RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 NFE2L2Q16236 605 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 CEP57Q86XR8 500 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 CNPY4Q8N129 248 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 UBL4BQ8N7F7 174 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 TTC21BQ7Z4L5 1316 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 IDH1O75874 414 aaKnown RBP8.33□□□□□ -1.08
PTPN3-203ENST00000412145 UBASH3AP57075 661 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 ZC3H6P61129 1189 aaKnown RBP8.33□□□□□ -1.08
PTPN3-203ENST00000412145 ATP2A3Q93084 1043 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 TPCN1Q9ULQ1 816 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 ATP6V0A2Q9Y487 856 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 SNAPC4Q5SXM2 1469 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 RALGAPBQ86X10 1494 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 CRCPO75575 148 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 GNAT2P19087 354 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 IFIT5Q13325 482 aaKnown RBP8.33□□□□□ -1.08
PTPN3-203ENST00000412145 IL16Q14005 1332 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 SYKP43405 635 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 SMAP1Q8IYB5 467 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-203ENST00000412145 DRC3Q9H069 523 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 NUCKS1Q9H1E3 243 aaKnown RBP8.33□□□□□ -1.08
PTPN3-203ENST00000412145 RTEL1-TNFRSF6BF6WH68 1400 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 EVI5O60447 810 aa8.33□□□□□ -1.08
PTPN3-203ENST00000412145 ARL1P40616 181 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-203ENST00000412145 LRPPRCP42704 1394 aaKnown RBP8.33□□□□□ -1.08
PTPN3-203ENST00000412145 GOLGA6CA6NDK9 693 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 GOLGA6BA6NDN3 693 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 GOLGA6DP0CG33 693 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 CDC5LQ99459 802 aaKnown RBP8.32□□□□□ -1.08
PTPN3-203ENST00000412145 KAT14Q9H8E8 782 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 GOLGA6AQ9NYA3 693 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 SH3BP5O60239 455 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 STAT6P42226 847 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 HS2ST1Q7LGA3 356 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 BRAPQ7Z569 592 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 MICALL1Q8N3F8 863 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 P3H4Q92791 437 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 CCDC42Q96M95 316 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 CDK19Q9BWU1 502 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 SLC8A1P32418 973 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 PCK1P35558 622 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 TRIML1Q8N9V2 468 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.32□□□□□ -1.08
PTPN3-203ENST00000412145 CEBPAP49715 358 aaPredicted RBP8.32□□□□□ -1.08
PTPN3-203ENST00000412145 MCUR1Q96AQ8 359 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 TTF2Q9UNY4 1162 aaKnown RBP8.32□□□□□ -1.08
PTPN3-203ENST00000412145 PLCG2P16885 1265 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 SATB1Q01826 763 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 ARMC9Q7Z3E5 817 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 PUS7Q96PZ0 661 aaKnown RBP8.32□□□□□ -1.08
PTPN3-203ENST00000412145 TSPYL2Q9H2G4 693 aaPredicted RBP8.32□□□□□ -1.08
PTPN3-203ENST00000412145 FAM8A1Q9UBU6 413 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 SYCE1Q8N0S2 351 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 EPSTI1Q96J88 318 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 MAK16Q9BXY0 300 aaKnown RBP8.32□□□□□ -1.08
PTPN3-203ENST00000412145 C6orf50Q9HD87 102 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 CAMK4Q16566 473 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 CEP85LQ5SZL2 805 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 MFSD6Q6ZSS7 791 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 FCHSD1Q86WN1 690 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 IFT20Q8IY31 132 aa8.32□□□□□ -1.08
PTPN3-203ENST00000412145 TNPO1Q92973 898 aaKnown RBP8.32□□□□□ -1.08
PTPN3-203ENST00000412145 PDCD2Q16342 344 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-203ENST00000412145 MUM1L1Q5H9M0 696 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 PAXIP1Q6ZW49 1069 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-203ENST00000412145 NEK11Q8NG66 645 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 MRPS27Q92552 414 aaKnown RBP8.31□□□□□ -1.08
PTPN3-203ENST00000412145 SPC25Q9HBM1 224 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 SOS1Q07889 1333 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-203ENST00000412145 GOLGA8CPA6NN73 597 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 MCM6Q14566 821 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 PODNQ7Z5L7 613 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 PPP1R12CQ9BZL4 782 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 ZPR1O75312 459 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 SKILP12757 684 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 METAP2P50579 478 aaKnown RBP eCLIP8.31□□□□□ -1.08
PTPN3-203ENST00000412145 NOX5Q96PH1 765 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 CRNKL1Q9BZJ0 848 aaKnown RBP8.31□□□□□ -1.08
PTPN3-203ENST00000412145 FAM135AQ9P2D6 1515 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 IFIT3O14879 490 aaKnown RBP8.31□□□□□ -1.08
PTPN3-203ENST00000412145 DKC1O60832 514 aaKnown RBP eCLIP8.31□□□□□ -1.08
PTPN3-203ENST00000412145 TRIM37O94972 964 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 RFC1P35251 1148 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-203ENST00000412145 NAA25Q14CX7 972 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 PPP1R7Q15435 360 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 AFAP1L1Q8TED9 768 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 ERCC5P28715 1186 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-203ENST00000412145 NBPF6Q5VWK0 638 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 RSPH3Q86UC2 560 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 NBPF4Q96M43 638 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 EPRSP07814 1512 aaKnown RBP8.31□□□□□ -1.08
PTPN3-203ENST00000412145 MIER3Q7Z3K6 550 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 NUP58Q9BVL2 599 aa8.31□□□□□ -1.08
PTPN3-203ENST00000412145 PHACTR2O75167 634 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 LIN9Q5TKA1 542 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 RAB11FIP4Q86YS3 637 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 CCDC89Q8N998 374 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 SMARCC2Q8TAQ2 1214 aa8.3□□□□□ -1.08
PTPN3-203ENST00000412145 UTP11Q9Y3A2 253 aaKnown RBP8.3□□□□□ -1.08
PTPN3-203ENST00000412145 CCDC124Q96CT7 223 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms