RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 CDC5LQ99459 802 aaKnown RBP16.71■□□□□ 0.27
PTPRN-203ENST00000412847 MYO3BQ8WXR4 1341 aa16.7■□□□□ 0.26
PTPRN-203ENST00000412847 TM4SF4P48230 202 aa16.7■□□□□ 0.26
PTPRN-203ENST00000412847 COL1A1P02452 1464 aaPredicted RBP16.69■□□□□ 0.26
PTPRN-203ENST00000412847 GPR25O00155 361 aa16.69■□□□□ 0.26
PTPRN-203ENST00000412847 DDX58O95786 925 aaKnown RBP16.69■□□□□ 0.26
PTPRN-203ENST00000412847 ZNF853P0CG23 659 aa16.69■□□□□ 0.26
PTPRN-203ENST00000412847 CTSWP56202 376 aa16.69■□□□□ 0.26
PTPRN-203ENST00000412847 SREBF2Q12772 1141 aa16.69■□□□□ 0.26
PTPRN-203ENST00000412847 NOM1Q5C9Z4 860 aaKnown RBP16.69■□□□□ 0.26
PTPRN-203ENST00000412847 DACT2Q5SW24 774 aa16.69■□□□□ 0.26
PTPRN-203ENST00000412847 FBXO46Q6PJ61 603 aaPredicted RBP16.69■□□□□ 0.26
PTPRN-203ENST00000412847 OGFOD1Q8N543 542 aa16.69■□□□□ 0.26
PTPRN-203ENST00000412847 FBXW7Q969H0 707 aa16.69■□□□□ 0.26
PTPRN-203ENST00000412847 METTL22Q9BUU2 404 aaPredicted RBP16.69■□□□□ 0.26
PTPRN-203ENST00000412847 ARAP2Q8WZ64 1704 aa16.69■□□□□ 0.26
PTPRN-203ENST00000412847 ELL2O00472 640 aaPredicted RBP16.68■□□□□ 0.26
PTPRN-203ENST00000412847 MKRN3Q13064 507 aaKnown RBP16.68■□□□□ 0.26
PTPRN-203ENST00000412847 MXD3Q9BW11 206 aa16.68■□□□□ 0.26
PTPRN-203ENST00000412847 IFT57Q9NWB7 429 aa16.68■□□□□ 0.26
PTPRN-203ENST00000412847 ADAMTS8Q9UP79 889 aa16.68■□□□□ 0.26
PTPRN-203ENST00000412847 WTIPA6NIX2 430 aaPredicted RBP16.67■□□□□ 0.26
PTPRN-203ENST00000412847 WNT10BO00744 389 aa16.67■□□□□ 0.26
PTPRN-203ENST00000412847 SASH1O94885 1247 aa16.67■□□□□ 0.26
PTPRN-203ENST00000412847 GNAI1P63096 354 aa16.67■□□□□ 0.26
PTPRN-203ENST00000412847 CCT4P50991 539 aaKnown RBP16.66■□□□□ 0.26
PTPRN-203ENST00000412847 CALD1Q05682 793 aaKnown RBP16.66■□□□□ 0.26
PTPRN-203ENST00000412847 STRIP1Q5VSL9 837 aa16.66■□□□□ 0.26
PTPRN-203ENST00000412847 ARMC9Q7Z3E5 817 aa16.66■□□□□ 0.26
PTPRN-203ENST00000412847 APOBEC3FQ8IUX4 373 aaKnown RBP16.66■□□□□ 0.26
PTPRN-203ENST00000412847 CFHR5Q9BXR6 569 aa16.66■□□□□ 0.26
PTPRN-203ENST00000412847 COA1Q9GZY4 146 aa16.66■□□□□ 0.26
PTPRN-203ENST00000412847 BSDC1Q9NW68 430 aaPredicted RBP16.66■□□□□ 0.26
PTPRN-203ENST00000412847 MINPP1Q9UNW1 487 aa16.66■□□□□ 0.26
PTPRN-203ENST00000412847 MAP3K2Q9Y2U5 619 aa16.66■□□□□ 0.26
PTPRN-203ENST00000412847 FKTNO75072 461 aa16.65■□□□□ 0.26
PTPRN-203ENST00000412847 TTLL11Q8NHH1 800 aa16.65■□□□□ 0.26
PTPRN-203ENST00000412847 GREM2Q9H772 168 aa16.65■□□□□ 0.26
PTPRN-203ENST00000412847 MMP14P50281 582 aa16.64■□□□□ 0.25
PTPRN-203ENST00000412847 PTPN12Q05209 780 aaKnown RBP16.64■□□□□ 0.25
PTPRN-203ENST00000412847 PRKG1Q13976 671 aa16.64■□□□□ 0.25
PTPRN-203ENST00000412847 CCDC30Q5VVM6 783 aa16.64■□□□□ 0.25
PTPRN-203ENST00000412847 C8orf58Q8NAV2 365 aa16.64■□□□□ 0.25
PTPRN-203ENST00000412847 IGKV5-2P06315 115 aa16.63■□□□□ 0.25
PTPRN-203ENST00000412847 CHMP4AQ9BY43 222 aa16.63■□□□□ 0.25
PTPRN-203ENST00000412847 ANGEL1Q9UNK9 670 aaKnown RBP16.63■□□□□ 0.25
PTPRN-203ENST00000412847 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
PTPRN-203ENST00000412847 ALDH1A1P00352 501 aa16.62■□□□□ 0.25
PTPRN-203ENST00000412847 IGHMBP2P38935 993 aaKnown RBP16.62■□□□□ 0.25
PTPRN-203ENST00000412847 NEXNQ0ZGT2 675 aa16.62■□□□□ 0.25
PTPRN-203ENST00000412847 SPRYD7Q5W111 196 aa16.62■□□□□ 0.25
PTPRN-203ENST00000412847 KSR2Q6VAB6 950 aa16.62■□□□□ 0.25
PTPRN-203ENST00000412847 TXNRD3Q86VQ6 643 aa16.62■□□□□ 0.25
PTPRN-203ENST00000412847 KIAA0825Q8IV33 1275 aa16.62■□□□□ 0.25
PTPRN-203ENST00000412847 R3HDMLQ9H3Y0 253 aa16.62■□□□□ 0.25
PTPRN-203ENST00000412847 SSC5DA1L4H1 1573 aa16.62■□□□□ 0.25
PTPRN-203ENST00000412847 ZNF804BA4D1E1 1349 aa16.62■□□□□ 0.25
PTPRN-203ENST00000412847 PI4KAP2A4QPH2 592 aa16.61■□□□□ 0.25
PTPRN-203ENST00000412847 APAF1O14727 1248 aa16.61■□□□□ 0.25
PTPRN-203ENST00000412847 LDLRAD1Q5T700 205 aa16.61■□□□□ 0.25
PTPRN-203ENST00000412847 TTLL5Q6EMB2 1281 aa16.61■□□□□ 0.25
PTPRN-203ENST00000412847 PI4KAP1Q8N8J0 262 aa16.61■□□□□ 0.25
PTPRN-203ENST00000412847 MANSC4A6NHS7 340 aaPredicted RBP16.6■□□□□ 0.25
PTPRN-203ENST00000412847 KLRK1P26718 216 aa16.6■□□□□ 0.25
PTPRN-203ENST00000412847 GTF2IP78347 998 aa16.6■□□□□ 0.25
PTPRN-203ENST00000412847 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
PTPRN-203ENST00000412847 CWF19L2Q2TBE0 894 aaKnown RBP16.6■□□□□ 0.25
PTPRN-203ENST00000412847 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
PTPRN-203ENST00000412847 GCC1Q96CN9 775 aa16.6■□□□□ 0.25
PTPRN-203ENST00000412847 ZBED3Q96IU2 234 aaPredicted RBP16.6■□□□□ 0.25
PTPRN-203ENST00000412847 ANKRD2Q9GZV1 360 aa16.6■□□□□ 0.25
PTPRN-203ENST00000412847 NEURL1BA8MQ27 555 aa16.59■□□□□ 0.25
PTPRN-203ENST00000412847 STK31Q9BXU1 1019 aa16.59■□□□□ 0.25
PTPRN-203ENST00000412847 FZD1Q9UP38 647 aa16.59■□□□□ 0.25
PTPRN-203ENST00000412847 TRIM17Q9Y577 477 aa16.59■□□□□ 0.25
PTPRN-203ENST00000412847 MYH13Q9UKX3 1938 aa16.58■□□□□ 0.25
PTPRN-203ENST00000412847 KIAA0100Q14667 2235 aaKnown RBP16.58■□□□□ 0.25
PTPRN-203ENST00000412847 ZBTB48P10074 688 aaPredicted RBP16.58■□□□□ 0.24
PTPRN-203ENST00000412847 KCNJ4P48050 445 aa16.58■□□□□ 0.24
PTPRN-203ENST00000412847 INHBEP58166 350 aa16.58■□□□□ 0.24
PTPRN-203ENST00000412847 IFNL1Q8IU54 200 aa16.58■□□□□ 0.24
PTPRN-203ENST00000412847 TSPYL6Q8N831 410 aa16.58■□□□□ 0.24
PTPRN-203ENST00000412847 WNK4Q96J92 1243 aa16.58■□□□□ 0.24
PTPRN-203ENST00000412847 MPHOSPH8Q99549 860 aa16.58■□□□□ 0.24
PTPRN-203ENST00000412847 DEFB129Q9H1M3 183 aa16.58■□□□□ 0.24
PTPRN-203ENST00000412847 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.58■□□□□ 0.24
PTPRN-203ENST00000412847 ZSWIM8A7E2V4 1837 aa16.57■□□□□ 0.24
PTPRN-203ENST00000412847 H7C1W4 665 aa16.57■□□□□ 0.24
PTPRN-203ENST00000412847 ITGA6P23229 1130 aa16.57■□□□□ 0.24
PTPRN-203ENST00000412847 DLGAP5Q15398 846 aa16.57■□□□□ 0.24
PTPRN-203ENST00000412847 MAP3K11Q16584 847 aa16.57■□□□□ 0.24
PTPRN-203ENST00000412847 OTOP1Q7RTM1 612 aa16.57■□□□□ 0.24
PTPRN-203ENST00000412847 SLC10A4Q96EP9 437 aa16.57■□□□□ 0.24
PTPRN-203ENST00000412847 PPP2R3BQ9Y5P8 575 aa16.57■□□□□ 0.24
PTPRN-203ENST00000412847 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
PTPRN-203ENST00000412847 CLMNQ96JQ2 1002 aa16.56■□□□□ 0.24
PTPRN-203ENST00000412847 PLA2G12BQ9BX93 195 aa16.56■□□□□ 0.24
PTPRN-203ENST00000412847 CD209Q9NNX6 404 aa16.56■□□□□ 0.24
PTPRN-203ENST00000412847 IGF2BP3O00425 579 aaKnown RBP eCLIP16.55■□□□□ 0.24
PTPRN-203ENST00000412847 PPP1R12BO60237 982 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms