RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 RRP1P56182 461 aaKnown RBP16.42■□□□□ 0.22
HDAC8-210ENST00000412342 UBE4AQ14139 1066 aa16.42■□□□□ 0.22
HDAC8-210ENST00000412342 POLA2Q14181 598 aa16.42■□□□□ 0.22
HDAC8-210ENST00000412342 ZBTB40Q9NUA8 1239 aa16.42■□□□□ 0.22
HDAC8-210ENST00000412342 DDX19BQ9UMR2 479 aa16.42■□□□□ 0.22
HDAC8-210ENST00000412342 GJA3Q9Y6H8 435 aa16.42■□□□□ 0.22
HDAC8-210ENST00000412342 PSMD14O00487 310 aa16.41■□□□□ 0.22
HDAC8-210ENST00000412342 FGFR2P21802 821 aa16.41■□□□□ 0.22
HDAC8-210ENST00000412342 KCNJ4P48050 445 aa16.41■□□□□ 0.22
HDAC8-210ENST00000412342 ATP8B2P98198 1209 aa16.41■□□□□ 0.22
HDAC8-210ENST00000412342 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
HDAC8-210ENST00000412342 CEP85Q6P2H3 762 aa16.41■□□□□ 0.22
HDAC8-210ENST00000412342 PODNQ7Z5L7 613 aa16.41■□□□□ 0.22
HDAC8-210ENST00000412342 SSH3Q8TE77 659 aa16.41■□□□□ 0.22
HDAC8-210ENST00000412342 COA1Q9GZY4 146 aa16.41■□□□□ 0.22
HDAC8-210ENST00000412342 SIL1Q9H173 461 aa16.41■□□□□ 0.22
HDAC8-210ENST00000412342 TNIP1Q15025 636 aa16.4■□□□□ 0.22
HDAC8-210ENST00000412342 TAF1DQ9H5J8 278 aaPredicted RBP16.4■□□□□ 0.22
HDAC8-210ENST00000412342 IQCA1LA6NCM1 817 aa16.39■□□□□ 0.21
HDAC8-210ENST00000412342 VIL1P09327 827 aaKnown RBP16.39■□□□□ 0.21
HDAC8-210ENST00000412342 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.21
HDAC8-210ENST00000412342 GMPSP49915 693 aaPredicted RBP16.39■□□□□ 0.21
HDAC8-210ENST00000412342 CD209Q9NNX6 404 aa16.39■□□□□ 0.21
HDAC8-210ENST00000412342 HACL1Q9UJ83 578 aa16.39■□□□□ 0.21
HDAC8-210ENST00000412342 TOMM70O94826 608 aa16.38■□□□□ 0.21
HDAC8-210ENST00000412342 IL1R1P14778 569 aa16.38■□□□□ 0.21
HDAC8-210ENST00000412342 FAM84BQ96KN1 310 aaPredicted RBP16.38■□□□□ 0.21
HDAC8-210ENST00000412342 GPRC5DQ9NZD1 345 aa16.38■□□□□ 0.21
HDAC8-210ENST00000412342 ZBTB12Q9Y330 459 aaPredicted RBP16.38■□□□□ 0.21
HDAC8-210ENST00000412342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.38■□□□□ 0.21
HDAC8-210ENST00000412342 SHTN1A0MZ66 631 aa16.37■□□□□ 0.21
HDAC8-210ENST00000412342 POTEIP0CG38 1075 aa16.37■□□□□ 0.21
HDAC8-210ENST00000412342 POTEJP0CG39 1038 aa16.37■□□□□ 0.21
HDAC8-210ENST00000412342 EPHX2P34913 555 aa16.37■□□□□ 0.21
HDAC8-210ENST00000412342 EPS15P42566 896 aa16.37■□□□□ 0.21
HDAC8-210ENST00000412342 GYG1P46976 350 aa16.37■□□□□ 0.21
HDAC8-210ENST00000412342 PUM3Q15397 648 aaKnown RBP16.37■□□□□ 0.21
HDAC8-210ENST00000412342 DACT2Q5SW24 774 aa16.37■□□□□ 0.21
HDAC8-210ENST00000412342 RBM46Q8TBY0 533 aaKnown RBP16.37■□□□□ 0.21
HDAC8-210ENST00000412342 DPF2Q92785 391 aa16.37■□□□□ 0.21
HDAC8-210ENST00000412342 GMLQ99445 158 aa16.37■□□□□ 0.21
HDAC8-210ENST00000412342 MYH13Q9UKX3 1938 aa16.37■□□□□ 0.21
HDAC8-210ENST00000412342 USP17L3A6NCW0 530 aa16.36■□□□□ 0.21
HDAC8-210ENST00000412342 USP17L4A6NCW7 530 aa16.36■□□□□ 0.21
HDAC8-210ENST00000412342 G3V3G9 751 aa16.36■□□□□ 0.21
HDAC8-210ENST00000412342 RPS12P25398 132 aaKnown RBP16.36■□□□□ 0.21
HDAC8-210ENST00000412342 DCAF8Q5TAQ9 597 aa16.36■□□□□ 0.21
HDAC8-210ENST00000412342 RSBN1LQ6PCB5 846 aaPredicted RBP16.36■□□□□ 0.21
HDAC8-210ENST00000412342 USP17L1Q7RTZ2 530 aa16.36■□□□□ 0.21
HDAC8-210ENST00000412342 ZNF804AQ7Z570 1209 aa16.36■□□□□ 0.21
HDAC8-210ENST00000412342 FBXO33Q7Z6M2 555 aa16.36■□□□□ 0.21
HDAC8-210ENST00000412342 SIRT2Q8IXJ6 389 aa16.36■□□□□ 0.21
HDAC8-210ENST00000412342 NOP58Q9Y2X3 529 aaKnown RBP16.36■□□□□ 0.21
HDAC8-210ENST00000412342 SASH1O94885 1247 aa16.35■□□□□ 0.21
HDAC8-210ENST00000412342 C1QTNF8P60827 252 aa16.35■□□□□ 0.21
HDAC8-210ENST00000412342 STRIP1Q5VSL9 837 aa16.35■□□□□ 0.21
HDAC8-210ENST00000412342 TDRD7Q8NHU6 1098 aaKnown RBP16.35■□□□□ 0.21
HDAC8-210ENST00000412342 LPIN2Q92539 896 aa16.35■□□□□ 0.21
HDAC8-210ENST00000412342 MXD3Q9BW11 206 aa16.35■□□□□ 0.21
HDAC8-210ENST00000412342 CEP126Q9P2H0 1117 aa16.35■□□□□ 0.21
HDAC8-210ENST00000412342 LMOD1P29536 600 aaPredicted RBP16.34■□□□□ 0.21
HDAC8-210ENST00000412342 HIBADHP31937 336 aaKnown RBP16.34■□□□□ 0.21
HDAC8-210ENST00000412342 TFCP2Q12800 502 aa16.34■□□□□ 0.21
HDAC8-210ENST00000412342 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
HDAC8-210ENST00000412342 RPAP2Q8IXW5 612 aaPredicted RBP16.34■□□□□ 0.21
HDAC8-210ENST00000412342 AGBL3Q8NEM8 1001 aa16.34■□□□□ 0.21
HDAC8-210ENST00000412342 CHMP4BQ9H444 224 aaKnown RBP16.34■□□□□ 0.21
HDAC8-210ENST00000412342 CNOT7Q9UIV1 285 aaKnown RBP16.34■□□□□ 0.21
HDAC8-210ENST00000412342 IFIT1P09914 478 aaKnown RBP16.33■□□□□ 0.2
HDAC8-210ENST00000412342 GTF2IP78347 998 aa16.33■□□□□ 0.2
HDAC8-210ENST00000412342 MICALL2Q8IY33 904 aa16.33■□□□□ 0.2
HDAC8-210ENST00000412342 C16orf71Q8IYS4 520 aaPredicted RBP16.33■□□□□ 0.2
HDAC8-210ENST00000412342 CERS5Q8N5B7 392 aa16.33■□□□□ 0.2
HDAC8-210ENST00000412342 ADARB2Q9NS39 739 aaKnown RBP16.33■□□□□ 0.2
HDAC8-210ENST00000412342 FAM205AQ6ZU69 1335 aa16.33■□□□□ 0.2
HDAC8-210ENST00000412342 COL1A1P02452 1464 aaPredicted RBP16.33■□□□□ 0.2
HDAC8-210ENST00000412342 EGFRP00533 1210 aa16.32■□□□□ 0.2
HDAC8-210ENST00000412342 SLC5A1P13866 664 aa16.32■□□□□ 0.2
HDAC8-210ENST00000412342 BCAMP50895 628 aa16.32■□□□□ 0.2
HDAC8-210ENST00000412342 HIRAP54198 1017 aaPredicted RBP16.32■□□□□ 0.2
HDAC8-210ENST00000412342 ZNF280AP59817 542 aaPredicted RBP16.32■□□□□ 0.2
HDAC8-210ENST00000412342 TTLL5Q6EMB2 1281 aa16.32■□□□□ 0.2
HDAC8-210ENST00000412342 USP50Q70EL3 339 aaPredicted RBP16.32■□□□□ 0.2
HDAC8-210ENST00000412342 PNMA8AQ86V59 439 aaPredicted RBP16.32■□□□□ 0.2
HDAC8-210ENST00000412342 LDHDQ86WU2 507 aa16.32■□□□□ 0.2
HDAC8-210ENST00000412342 TRPM4Q8TD43 1214 aa16.32■□□□□ 0.2
HDAC8-210ENST00000412342 MYO3BQ8WXR4 1341 aa16.31■□□□□ 0.2
HDAC8-210ENST00000412342 ZBTB22O15209 634 aa16.31■□□□□ 0.2
HDAC8-210ENST00000412342 SURF6O75683 361 aaKnown RBP16.31■□□□□ 0.2
HDAC8-210ENST00000412342 ADORA1P30542 326 aa16.31■□□□□ 0.2
HDAC8-210ENST00000412342 G3BP1Q13283 466 aaKnown RBP eCLIP16.31■□□□□ 0.2
HDAC8-210ENST00000412342 SMC1BQ8NDV3 1235 aa16.31■□□□□ 0.2
HDAC8-210ENST00000412342 CRBNQ96SW2 442 aa16.31■□□□□ 0.2
HDAC8-210ENST00000412342 A0A1B0GUL7 405 aa16.3■□□□□ 0.2
HDAC8-210ENST00000412342 TIMM10P62072 90 aa16.3■□□□□ 0.2
HDAC8-210ENST00000412342 FKBP1AP62942 108 aaKnown RBP16.3■□□□□ 0.2
HDAC8-210ENST00000412342 FSTL1Q12841 308 aa16.3■□□□□ 0.2
HDAC8-210ENST00000412342 EAPPQ56P03 285 aaPredicted RBP16.3■□□□□ 0.2
HDAC8-210ENST00000412342 CAVIN4Q5BKX8 364 aa16.3■□□□□ 0.2
HDAC8-210ENST00000412342 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms