RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 PSME4Q14997 1843 aa20.28■□□□□ 0.84
DDR1-230ENST00000412274 ZKSCAN2Q63HK3 967 aa20.28■□□□□ 0.84
DDR1-230ENST00000412274 ZNF804AQ7Z570 1209 aa20.28■□□□□ 0.84
DDR1-230ENST00000412274 DNAJC5GQ8N7S2 189 aa20.28■□□□□ 0.84
DDR1-230ENST00000412274 KCNQ5Q9NR82 932 aa20.28■□□□□ 0.84
DDR1-230ENST00000412274 BCAR3O75815 825 aa20.27■□□□□ 0.84
DDR1-230ENST00000412274 MAP1SQ66K74 1059 aaPredicted RBP20.27■□□□□ 0.84
DDR1-230ENST00000412274 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.84
DDR1-230ENST00000412274 RIPOR2Q9Y4F9 1068 aa20.27■□□□□ 0.84
DDR1-230ENST00000412274 TMEM88BA6NKF7 163 aa20.26■□□□□ 0.83
DDR1-230ENST00000412274 TAF5LO75529 589 aa20.26■□□□□ 0.83
DDR1-230ENST00000412274 TRIM27P14373 513 aa20.26■□□□□ 0.83
DDR1-230ENST00000412274 KLRG1Q96E93 195 aa20.26■□□□□ 0.83
DDR1-230ENST00000412274 WTIPA6NIX2 430 aaPredicted RBP20.25■□□□□ 0.83
DDR1-230ENST00000412274 ZNF280AP59817 542 aaPredicted RBP20.25■□□□□ 0.83
DDR1-230ENST00000412274 TTLL5Q6EMB2 1281 aa20.25■□□□□ 0.83
DDR1-230ENST00000412274 CDC37L1Q7L3B6 337 aa20.25■□□□□ 0.83
DDR1-230ENST00000412274 TXNRD3Q86VQ6 643 aa20.25■□□□□ 0.83
DDR1-230ENST00000412274 OGFOD1Q8N543 542 aa20.25■□□□□ 0.83
DDR1-230ENST00000412274 HELBQ8NG08 1087 aaPredicted RBP20.25■□□□□ 0.83
DDR1-230ENST00000412274 CD209Q9NNX6 404 aa20.25■□□□□ 0.83
DDR1-230ENST00000412274 SCN9AQ15858 1988 aa20.25■□□□□ 0.83
DDR1-230ENST00000412274 PLIN1O60240 522 aa20.24■□□□□ 0.83
DDR1-230ENST00000412274 USP17L8P0C7I0 530 aa20.24■□□□□ 0.83
DDR1-230ENST00000412274 IL1R1P14778 569 aa20.24■□□□□ 0.83
DDR1-230ENST00000412274 DACT2Q5SW24 774 aa20.24■□□□□ 0.83
DDR1-230ENST00000412274 GMLQ99445 158 aa20.24■□□□□ 0.83
DDR1-230ENST00000412274 CEP350Q5VT06 3117 aa20.24■□□□□ 0.83
DDR1-230ENST00000412274 IRS2Q9Y4H2 1338 aa20.24■□□□□ 0.83
DDR1-230ENST00000412274 PDE8BO95263 885 aa20.23■□□□□ 0.83
DDR1-230ENST00000412274 HIRAP54198 1017 aaPredicted RBP20.23■□□□□ 0.83
DDR1-230ENST00000412274 FKBP1AP62942 108 aaKnown RBP20.23■□□□□ 0.83
DDR1-230ENST00000412274 METTL24Q5JXM2 366 aa20.23■□□□□ 0.83
DDR1-230ENST00000412274 A0A1B0GUL6 1792 aa20.23■□□□□ 0.83
DDR1-230ENST00000412274 CIAO1O76071 339 aa20.22■□□□□ 0.83
DDR1-230ENST00000412274 KIF4BQ2VIQ3 1234 aa20.22■□□□□ 0.83
DDR1-230ENST00000412274 SAMD7Q7Z3H4 446 aa20.22■□□□□ 0.83
DDR1-230ENST00000412274 TRPM4Q8TD43 1214 aa20.22■□□□□ 0.83
DDR1-230ENST00000412274 PUS3Q9BZE2 481 aaKnown RBP20.22■□□□□ 0.83
DDR1-230ENST00000412274 EYA2O00167 538 aa20.21■□□□□ 0.83
DDR1-230ENST00000412274 MS4A1P11836 297 aa20.21■□□□□ 0.83
DDR1-230ENST00000412274 RFX5P48382 616 aaPredicted RBP20.21■□□□□ 0.83
DDR1-230ENST00000412274 PTPN12Q05209 780 aaKnown RBP20.21■□□□□ 0.83
DDR1-230ENST00000412274 TBC1D10BQ4KMP7 808 aaPredicted RBP20.21■□□□□ 0.83
DDR1-230ENST00000412274 FTSJ3Q8IY81 847 aaKnown RBP20.21■□□□□ 0.83
DDR1-230ENST00000412274 DCPSQ96C86 337 aaKnown RBP20.21■□□□□ 0.83
DDR1-230ENST00000412274 MEIS3Q99687 375 aa20.21■□□□□ 0.83
DDR1-230ENST00000412274 HDAC9Q9UKV0 1011 aa20.21■□□□□ 0.83
DDR1-230ENST00000412274 LRRFIP2Q9Y608 721 aaKnown RBP20.21■□□□□ 0.83
DDR1-230ENST00000412274 SASH1O94885 1247 aa20.2■□□□□ 0.82
DDR1-230ENST00000412274 GNAI2P04899 355 aa20.2■□□□□ 0.82
DDR1-230ENST00000412274 KLRK1P26718 216 aa20.2■□□□□ 0.82
DDR1-230ENST00000412274 HIBADHP31937 336 aaKnown RBP20.2■□□□□ 0.82
DDR1-230ENST00000412274 GTF2IP78347 998 aa20.2■□□□□ 0.82
DDR1-230ENST00000412274 LRRC24Q50LG9 513 aa20.2■□□□□ 0.82
DDR1-230ENST00000412274 CAVIN4Q5BKX8 364 aa20.2■□□□□ 0.82
DDR1-230ENST00000412274 JMYQ8N9B5 988 aa20.2■□□□□ 0.82
DDR1-230ENST00000412274 FBXW7Q969H0 707 aa20.2■□□□□ 0.82
DDR1-230ENST00000412274 MYOZ2Q9NPC6 264 aa20.2■□□□□ 0.82
DDR1-230ENST00000412274 HTRA3P83110 453 aa20.19■□□□□ 0.82
DDR1-230ENST00000412274 MTX1Q13505 466 aa20.19■□□□□ 0.82
DDR1-230ENST00000412274 PUM3Q15397 648 aaKnown RBP20.19■□□□□ 0.82
DDR1-230ENST00000412274 VPS37DQ86XT2 251 aa20.19■□□□□ 0.82
DDR1-230ENST00000412274 VGLL2Q8N8G2 317 aa20.19■□□□□ 0.82
DDR1-230ENST00000412274 SHTN1A0MZ66 631 aa20.18■□□□□ 0.82
DDR1-230ENST00000412274 SNAP23O00161 211 aa20.18■□□□□ 0.82
DDR1-230ENST00000412274 IFIT1P09914 478 aaKnown RBP20.18■□□□□ 0.82
DDR1-230ENST00000412274 RBM26Q5T8P6 1007 aaKnown RBP20.18■□□□□ 0.82
DDR1-230ENST00000412274 DZIP1LQ8IYY4 767 aaKnown RBP20.18■□□□□ 0.82
DDR1-230ENST00000412274 COPRSQ9NQ92 184 aa20.18■□□□□ 0.82
DDR1-230ENST00000412274 PITPNM2Q9BZ72 1349 aa20.18■□□□□ 0.82
DDR1-230ENST00000412274 IL15P40933 162 aaPredicted RBP20.17■□□□□ 0.82
DDR1-230ENST00000412274 TDRD7Q8NHU6 1098 aaKnown RBP20.17■□□□□ 0.82
DDR1-230ENST00000412274 CLUAP1Q96AJ1 413 aa20.17■□□□□ 0.82
DDR1-230ENST00000412274 FAM84BQ96KN1 310 aaPredicted RBP20.17■□□□□ 0.82
DDR1-230ENST00000412274 CEP126Q9P2H0 1117 aa20.17■□□□□ 0.82
DDR1-230ENST00000412274 FAM205AQ6ZU69 1335 aa20.17■□□□□ 0.82
DDR1-230ENST00000412274 TRPM7Q96QT4 1865 aa20.16■□□□□ 0.82
DDR1-230ENST00000412274 KRT26Q7Z3Y9 468 aa20.16■□□□□ 0.82
DDR1-230ENST00000412274 FBXO33Q7Z6M2 555 aa20.16■□□□□ 0.82
DDR1-230ENST00000412274 SULF1Q8IWU6 871 aa20.16■□□□□ 0.82
DDR1-230ENST00000412274 KLHDC4Q8TBB5 520 aa20.16■□□□□ 0.82
DDR1-230ENST00000412274 LPIN2Q92539 896 aa20.16■□□□□ 0.82
DDR1-230ENST00000412274 CNTNAP1P78357 1384 aa20.16■□□□□ 0.82
DDR1-230ENST00000412274 RASSF10A6NK89 507 aa20.15■□□□□ 0.82
DDR1-230ENST00000412274 SRGAP3O43295 1099 aa20.15■□□□□ 0.82
DDR1-230ENST00000412274 SLC5A1P13866 664 aa20.15■□□□□ 0.82
DDR1-230ENST00000412274 SCARF1Q14162 830 aa20.15■□□□□ 0.82
DDR1-230ENST00000412274 DEFB115Q30KQ5 88 aa20.15■□□□□ 0.82
DDR1-230ENST00000412274 TMEM57Q8N5G2 664 aa20.15■□□□□ 0.82
DDR1-230ENST00000412274 GLIS2Q9BZE0 524 aaPredicted RBP20.15■□□□□ 0.82
DDR1-230ENST00000412274 ABT1Q9ULW3 272 aaKnown RBP20.15■□□□□ 0.82
DDR1-230ENST00000412274 ZNF646O15015 1829 aaPredicted RBP20.14■□□□□ 0.81
DDR1-230ENST00000412274 EGFRP00533 1210 aa20.14■□□□□ 0.81
DDR1-230ENST00000412274 FGFR2P21802 821 aa20.14■□□□□ 0.81
DDR1-230ENST00000412274 ATG9AQ7Z3C6 839 aa20.14■□□□□ 0.81
DDR1-230ENST00000412274 USP48Q86UV5 1035 aa20.14■□□□□ 0.81
DDR1-230ENST00000412274 TBC1D22AQ8WUA7 517 aa20.14■□□□□ 0.81
DDR1-230ENST00000412274 HHIPL1Q96JK4 782 aa20.14■□□□□ 0.81
DDR1-230ENST00000412274 TRAF5O00463 557 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms