RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 LEMD3Q9Y2U8 911 aa28.34■■■□□ 2.13
MSH6-202ENST00000411819 ZNF521Q96K83 1311 aa28.34■■■□□ 2.13
MSH6-202ENST00000411819 KCNJ4P48050 445 aa28.33■■■□□ 2.13
MSH6-202ENST00000411819 SLC4A10Q6U841 1118 aa28.33■■■□□ 2.13
MSH6-202ENST00000411819 BEGAINQ9BUH8 593 aa28.33■■■□□ 2.13
MSH6-202ENST00000411819 PRDM10Q9NQV6 1147 aa28.33■■■□□ 2.13
MSH6-202ENST00000411819 ZNF804BA4D1E1 1349 aa28.33■■■□□ 2.13
MSH6-202ENST00000411819 AOC2O75106 756 aa28.32■■■□□ 2.12
MSH6-202ENST00000411819 USP17L8P0C7I0 530 aa28.32■■■□□ 2.12
MSH6-202ENST00000411819 LBX1P52954 281 aa28.32■■■□□ 2.12
MSH6-202ENST00000411819 ZNF280AP59817 542 aaPredicted RBP28.32■■■□□ 2.12
MSH6-202ENST00000411819 IFIT5Q13325 482 aaKnown RBP28.32■■■□□ 2.12
MSH6-202ENST00000411819 SULF1Q8IWU6 871 aa28.32■■■□□ 2.12
MSH6-202ENST00000411819 ASTN2O75129 1339 aaPredicted RBP28.32■■■□□ 2.12
MSH6-202ENST00000411819 A0A1B0GUL6 1792 aa28.32■■■□□ 2.12
MSH6-202ENST00000411819 ZNF646O15015 1829 aaPredicted RBP28.32■■■□□ 2.12
MSH6-202ENST00000411819 CHRNDQ07001 517 aa28.31■■■□□ 2.12
MSH6-202ENST00000411819 TXNRD3Q86VQ6 643 aa28.31■■■□□ 2.12
MSH6-202ENST00000411819 HHIPL1Q96JK4 782 aa28.31■■■□□ 2.12
MSH6-202ENST00000411819 COA1Q9GZY4 146 aa28.31■■■□□ 2.12
MSH6-202ENST00000411819 GRM8O00222 908 aa28.3■■■□□ 2.12
MSH6-202ENST00000411819 KLRK1P26718 216 aa28.3■■■□□ 2.12
MSH6-202ENST00000411819 HUNKP57058 714 aa28.3■■■□□ 2.12
MSH6-202ENST00000411819 FOXO4P98177 505 aa28.3■■■□□ 2.12
MSH6-202ENST00000411819 GMLQ99445 158 aa28.3■■■□□ 2.12
MSH6-202ENST00000411819 MYOZ2Q9NPC6 264 aa28.3■■■□□ 2.12
MSH6-202ENST00000411819 C9orf78Q9NZ63 289 aaPredicted RBP28.3■■■□□ 2.12
MSH6-202ENST00000411819 HSPA8P11142 646 aaKnown RBP28.29■■■□□ 2.12
MSH6-202ENST00000411819 SCARF1Q14162 830 aa28.29■■■□□ 2.12
MSH6-202ENST00000411819 ANGEL2Q5VTE6 544 aaKnown RBP28.29■■■□□ 2.12
MSH6-202ENST00000411819 SRCIN1Q9C0H9 1055 aa28.29■■■□□ 2.12
MSH6-202ENST00000411819 GBA2Q9HCG7 927 aaPredicted RBP28.29■■■□□ 2.12
MSH6-202ENST00000411819 MAP2K2P36507 400 aa28.28■■■□□ 2.12
MSH6-202ENST00000411819 LMBR1LQ6UX01 489 aa28.28■■■□□ 2.12
MSH6-202ENST00000411819 MXD3Q9BW11 206 aa28.28■■■□□ 2.12
MSH6-202ENST00000411819 ALDH1L1O75891 902 aa28.27■■■□□ 2.12
MSH6-202ENST00000411819 TAF7LQ5H9L4 462 aa28.27■■■□□ 2.12
MSH6-202ENST00000411819 DACT2Q5SW24 774 aa28.27■■■□□ 2.12
MSH6-202ENST00000411819 C2orf69Q8N8R5 385 aa28.27■■■□□ 2.12
MSH6-202ENST00000411819 MYO3BQ8WXR4 1341 aa28.26■■■□□ 2.11
MSH6-202ENST00000411819 CCDC57Q2TAC2 916 aa28.26■■■□□ 2.11
MSH6-202ENST00000411819 EPHA10Q5JZY3 1008 aa28.26■■■□□ 2.11
MSH6-202ENST00000411819 STRIP1Q5VSL9 837 aa28.26■■■□□ 2.11
MSH6-202ENST00000411819 HELBQ8NG08 1087 aaPredicted RBP28.26■■■□□ 2.11
MSH6-202ENST00000411819 E9PSI1 815 aa28.25■■■□□ 2.11
MSH6-202ENST00000411819 TAF5LO75529 589 aa28.25■■■□□ 2.11
MSH6-202ENST00000411819 OGFOD1Q8N543 542 aa28.25■■■□□ 2.11
MSH6-202ENST00000411819 CDCA5Q96FF9 252 aa28.24■■■□□ 2.11
MSH6-202ENST00000411819 SNAP23O00161 211 aa28.23■■■□□ 2.11
MSH6-202ENST00000411819 ZNF594Q96JF6 807 aaPredicted RBP28.23■■■□□ 2.11
MSH6-202ENST00000411819 TTLL5Q6EMB2 1281 aa28.22■■■□□ 2.11
MSH6-202ENST00000411819 PITPNM2Q9BZ72 1349 aa28.21■■■□□ 2.11
MSH6-202ENST00000411819 GTF2IP78347 998 aa28.21■■■□□ 2.11
MSH6-202ENST00000411819 NOGQ13253 232 aa28.21■■■□□ 2.11
MSH6-202ENST00000411819 RGMBQ6NW40 437 aa28.21■■■□□ 2.11
MSH6-202ENST00000411819 LDHAL6AQ6ZMR3 332 aa28.21■■■□□ 2.11
MSH6-202ENST00000411819 MRPL50Q8N5N7 158 aaKnown RBP28.21■■■□□ 2.11
MSH6-202ENST00000411819 CNNM1Q9NRU3 951 aa28.21■■■□□ 2.11
MSH6-202ENST00000411819 TSKSQ9UJT2 592 aa28.21■■■□□ 2.11
MSH6-202ENST00000411819 PLIN1O60240 522 aa28.2■■■□□ 2.1
MSH6-202ENST00000411819 BRPF1P55201 1214 aaPredicted RBP28.2■■■□□ 2.1
MSH6-202ENST00000411819 NBPF9Q3BBW0 867 aa28.2■■■□□ 2.1
MSH6-202ENST00000411819 SUCLG2Q96I99 432 aa28.2■■■□□ 2.1
MSH6-202ENST00000411819 SCAF8Q9UPN6 1271 aaKnown RBP28.2■■■□□ 2.1
MSH6-202ENST00000411819 KIAA0825Q8IV33 1275 aa28.19■■■□□ 2.1
MSH6-202ENST00000411819 CD209Q9NNX6 404 aa28.19■■■□□ 2.1
MSH6-202ENST00000411819 ZNF804AQ7Z570 1209 aa28.18■■■□□ 2.1
MSH6-202ENST00000411819 HDAC9Q9UKV0 1011 aa28.18■■■□□ 2.1
MSH6-202ENST00000411819 PAPPA2Q9BXP8 1791 aa28.17■■■□□ 2.1
MSH6-202ENST00000411819 SASH1O94885 1247 aa28.17■■■□□ 2.1
MSH6-202ENST00000411819 NBPF7P0C2Y1 421 aaPredicted RBP28.17■■■□□ 2.1
MSH6-202ENST00000411819 ZNF157P51786 506 aaPredicted RBP28.17■■■□□ 2.1
MSH6-202ENST00000411819 SLFN5Q08AF3 891 aa28.17■■■□□ 2.1
MSH6-202ENST00000411819 PTPRCP08575 1304 aa28.17■■■□□ 2.1
MSH6-202ENST00000411819 IRS2Q9Y4H2 1338 aa28.17■■■□□ 2.1
MSH6-202ENST00000411819 WNT10BO00744 389 aa28.16■■■□□ 2.1
MSH6-202ENST00000411819 CA12O43570 354 aa28.16■■■□□ 2.1
MSH6-202ENST00000411819 C15orf52Q6ZUT6 534 aaKnown RBP28.16■■■□□ 2.1
MSH6-202ENST00000411819 SSH1Q8WYL5 1049 aa28.16■■■□□ 2.1
MSH6-202ENST00000411819 ZIC5Q96T25 663 aa28.16■■■□□ 2.1
MSH6-202ENST00000411819 CCDC102AQ96A19 550 aa28.15■■■□□ 2.1
MSH6-202ENST00000411819 FAM155AB1AL88 458 aaPredicted RBP28.14■■■□□ 2.1
MSH6-202ENST00000411819 CDCA7LQ96GN5 454 aa28.14■■■□□ 2.1
MSH6-202ENST00000411819 KAZALD1Q96I82 304 aa28.14■■■□□ 2.1
MSH6-202ENST00000411819 MMP14P50281 582 aa28.13■■■□□ 2.09
MSH6-202ENST00000411819 BICC1Q9H694 974 aaKnown RBP28.13■■■□□ 2.09
MSH6-202ENST00000411819 UTYO14607 1347 aa28.13■■■□□ 2.09
MSH6-202ENST00000411819 PRAMEF18Q5VWM3 479 aa28.12■■■□□ 2.09
MSH6-202ENST00000411819 SLC10A3P09131 477 aa28.11■■■□□ 2.09
MSH6-202ENST00000411819 IL1R1P14778 569 aa28.11■■■□□ 2.09
MSH6-202ENST00000411819 FKBP1BP68106 108 aa28.11■■■□□ 2.09
MSH6-202ENST00000411819 PUS3Q9BZE2 481 aaKnown RBP28.11■■■□□ 2.09
MSH6-202ENST00000411819 SMC4Q9NTJ3 1288 aa28.11■■■□□ 2.09
MSH6-202ENST00000411819 JAG2Q9Y219 1238 aa28.11■■■□□ 2.09
MSH6-202ENST00000411819 F8W031 263 aaPredicted RBP28.1■■■□□ 2.09
MSH6-202ENST00000411819 KIF23Q02241 960 aaPredicted RBP28.1■■■□□ 2.09
MSH6-202ENST00000411819 TTLL12Q14166 644 aaPredicted RBP28.1■■■□□ 2.09
MSH6-202ENST00000411819 CERS5Q8N5B7 392 aa28.1■■■□□ 2.09
MSH6-202ENST00000411819 NF2P35240 595 aa28.09■■■□□ 2.09
MSH6-202ENST00000411819 APOBEC3FQ8IUX4 373 aaKnown RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms