RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 CELF2O95319 508 aaKnown RBP12.84□□□□□ -0.35
LINC01643-201ENST00000412218 KLRK1P26718 216 aa12.84□□□□□ -0.35
LINC01643-201ENST00000412218 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
LINC01643-201ENST00000412218 LMBR1LQ6UX01 489 aa12.84□□□□□ -0.35
LINC01643-201ENST00000412218 USP17L1Q7RTZ2 530 aa12.84□□□□□ -0.35
LINC01643-201ENST00000412218 TXNRD3Q86VQ6 643 aa12.84□□□□□ -0.35
LINC01643-201ENST00000412218 TRMT2AQ8IZ69 625 aaKnown RBP12.84□□□□□ -0.35
LINC01643-201ENST00000412218 GMLQ99445 158 aa12.84□□□□□ -0.35
LINC01643-201ENST00000412218 COA1Q9GZY4 146 aa12.84□□□□□ -0.35
LINC01643-201ENST00000412218 CHMP3Q9Y3E7 222 aa12.84□□□□□ -0.35
LINC01643-201ENST00000412218 TLL2Q9Y6L7 1015 aa12.84□□□□□ -0.35
LINC01643-201ENST00000412218 UTYO14607 1347 aa12.84□□□□□ -0.35
LINC01643-201ENST00000412218 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.35
LINC01643-201ENST00000412218 RBM26Q5T8P6 1007 aaKnown RBP12.83□□□□□ -0.36
LINC01643-201ENST00000412218 SUCLG2Q96I99 432 aa12.83□□□□□ -0.36
LINC01643-201ENST00000412218 WDR33Q9C0J8 1336 aaKnown RBP12.83□□□□□ -0.36
LINC01643-201ENST00000412218 IRS2Q9Y4H2 1338 aa12.83□□□□□ -0.36
LINC01643-201ENST00000412218 A0A1B0GUL6 1792 aa12.82□□□□□ -0.36
LINC01643-201ENST00000412218 NBPF7P0C2Y1 421 aaPredicted RBP12.82□□□□□ -0.36
LINC01643-201ENST00000412218 KCNJ4P48050 445 aa12.82□□□□□ -0.36
LINC01643-201ENST00000412218 ALDH1L2Q3SY69 923 aa12.82□□□□□ -0.36
LINC01643-201ENST00000412218 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
LINC01643-201ENST00000412218 COL13A1Q5TAT6 717 aaPredicted RBP12.82□□□□□ -0.36
LINC01643-201ENST00000412218 USP48Q86UV5 1035 aa12.82□□□□□ -0.36
LINC01643-201ENST00000412218 KAZALD1Q96I82 304 aa12.82□□□□□ -0.36
LINC01643-201ENST00000412218 GGA3Q9NZ52 723 aa12.82□□□□□ -0.36
LINC01643-201ENST00000412218 TRPM7Q96QT4 1865 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 ADM5C9JUS6 153 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 TAF5LO75529 589 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 USP17L8P0C7I0 530 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 CCDC57Q2TAC2 916 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 STRIP1Q5VSL9 837 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 DLK2Q6UY11 383 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 C15orf52Q6ZUT6 534 aaKnown RBP12.81□□□□□ -0.36
LINC01643-201ENST00000412218 KRT26Q7Z3Y9 468 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 SAPCD2Q86UD0 394 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 DCPSQ96C86 337 aaKnown RBP12.81□□□□□ -0.36
LINC01643-201ENST00000412218 ZNF594Q96JF6 807 aaPredicted RBP12.81□□□□□ -0.36
LINC01643-201ENST00000412218 CAPNS2Q96L46 248 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 ZNF408Q9H9D4 720 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 MYOZ2Q9NPC6 264 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 ASTN2O75129 1339 aaPredicted RBP12.81□□□□□ -0.36
LINC01643-201ENST00000412218 MYO3BQ8WXR4 1341 aa12.81□□□□□ -0.36
LINC01643-201ENST00000412218 SNAP23O00161 211 aa12.8□□□□□ -0.36
LINC01643-201ENST00000412218 FOXN1O15353 648 aa12.8□□□□□ -0.36
LINC01643-201ENST00000412218 CT47B1P0C2W7 299 aaPredicted RBP12.8□□□□□ -0.36
LINC01643-201ENST00000412218 ECE1P42892 770 aa12.8□□□□□ -0.36
LINC01643-201ENST00000412218 RABL6Q3YEC7 729 aaPredicted RBP12.8□□□□□ -0.36
LINC01643-201ENST00000412218 TAF7LQ5H9L4 462 aa12.8□□□□□ -0.36
LINC01643-201ENST00000412218 CYP4F22Q6NT55 531 aa12.8□□□□□ -0.36
LINC01643-201ENST00000412218 PAXIP1Q6ZW49 1069 aaPredicted RBP12.8□□□□□ -0.36
LINC01643-201ENST00000412218 HELBQ8NG08 1087 aaPredicted RBP12.8□□□□□ -0.36
LINC01643-201ENST00000412218 FBXW7Q969H0 707 aa12.8□□□□□ -0.36
LINC01643-201ENST00000412218 HHIPL1Q96JK4 782 aa12.8□□□□□ -0.36
LINC01643-201ENST00000412218 MXD3Q9BW11 206 aa12.8□□□□□ -0.36
LINC01643-201ENST00000412218 SMC4Q9NTJ3 1288 aa12.8□□□□□ -0.36
LINC01643-201ENST00000412218 WBP1LQ9NX94 342 aa12.8□□□□□ -0.36
LINC01643-201ENST00000412218 SCARF1Q14162 830 aa12.79□□□□□ -0.36
LINC01643-201ENST00000412218 ANGEL2Q5VTE6 544 aaKnown RBP12.79□□□□□ -0.36
LINC01643-201ENST00000412218 LDHAL6AQ6ZMR3 332 aa12.79□□□□□ -0.36
LINC01643-201ENST00000412218 SULF1Q8IWU6 871 aa12.79□□□□□ -0.36
LINC01643-201ENST00000412218 ANKRD44Q8N8A2 993 aa12.79□□□□□ -0.36
LINC01643-201ENST00000412218 BICC1Q9H694 974 aaKnown RBP12.79□□□□□ -0.36
LINC01643-201ENST00000412218 CD209Q9NNX6 404 aa12.79□□□□□ -0.36
LINC01643-201ENST00000412218 CNNM1Q9NRU3 951 aa12.79□□□□□ -0.36
LINC01643-201ENST00000412218 TTLL5Q6EMB2 1281 aa12.78□□□□□ -0.36
LINC01643-201ENST00000412218 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
LINC01643-201ENST00000412218 PITPNM2Q9BZ72 1349 aa12.78□□□□□ -0.36
LINC01643-201ENST00000412218 MMP14P50281 582 aa12.77□□□□□ -0.37
LINC01643-201ENST00000412218 GTF2IP78347 998 aa12.77□□□□□ -0.37
LINC01643-201ENST00000412218 MAP2K1Q02750 393 aaPredicted RBP12.77□□□□□ -0.37
LINC01643-201ENST00000412218 GRM1Q13255 1194 aa12.77□□□□□ -0.37
LINC01643-201ENST00000412218 ZNF804AQ7Z570 1209 aa12.77□□□□□ -0.37
LINC01643-201ENST00000412218 OGFOD1Q8N543 542 aa12.77□□□□□ -0.37
LINC01643-201ENST00000412218 USP44Q9H0E7 712 aa12.77□□□□□ -0.37
LINC01643-201ENST00000412218 PLIN1O60240 522 aa12.76□□□□□ -0.37
LINC01643-201ENST00000412218 AOC2O75106 756 aa12.76□□□□□ -0.37
LINC01643-201ENST00000412218 IL1R1P14778 569 aa12.76□□□□□ -0.37
LINC01643-201ENST00000412218 CTCFP49711 727 aaPredicted RBP12.76□□□□□ -0.37
LINC01643-201ENST00000412218 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
LINC01643-201ENST00000412218 NBPF9Q3BBW0 867 aa12.76□□□□□ -0.37
LINC01643-201ENST00000412218 CDCA5Q96FF9 252 aa12.76□□□□□ -0.37
LINC01643-201ENST00000412218 PUS3Q9BZE2 481 aaKnown RBP12.76□□□□□ -0.37
LINC01643-201ENST00000412218 GBA2Q9HCG7 927 aaPredicted RBP12.76□□□□□ -0.37
LINC01643-201ENST00000412218 PCNTO95613 3336 aa12.76□□□□□ -0.37
LINC01643-201ENST00000412218 WNT10BO00744 389 aa12.75□□□□□ -0.37
LINC01643-201ENST00000412218 MAP2K2P36507 400 aa12.75□□□□□ -0.37
LINC01643-201ENST00000412218 HUNKP57058 714 aa12.75□□□□□ -0.37
LINC01643-201ENST00000412218 UBE4AQ14139 1066 aa12.75□□□□□ -0.37
LINC01643-201ENST00000412218 MROH5Q6ZUA9 1318 aa12.75□□□□□ -0.37
LINC01643-201ENST00000412218 KIAA0825Q8IV33 1275 aa12.75□□□□□ -0.37
LINC01643-201ENST00000412218 TNS4Q8IZW8 715 aa12.75□□□□□ -0.37
LINC01643-201ENST00000412218 CERS5Q8N5B7 392 aa12.75□□□□□ -0.37
LINC01643-201ENST00000412218 C2orf69Q8N8R5 385 aa12.75□□□□□ -0.37
LINC01643-201ENST00000412218 PRDM10Q9NQV6 1147 aa12.75□□□□□ -0.37
LINC01643-201ENST00000412218 NOB1Q9ULX3 412 aaKnown RBP12.75□□□□□ -0.37
LINC01643-201ENST00000412218 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
LINC01643-201ENST00000412218 SASH1O94885 1247 aa12.74□□□□□ -0.37
LINC01643-201ENST00000412218 HSPA8P11142 646 aaKnown RBP12.74□□□□□ -0.37
LINC01643-201ENST00000412218 RARSP54136 660 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms