RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ADM5C9JUS6 153 aa10.75□□□□□ -0.69
UPF3AP1-201ENST00000413731 NOGQ13253 232 aa10.75□□□□□ -0.69
UPF3AP1-201ENST00000413731 GPHNQ9NQX3 736 aaPredicted RBP10.75□□□□□ -0.69
UPF3AP1-201ENST00000413731 PODXL2Q9NZ53 605 aa10.75□□□□□ -0.69
UPF3AP1-201ENST00000413731 PAPPA2Q9BXP8 1791 aa10.75□□□□□ -0.69
UPF3AP1-201ENST00000413731 MYH3P11055 1940 aa10.74□□□□□ -0.69
UPF3AP1-201ENST00000413731 FAM155AB1AL88 458 aaPredicted RBP10.74□□□□□ -0.69
UPF3AP1-201ENST00000413731 H7C1D1 291 aa10.74□□□□□ -0.69
UPF3AP1-201ENST00000413731 RIPK4P57078 832 aa10.74□□□□□ -0.69
UPF3AP1-201ENST00000413731 TCIRG1Q13488 830 aa10.74□□□□□ -0.69
UPF3AP1-201ENST00000413731 TBC1D10BQ4KMP7 808 aaPredicted RBP10.74□□□□□ -0.69
UPF3AP1-201ENST00000413731 KRT26Q7Z3Y9 468 aa10.74□□□□□ -0.69
UPF3AP1-201ENST00000413731 CELF1Q92879 486 aaKnown RBP10.74□□□□□ -0.69
UPF3AP1-201ENST00000413731 GBA2Q9HCG7 927 aaPredicted RBP10.74□□□□□ -0.69
UPF3AP1-201ENST00000413731 ECE2O60344 883 aa10.73□□□□□ -0.69
UPF3AP1-201ENST00000413731 CD44P16070 742 aaKnown RBP10.73□□□□□ -0.69
UPF3AP1-201ENST00000413731 GPSM2P81274 684 aa10.73□□□□□ -0.69
UPF3AP1-201ENST00000413731 TMC4Q7Z404 712 aa10.73□□□□□ -0.69
UPF3AP1-201ENST00000413731 CCDC146Q8IYE0 955 aa10.73□□□□□ -0.69
UPF3AP1-201ENST00000413731 CHPF2Q9P2E5 772 aa10.73□□□□□ -0.69
UPF3AP1-201ENST00000413731 POLLQ9UGP5 575 aa10.73□□□□□ -0.69
UPF3AP1-201ENST00000413731 RIMBP2O15034 1052 aa10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 TMPOP42166 694 aaKnown RBP10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 SOX10P56693 466 aa10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 WASHC4Q2M389 1173 aa10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 KIF4BQ2VIQ3 1234 aa10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 RGMBQ6NW40 437 aa10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 DPF2Q92785 391 aa10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 ARID3AQ99856 593 aa10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 MRS2Q9HD23 443 aa10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 KCNQ5Q9NR82 932 aa10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 BABAM1Q9NWV8 329 aa10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 GGA3Q9NZ52 723 aa10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 NSFL1CQ9UNZ2 370 aaKnown RBP10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 ASTN2O75129 1339 aaPredicted RBP10.72□□□□□ -0.69
UPF3AP1-201ENST00000413731 LMOD3Q0VAK6 560 aa10.71□□□□□ -0.69
UPF3AP1-201ENST00000413731 DOK7Q18PE1 504 aa10.71□□□□□ -0.69
UPF3AP1-201ENST00000413731 RTL5Q5HYW3 569 aaPredicted RBP10.71□□□□□ -0.69
UPF3AP1-201ENST00000413731 PIP4P2Q8N4L2 257 aa10.71□□□□□ -0.69
UPF3AP1-201ENST00000413731 FAM89AQ96GI7 184 aa10.71□□□□□ -0.69
UPF3AP1-201ENST00000413731 ISCA1Q9BUE6 129 aa10.71□□□□□ -0.69
UPF3AP1-201ENST00000413731 EMILIN3Q9NT22 766 aa10.71□□□□□ -0.69
UPF3AP1-201ENST00000413731 SAGE1Q9NXZ1 904 aa10.71□□□□□ -0.69
UPF3AP1-201ENST00000413731 ZNF609O15014 1411 aa10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 ATP5J2-PTCD1G3V325 749 aa10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 C6orf229H3BNL8 230 aa10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 SLC10A3P09131 477 aa10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 RPS12P25398 132 aaKnown RBP10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 KIF23Q02241 960 aaPredicted RBP10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 SF3B3Q15393 1217 aaKnown RBP10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 HDGFL1Q5TGJ6 251 aa10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 PLBD2Q8NHP8 589 aa10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 TBC1D16Q8TBP0 767 aa10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 RUNDC1Q96C34 613 aa10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 DCPSQ96C86 337 aaKnown RBP10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 RNF186Q9NXI6 227 aa10.7□□□□□ -0.7
UPF3AP1-201ENST00000413731 TRPA1O75762 1119 aa10.69□□□□□ -0.7
UPF3AP1-201ENST00000413731 ZNF157P51786 506 aaPredicted RBP10.69□□□□□ -0.7
UPF3AP1-201ENST00000413731 RASAL3Q86YV0 1011 aa10.69□□□□□ -0.7
UPF3AP1-201ENST00000413731 C2orf69Q8N8R5 385 aa10.69□□□□□ -0.7
UPF3AP1-201ENST00000413731 CDCA5Q96FF9 252 aa10.69□□□□□ -0.7
UPF3AP1-201ENST00000413731 EYA3Q99504 573 aa10.69□□□□□ -0.7
UPF3AP1-201ENST00000413731 FAM117AQ9C073 453 aa10.69□□□□□ -0.7
UPF3AP1-201ENST00000413731 ADAMTS8Q9UP79 889 aa10.69□□□□□ -0.7
UPF3AP1-201ENST00000413731 CHL1O00533 1208 aa10.68□□□□□ -0.7
UPF3AP1-201ENST00000413731 IRS4O14654 1257 aaPredicted RBP10.68□□□□□ -0.7
UPF3AP1-201ENST00000413731 UFL1O94874 794 aa10.68□□□□□ -0.7
UPF3AP1-201ENST00000413731 DSG2Q14126 1118 aa10.68□□□□□ -0.7
UPF3AP1-201ENST00000413731 CCDC184Q52MB2 194 aa10.68□□□□□ -0.7
UPF3AP1-201ENST00000413731 SULF1Q8IWU6 871 aa10.68□□□□□ -0.7
UPF3AP1-201ENST00000413731 TMC2Q8TDI7 906 aa10.68□□□□□ -0.7
UPF3AP1-201ENST00000413731 CCDC102AQ96A19 550 aa10.68□□□□□ -0.7
UPF3AP1-201ENST00000413731 LAS1LQ9Y4W2 734 aaKnown RBP10.68□□□□□ -0.7
UPF3AP1-201ENST00000413731 A0A1B0GUL6 1792 aa10.67□□□□□ -0.7
UPF3AP1-201ENST00000413731 VIL1P09327 827 aaKnown RBP10.67□□□□□ -0.7
UPF3AP1-201ENST00000413731 ANGEL2Q5VTE6 544 aaKnown RBP10.67□□□□□ -0.7
UPF3AP1-201ENST00000413731 ANKRD13DQ6ZTN6 518 aa10.67□□□□□ -0.7
UPF3AP1-201ENST00000413731 SEC31BQ9NQW1 1179 aa10.67□□□□□ -0.7
UPF3AP1-201ENST00000413731 TRIM35Q9UPQ4 493 aa10.67□□□□□ -0.7
UPF3AP1-201ENST00000413731 ECM29Q5VYK3 1845 aa10.67□□□□□ -0.7
UPF3AP1-201ENST00000413731 LAMB1P07942 1786 aa10.67□□□□□ -0.7
UPF3AP1-201ENST00000413731 GRXCR2A6NFK2 248 aa10.66□□□□□ -0.7
UPF3AP1-201ENST00000413731 HOXB7P09629 217 aa10.66□□□□□ -0.7
UPF3AP1-201ENST00000413731 RPS8P62241 208 aaKnown RBP10.66□□□□□ -0.7
UPF3AP1-201ENST00000413731 CTU1Q7Z7A3 348 aaKnown RBP10.66□□□□□ -0.7
UPF3AP1-201ENST00000413731 DDRGK1Q96HY6 314 aa10.66□□□□□ -0.7
UPF3AP1-201ENST00000413731 CSRNP1Q96S65 589 aa10.66□□□□□ -0.7
UPF3AP1-201ENST00000413731 DBF4Q9UBU7 674 aaPredicted RBP10.66□□□□□ -0.7
UPF3AP1-201ENST00000413731 SCAF8Q9UPN6 1271 aaKnown RBP10.66□□□□□ -0.7
UPF3AP1-201ENST00000413731 TRPC6Q9Y210 931 aa10.66□□□□□ -0.7
UPF3AP1-201ENST00000413731 ZNF280AP59817 542 aaPredicted RBP10.65□□□□□ -0.7
UPF3AP1-201ENST00000413731 DUSP27Q5VZP5 1158 aa10.65□□□□□ -0.7
UPF3AP1-201ENST00000413731 RSBN1LQ6PCB5 846 aaPredicted RBP10.65□□□□□ -0.7
UPF3AP1-201ENST00000413731 MOB2Q70IA6 237 aa10.65□□□□□ -0.7
UPF3AP1-201ENST00000413731 MS4A3Q96HJ5 214 aa10.65□□□□□ -0.7
UPF3AP1-201ENST00000413731 CCDC85AQ96PX6 553 aaPredicted RBP10.65□□□□□ -0.7
UPF3AP1-201ENST00000413731 ZC3H12CQ9C0D7 883 aaKnown RBP10.65□□□□□ -0.7
UPF3AP1-201ENST00000413731 ANKIB1Q9P2G1 1089 aa10.65□□□□□ -0.7
UPF3AP1-201ENST00000413731 GGA1Q9UJY5 639 aa10.65□□□□□ -0.7
UPF3AP1-201ENST00000413731 SCARF1Q14162 830 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms