnown RBP19.78■□□□□ 0.76
PHRF1-202ENST00000413872 CCDC172P0C7W6 258 aa19.78■□□□□ 0.76
PHRF1-202ENST00000413872 PRIM1P49642 420 aaKnown RBP19.78■□□□□ 0.76
PHRF1-202ENST00000413872 ADGBQ8N7X0 1667 aa19.78■□□□□ 0.76
PHRF1-202ENST00000413872 SBNO2Q9Y2G9 1366 aa19.78■□□□□ 0.76
PHRF1-202ENST00000413872 SPDYE3A6NKU9 549 aa19.78■□□□□ 0.76
PHRF1-202ENST00000413872 LEKR1Q6ZMV7 388 aa19.78■□□□□ 0.76
PHRF1-202ENST00000413872 TRIM75PA6NK02 468 aa19.77■□□□□ 0.76
PHRF1-202ENST00000413872 RIMBP2O15034 1052 aa19.77■□□□□ 0.76
PHRF1-202ENST00000413872 SPAG1Q07617 926 aa19.77■□□□□ 0.76
PHRF1-202ENST00000413872 FAM98CQ17RN3 349 aaKnown RBP19.77■□□□□ 0.76
PHRF1-202ENST00000413872 RBM28Q9NW13 759 aaKnown RBP19.77■□□□□ 0.76
PHRF1-202ENST00000413872 GGA1Q9UJY5 639 aa19.77■□□□□ 0.76
PHRF1-202ENST00000413872 AOX1Q06278 1338 aa19.77■□□□□ 0.76
PHRF1-202ENST00000413872 LTKP29376 864 aa19.77■□□□□ 0.76
PHRF1-202ENST00000413872 ZNF165P49910 485 aa19.77■□□□□ 0.76
PHRF1-202ENST00000413872 SUPT20HQ8NEM7 779 aa19.77■□□□□ 0.76
PHRF1-202ENST00000413872 NAP1L4Q99733 375 aaKnown RBP19.77■□□□□ 0.76
PHRF1-202ENST00000413872 LRRC2Q9BYS8 371 aa19.77■□□□□ 0.76
PHRF1-202ENST00000413872 UFL1O94874 794 aa19.77■□□□□ 0.76
PHRF1-202ENST00000413872 LIG1P18858 919 aa19.77■□□□□ 0.76
PHRF1-202ENST00000413872 GBP2P32456 591 aaPredicted RBP19.77■□□□□ 0.76
PHRF1-202ENST00000413872 UVSSAQ2YD98 709 aa19.77■□□□□ 0.76
PHRF1-202ENST00000413872 STAT6P42226 847 aa19.77■□□□□ 0.75
PHRF1-202ENST00000413872 CREB3L3Q68CJ9 461 aa19.77■□□□□ 0.75
PHRF1-202ENST00000413872 H0YHG0 523 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 KLHL40Q2TBA0 621 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 C16orf71Q8IYS4 520 aaPredicted RBP19.76■□□□□ 0.75
PHRF1-202ENST00000413872 MIGA1Q8NAN2 632 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 WDR66Q8TBY9 1149 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 A0A1B0GUL7 405 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 ZBTB7BO15156 539 aaPredicted RBP19.76■□□□□ 0.75
PHRF1-202ENST00000413872 RLBP1P12271 317 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 TMEM87AQ8NBN3 555 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 GOLGA6L9A6NEM1 432 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 MRPS27Q92552 414 aaKnown RBP19.76■□□□□ 0.75
PHRF1-202ENST00000413872 PANK2Q9BZ23 570 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 PLEKHG1Q9ULL1 1385 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 MCM3P25205 808 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 PAFAH1B1P43034 410 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 PLEKHM2Q8IWE5 1019 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 KIF18AQ8NI77 898 aa19.76■□□□□ 0.75
PHRF1-202ENST00000413872 GDPD2Q9HCC8 539 aa19.75■□□□□ 0.75
PHRF1-202ENST00000413872 KIAA0232Q92628 1395 aa19.75■□□□□ 0.75
PHRF1-202ENST00000413872 TRIM47Q96LD4 638 aa19.75■□□□□ 0.75
PHRF1-202ENST00000413872 BIN1O00499 593 aa19.75■□□□□ 0.75
PHRF1-202ENST00000413872 YEATS2Q9ULM3 1422 aa19.75■□□□□ 0.75
PHRF1-202ENST00000413872 CHMLP26374 656 aa19.75■□□□□ 0.75
PHRF1-202ENST00000413872 TNNI3KQ59H18 835 aa19.75■□□□□ 0.75
PHRF1-202ENST00000413872 TEX11Q8IYF3 940 aa19.75■□□□□ 0.75
PHRF1-202ENST00000413872 LGR6Q9HBX8 967 aa19.75■□□□□ 0.75
PHRF1-202ENST00000413872 FPGT-TNNI3KV9GXZ4 949 aa19.75■□□□□ 0.75
PHRF1-202ENST00000413872 HOOK2Q96ED9 719 aa19.74■□□□□ 0.75
PHRF1-202ENST00000413872 BICD1Q96G01 975 aa19.74■□□□□ 0.75
PHRF1-202ENST00000413872 TCEANC2Q96MN5 208 aa19.74■□□□□ 0.75
PHRF1-202ENST00000413872 EFCAB6Q5THR3 1501 aa19.74■□□□□ 0.75
PHRF1-202ENST00000413872 PDE6BP35913 854 aa19.74■□□□□ 0.75
PHRF1-202ENST00000413872 KIF4BQ2VIQ3 1234 aa19.74■□□□□ 0.75
PHRF1-202ENST00000413872 G2E3Q7L622 706 aa19.74■□□□□ 0.75
PHRF1-202ENST00000413872 ABCA8O94911 1581 aa19.74■□□□□ 0.75
PHRF1-202ENST00000413872 CTAGE1Q96RT6 745 aa19.74■□□□□ 0.75
PHRF1-202ENST00000413872 FLAD1Q8NFF5 587 aa19.74■□□□□ 0.75
PHRF1-202ENST00000413872 ALS2CR12Q96Q35 445 aa19.74■□□□□ 0.75
PHRF1-202ENST00000413872 H0YIN7 160 aa19.73■□□□□ 0.75
PHRF1-202ENST00000413872 EZRP15311 586 aaKnown RBP19.73■□□□□ 0.75
PHRF1-202ENST00000413872 DNAJC10Q8IXB1 793 aa19.73■□□□□ 0.75
PHRF1-202ENST00000413872 FERMT2Q96AC1 680 aa19.73■□□□□ 0.75
PHRF1-202ENST00000413872 MBD4O95243 580 aa19.73■□□□□ 0.75
PHRF1-202ENST00000413872 BRAPQ7Z569 592 aa19.73■□□□□ 0.75
PHRF1-202ENST00000413872 HCLS1P14317 486 aaPredicted RBP19.73■□□□□ 0.75
PHRF1-202ENST00000413872 KRT2P35908 639 aa19.73■□□□□ 0.75
PHRF1-202ENST00000413872 KRT79Q5XKE5 535 aa19.73■□□□□ 0.75
PHRF1-202ENST00000413872 LPIN2Q92539 896 aa19.73■□□□□ 0.75
PHRF1-202ENST00000413872 ERBB4Q15303 1308 aa19.72■□□□□ 0.75
PHRF1-202ENST00000413872 MAP9Q49MG5 647 aa19.72■□□□□ 0.75
PHRF1-202ENST00000413872 MLH3Q9UHC1 1453 aa19.72■□□□□ 0.75
PHRF1-202ENST00000413872 A1BGP04217 495 aa19.72■□□□□ 0.75
PHRF1-202ENST00000413872 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.72■□□□□ 0.75
PHRF1-202ENST00000413872 MROH5Q6ZUA9 1318 aa19.72■□□□□ 0.75
PHRF1-202ENST00000413872 RBM26Q5T8P6 1007 aaKnown RBP19.72■□□□□ 0.75
PHRF1-202ENST00000413872 RTL1A6NKG5 1358 aa19.72■□□□□ 0.75
PHRF1-202ENST00000413872 PSMA7O14818 248 aa19.72■□□□□ 0.75
PHRF1-202ENST00000413872 BAG6P46379 1132 aa19.72■□□□□ 0.75
PHRF1-202ENST00000413872 CASQ1P31415 396 aa19.71■□□□□ 0.75
PHRF1-202ENST00000413872 TMEM87BQ96K49 555 aa19.71■□□□□ 0.75
PHRF1-202ENST00000413872 TRIM35Q9UPQ4 493 aa19.71■□□□□ 0.75
PHRF1-202ENST00000413872 ANKRD62A6NC57 917 aa19.71■□□□□ 0.75
PHRF1-202ENST00000413872 F13A1P00488 732 aa19.71■□□□□ 0.75
PHRF1-202ENST00000413872 GCKRQ14397 625 aa19.71■□□□□ 0.75
PHRF1-202ENST00000413872 APPBP2Q92624 585 aa19.71■□□□□ 0.75
PHRF1-202ENST00000413872 INTS4Q96HW7 963 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms