RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 GTF2IP78347 998 aa12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 GRM1Q13255 1194 aa12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 CST9Q5W186 159 aa12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 ANKRD44Q8N8A2 993 aa12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 JMYQ8N9B5 988 aa12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 KLHDC4Q8TBB5 520 aa12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 FRAT1Q92837 279 aaPredicted RBP12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 PGAP2Q9UHJ9 254 aa12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 LRRC37AA6NMS7 1700 aa12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 UTYO14607 1347 aa12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 ASTN2O75129 1339 aaPredicted RBP12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 SCN4AP35499 1836 aa12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 MED23Q9ULK4 1368 aa12.81□□□□□ -0.36
NCKIPSD-202ENST00000413374 BCAR3O75815 825 aa12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 CELF2O95319 508 aaKnown RBP12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 VEGFBP49765 207 aa12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 SCARF1Q14162 830 aa12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 KIF4BQ2VIQ3 1234 aa12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 DEFB115Q30KQ5 88 aa12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 TTLL5Q6EMB2 1281 aa12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 PAXIP1Q6ZW49 1069 aaPredicted RBP12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 CDC37L1Q7L3B6 337 aa12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 AGBL3Q8NEM8 1001 aa12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 ZC3H15Q8WU90 426 aaKnown RBP12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 API5Q9BZZ5 524 aaKnown RBP12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 SCAF8Q9UPN6 1271 aaKnown RBP12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 JAG2Q9Y219 1238 aa12.8□□□□□ -0.36
NCKIPSD-202ENST00000413374 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
NCKIPSD-202ENST00000413374 LRRC24Q50LG9 513 aa12.79□□□□□ -0.36
NCKIPSD-202ENST00000413374 DACT2Q5SW24 774 aa12.79□□□□□ -0.36
NCKIPSD-202ENST00000413374 DCPSQ96C86 337 aaKnown RBP12.79□□□□□ -0.36
NCKIPSD-202ENST00000413374 GMLQ99445 158 aa12.79□□□□□ -0.36
NCKIPSD-202ENST00000413374 CD209Q9NNX6 404 aa12.79□□□□□ -0.36
NCKIPSD-202ENST00000413374 TNNQ9UQP3 1299 aa12.79□□□□□ -0.36
NCKIPSD-202ENST00000413374 ADM5C9JUS6 153 aa12.78□□□□□ -0.36
NCKIPSD-202ENST00000413374 RABL6Q3YEC7 729 aaPredicted RBP12.78□□□□□ -0.36
NCKIPSD-202ENST00000413374 STRIP1Q5VSL9 837 aa12.78□□□□□ -0.36
NCKIPSD-202ENST00000413374 KRT26Q7Z3Y9 468 aa12.78□□□□□ -0.36
NCKIPSD-202ENST00000413374 MYOZ2Q9NPC6 264 aa12.78□□□□□ -0.36
NCKIPSD-202ENST00000413374 F8W031 263 aaPredicted RBP12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 UBTFL1P0CB47 393 aaPredicted RBP12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 HSPA1AP0DMV8 641 aaKnown RBP12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 HSPA1BP0DMV9 641 aaKnown RBP12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 GYG1P46976 350 aa12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 ZNF280AP59817 542 aaPredicted RBP12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 METTL24Q5JXM2 366 aa12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 ANGEL2Q5VTE6 544 aaKnown RBP12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 KIAA0825Q8IV33 1275 aa12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 GGA3Q9NZ52 723 aa12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 RIPOR2Q9Y4F9 1068 aa12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 CNTNAP1P78357 1384 aa12.77□□□□□ -0.37
NCKIPSD-202ENST00000413374 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
NCKIPSD-202ENST00000413374 CYP4F22Q6NT55 531 aa12.76□□□□□ -0.37
NCKIPSD-202ENST00000413374 ZNF804AQ7Z570 1209 aa12.76□□□□□ -0.37
NCKIPSD-202ENST00000413374 OGFOD1Q8N543 542 aa12.76□□□□□ -0.37
NCKIPSD-202ENST00000413374 IRS2Q9Y4H2 1338 aa12.76□□□□□ -0.37
NCKIPSD-202ENST00000413374 ADAMTSL1Q8N6G6 1762 aa12.76□□□□□ -0.37
NCKIPSD-202ENST00000413374 RASSF10A6NK89 507 aa12.75□□□□□ -0.37
NCKIPSD-202ENST00000413374 BRPF1P55201 1214 aaPredicted RBP12.75□□□□□ -0.37
NCKIPSD-202ENST00000413374 PRAMEF18Q5VWM3 479 aa12.75□□□□□ -0.37
NCKIPSD-202ENST00000413374 C15orf52Q6ZUT6 534 aaKnown RBP12.75□□□□□ -0.37
NCKIPSD-202ENST00000413374 SULF1Q8IWU6 871 aa12.75□□□□□ -0.37
NCKIPSD-202ENST00000413374 MEIS3Q99687 375 aa12.75□□□□□ -0.37
NCKIPSD-202ENST00000413374 WDR33Q9C0J8 1336 aaKnown RBP12.75□□□□□ -0.37
NCKIPSD-202ENST00000413374 SIL1Q9H173 461 aa12.75□□□□□ -0.37
NCKIPSD-202ENST00000413374 IQSEC3Q9UPP2 1182 aaPredicted RBP12.75□□□□□ -0.37
NCKIPSD-202ENST00000413374 LRRFIP2Q9Y608 721 aaKnown RBP12.75□□□□□ -0.37
NCKIPSD-202ENST00000413374 TLL2Q9Y6L7 1015 aa12.75□□□□□ -0.37
NCKIPSD-202ENST00000413374 MROH5Q6ZUA9 1318 aa12.74□□□□□ -0.37
NCKIPSD-202ENST00000413374 KIF16BQ96L93 1317 aa12.74□□□□□ -0.37
NCKIPSD-202ENST00000413374 IPO8O15397 1037 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-202ENST00000413374 SASH1O94885 1247 aa12.74□□□□□ -0.37
NCKIPSD-202ENST00000413374 HIBADHP31937 336 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-202ENST00000413374 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-202ENST00000413374 UBE4AQ14139 1066 aa12.74□□□□□ -0.37
NCKIPSD-202ENST00000413374 CERS5Q8N5B7 392 aa12.74□□□□□ -0.37
NCKIPSD-202ENST00000413374 ARHGAP45Q92619 1136 aa12.74□□□□□ -0.37
NCKIPSD-202ENST00000413374 FAM84BQ96KN1 310 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-202ENST00000413374 CAPNS2Q96L46 248 aa12.74□□□□□ -0.37
NCKIPSD-202ENST00000413374 WNT10BO00744 389 aa12.73□□□□□ -0.37
NCKIPSD-202ENST00000413374 AOC2O75106 756 aa12.73□□□□□ -0.37
NCKIPSD-202ENST00000413374 PDE8BO95263 885 aa12.73□□□□□ -0.37
NCKIPSD-202ENST00000413374 TRIM27P14373 513 aa12.73□□□□□ -0.37
NCKIPSD-202ENST00000413374 IL1R1P14778 569 aa12.73□□□□□ -0.37
NCKIPSD-202ENST00000413374 PTPN12Q05209 780 aaKnown RBP12.73□□□□□ -0.37
NCKIPSD-202ENST00000413374 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
NCKIPSD-202ENST00000413374 SAPCD2Q86UD0 394 aa12.73□□□□□ -0.37
NCKIPSD-202ENST00000413374 HDAC9Q9UKV0 1011 aa12.73□□□□□ -0.37
NCKIPSD-202ENST00000413374 PA2G4Q9UQ80 394 aaKnown RBP12.73□□□□□ -0.37
NCKIPSD-202ENST00000413374 PCDHAC2Q9Y5I4 1007 aa12.73□□□□□ -0.37
NCKIPSD-202ENST00000413374 MYO3BQ8WXR4 1341 aa12.72□□□□□ -0.37
NCKIPSD-202ENST00000413374 EYA2O00167 538 aa12.72□□□□□ -0.37
NCKIPSD-202ENST00000413374 FRAT2O75474 233 aaPredicted RBP12.72□□□□□ -0.37
NCKIPSD-202ENST00000413374 BCAMP50895 628 aa12.72□□□□□ -0.37
NCKIPSD-202ENST00000413374 CHAF1AQ13111 956 aaPredicted RBP12.72□□□□□ -0.37
NCKIPSD-202ENST00000413374 COL13A1Q5TAT6 717 aaPredicted RBP12.72□□□□□ -0.37
NCKIPSD-202ENST00000413374 ATF7IPQ6VMQ6 1270 aa12.72□□□□□ -0.37
NCKIPSD-202ENST00000413374 VPS37DQ86XT2 251 aa12.72□□□□□ -0.37
NCKIPSD-202ENST00000413374 C2orf69Q8N8R5 385 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms