RNA–Protein interactions for RNA: ENST00000412777.6

LRTOMT-204, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 4

Gene LRTOMT, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-204	ENST00000412777	RPS12	P25398	132 aa	Known RBP	11.23	□□□□□ -0.61
LRTOMT-204	ENST00000412777	PTPN12	Q05209	780 aa	Known RBP	11.23	□□□□□ -0.61
LRTOMT-204	ENST00000412777	LRRC24	Q50LG9	513 aa		11.23	□□□□□ -0.61
LRTOMT-204	ENST00000412777	EAPP	Q56P03	285 aa	Predicted RBP	11.23	□□□□□ -0.61
LRTOMT-204	ENST00000412777	CHADL	Q6NUI6	762 aa		11.23	□□□□□ -0.61
LRTOMT-204	ENST00000412777	FTSJ3	Q8IY81	847 aa	Known RBP	11.23	□□□□□ -0.61
LRTOMT-204	ENST00000412777	DPF2	Q92785	391 aa		11.23	□□□□□ -0.61
LRTOMT-204	ENST00000412777	RCAN3	Q9UKA8	241 aa		11.23	□□□□□ -0.61
LRTOMT-204	ENST00000412777	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.23	□□□□□ -0.61
LRTOMT-204	ENST00000412777	MROH5	Q6ZUA9	1318 aa		11.23	□□□□□ -0.61
LRTOMT-204	ENST00000412777	ZNF609	O15014	1411 aa		11.23	□□□□□ -0.61
LRTOMT-204	ENST00000412777	PLIN1	O60240	522 aa		11.22	□□□□□ -0.61
LRTOMT-204	ENST00000412777	GNAI2	P04899	355 aa		11.22	□□□□□ -0.61
LRTOMT-204	ENST00000412777	MTX1	Q13505	466 aa		11.22	□□□□□ -0.61
LRTOMT-204	ENST00000412777	UBE4A	Q14139	1066 aa		11.22	□□□□□ -0.61
LRTOMT-204	ENST00000412777	USP50	Q70EL3	339 aa	Predicted RBP	11.22	□□□□□ -0.61
LRTOMT-204	ENST00000412777	VGLL2	Q8N8G2	317 aa		11.22	□□□□□ -0.61
LRTOMT-204	ENST00000412777	ADARB2	Q9NS39	739 aa	Known RBP	11.22	□□□□□ -0.61
LRTOMT-204	ENST00000412777	CNOT7	Q9UIV1	285 aa	Known RBP	11.22	□□□□□ -0.61
LRTOMT-204	ENST00000412777	SHTN1	A0MZ66	631 aa		11.21	□□□□□ -0.61
LRTOMT-204	ENST00000412777	USP17L3	A6NCW0	530 aa		11.21	□□□□□ -0.61
LRTOMT-204	ENST00000412777	USP17L4	A6NCW7	530 aa		11.21	□□□□□ -0.61
LRTOMT-204	ENST00000412777	EYA2	O00167	538 aa		11.21	□□□□□ -0.61
LRTOMT-204	ENST00000412777	METTL24	Q5JXM2	366 aa		11.21	□□□□□ -0.61
LRTOMT-204	ENST00000412777	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.21	□□□□□ -0.61
LRTOMT-204	ENST00000412777	USP17L1	Q7RTZ2	530 aa		11.21	□□□□□ -0.61
LRTOMT-204	ENST00000412777	ITPRIP	Q8IWB1	547 aa		11.21	□□□□□ -0.61
LRTOMT-204	ENST00000412777	MICALL2	Q8IY33	904 aa		11.21	□□□□□ -0.61
LRTOMT-204	ENST00000412777	GML	Q99445	158 aa		11.21	□□□□□ -0.61
LRTOMT-204	ENST00000412777	FBXO3	Q9UK99	471 aa		11.21	□□□□□ -0.61
LRTOMT-204	ENST00000412777	CEP350	Q5VT06	3117 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	POLR2A	P24928	1970 aa	Known RBP	11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777		H7C1D1	291 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	CIAO1	O76071	339 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	PDE8B	O95263	885 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	MS4A1	P11836	297 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	DACT2	Q5SW24	774 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	STRIP1	Q5VSL9	837 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	ATG9A	Q7Z3C6	839 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	ZNF804A	Q7Z570	1209 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	AGBL3	Q8NEM8	1001 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	TRPM4	Q8TD43	1214 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	PANK1	Q8TE04	598 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	CD209	Q9NNX6	404 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	COPRS	Q9NQ92	184 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	CLEC11A	Q9Y240	323 aa		11.2	□□□□□ -0.62
LRTOMT-204	ENST00000412777	ZBTB7B	O15156	539 aa	Predicted RBP	11.19	□□□□□ -0.62
LRTOMT-204	ENST00000412777	SRGAP3	O43295	1099 aa		11.19	□□□□□ -0.62
LRTOMT-204	ENST00000412777	IL1R1	P14778	569 aa		11.19	□□□□□ -0.62
LRTOMT-204	ENST00000412777	APLP1	P51693	650 aa		11.19	□□□□□ -0.62
LRTOMT-204	ENST00000412777	HIRA	P54198	1017 aa	Predicted RBP	11.19	□□□□□ -0.62
LRTOMT-204	ENST00000412777	MAP1S	Q66K74	1059 aa	Predicted RBP	11.19	□□□□□ -0.62
LRTOMT-204	ENST00000412777	FAM84B	Q96KN1	310 aa	Predicted RBP	11.19	□□□□□ -0.62
LRTOMT-204	ENST00000412777	SIL1	Q9H173	461 aa		11.19	□□□□□ -0.62
LRTOMT-204	ENST00000412777	PA2G4	Q9UQ80	394 aa	Known RBP	11.19	□□□□□ -0.62
LRTOMT-204	ENST00000412777	PASK	Q96RG2	1323 aa		11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	ITGBL1	O95965	494 aa	Predicted RBP	11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	FGFR2	P21802	821 aa		11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	IL15	P40933	162 aa	Predicted RBP	11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	ZNF280A	P59817	542 aa	Predicted RBP	11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	GTF2I	P78347	998 aa		11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	PUM3	Q15397	648 aa	Known RBP	11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	TTLL5	Q6EMB2	1281 aa		11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	SAMD7	Q7Z3H4	446 aa		11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	CNTROB	Q8N137	903 aa		11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	FBXW7	Q969H0	707 aa		11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	YTHDC1	Q96MU7	727 aa	Known RBP	11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	MXD3	Q9BW11	206 aa		11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	PGAP2	Q9UHJ9	254 aa		11.18	□□□□□ -0.62
LRTOMT-204	ENST00000412777	MYO3B	Q8WXR4	1341 aa		11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	PNMA6E	A0A0J9YXQ4	647 aa		11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	EGFR	P00533	1210 aa		11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	USP17L8	P0C7I0	530 aa		11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	HIBADH	P31937	336 aa	Known RBP	11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	GYG1	P46976	350 aa		11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	FBXO33	Q7Z6M2	555 aa		11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	TDRD7	Q8NHU6	1098 aa	Known RBP	11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	ZC3H15	Q8WU90	426 aa	Known RBP	11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	C1orf115	Q9H7X2	142 aa		11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	CEP126	Q9P2H0	1117 aa		11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	TRPM7	Q96QT4	1865 aa		11.17	□□□□□ -0.62
LRTOMT-204	ENST00000412777	FAM205A	Q6ZU69	1335 aa		11.16	□□□□□ -0.62
LRTOMT-204	ENST00000412777	SASH1	O94885	1247 aa		11.16	□□□□□ -0.62
LRTOMT-204	ENST00000412777	IFIT1	P09914	478 aa	Known RBP	11.16	□□□□□ -0.62
LRTOMT-204	ENST00000412777	ATP8B2	P98198	1209 aa		11.16	□□□□□ -0.62
LRTOMT-204	ENST00000412777	POLA2	Q14181	598 aa		11.16	□□□□□ -0.62
LRTOMT-204	ENST00000412777	MVP	Q14764	893 aa	Known RBP	11.16	□□□□□ -0.62
LRTOMT-204	ENST00000412777	KIF4B	Q2VIQ3	1234 aa		11.16	□□□□□ -0.62
LRTOMT-204	ENST00000412777	LPIN2	Q92539	896 aa		11.16	□□□□□ -0.62
LRTOMT-204	ENST00000412777	SLC5A1	P13866	664 aa		11.15	□□□□□ -0.62
LRTOMT-204	ENST00000412777	MMP14	P50281	582 aa		11.15	□□□□□ -0.62
LRTOMT-204	ENST00000412777	FKBP1A	P62942	108 aa	Known RBP	11.15	□□□□□ -0.62
LRTOMT-204	ENST00000412777	HTRA3	P83110	453 aa		11.15	□□□□□ -0.62
LRTOMT-204	ENST00000412777	PDE3A	Q14432	1141 aa		11.15	□□□□□ -0.62
LRTOMT-204	ENST00000412777	ATP2B3	Q16720	1220 aa		11.15	□□□□□ -0.62
LRTOMT-204	ENST00000412777	CAVIN4	Q5BKX8	364 aa		11.15	□□□□□ -0.62
LRTOMT-204	ENST00000412777	RBM26	Q5T8P6	1007 aa	Known RBP	11.15	□□□□□ -0.62
LRTOMT-204	ENST00000412777	VPS37D	Q86XT2	251 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms