RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 LPIN2Q92539 896 aa17.71■□□□□ 0.43
LIMS2-209ENST00000410038 EYA3Q99504 573 aa17.71■□□□□ 0.43
LIMS2-209ENST00000410038 IL1RAPL2Q9NP60 686 aa17.71■□□□□ 0.43
LIMS2-209ENST00000410038 GPR108Q9NPR9 543 aa17.71■□□□□ 0.43
LIMS2-209ENST00000410038 AKAP2Q9Y2D5 859 aa17.71■□□□□ 0.43
LIMS2-209ENST00000410038 ZNF609O15014 1411 aa17.71■□□□□ 0.43
LIMS2-209ENST00000410038 RIMBP2O15034 1052 aa17.71■□□□□ 0.42
LIMS2-209ENST00000410038 IARSP41252 1262 aaKnown RBP17.71■□□□□ 0.42
LIMS2-209ENST00000410038 TIMM10P62072 90 aa17.71■□□□□ 0.42
LIMS2-209ENST00000410038 KIAA2012Q0VF49 1180 aa17.71■□□□□ 0.42
LIMS2-209ENST00000410038 AOC3Q16853 763 aa17.71■□□□□ 0.42
LIMS2-209ENST00000410038 LRRCC1Q9C099 1032 aa17.71■□□□□ 0.42
LIMS2-209ENST00000410038 COL4A5P29400 1685 aa17.7■□□□□ 0.42
LIMS2-209ENST00000410038 A0A1B0GUL7 405 aa17.7■□□□□ 0.42
LIMS2-209ENST00000410038 PPIP5K2O43314 1243 aa17.7■□□□□ 0.42
LIMS2-209ENST00000410038 TNNI3KQ59H18 835 aa17.7■□□□□ 0.42
LIMS2-209ENST00000410038 C15orf52Q6ZUT6 534 aaKnown RBP17.7■□□□□ 0.42
LIMS2-209ENST00000410038 ZC3H12CQ9C0D7 883 aaKnown RBP17.7■□□□□ 0.42
LIMS2-209ENST00000410038 VPS33BQ9H267 617 aa17.7■□□□□ 0.42
LIMS2-209ENST00000410038 FPGT-TNNI3KV9GXZ4 949 aa17.7■□□□□ 0.42
LIMS2-209ENST00000410038 SMARCA5O60264 1052 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-209ENST00000410038 IFIT1P09914 478 aaKnown RBP17.69■□□□□ 0.42
LIMS2-209ENST00000410038 SLC5A1P13866 664 aa17.69■□□□□ 0.42
LIMS2-209ENST00000410038 LMNB1P20700 586 aa17.69■□□□□ 0.42
LIMS2-209ENST00000410038 EAF2Q96CJ1 260 aaPredicted RBP17.69■□□□□ 0.42
LIMS2-209ENST00000410038 LARGE2Q8N3Y3 721 aa17.68■□□□□ 0.42
LIMS2-209ENST00000410038 CLASRPQ8N2M8 674 aaKnown RBP17.67■□□□□ 0.42
LIMS2-209ENST00000410038 CCDC136Q96JN2 1154 aa17.67■□□□□ 0.42
LIMS2-209ENST00000410038 FAM84BQ96KN1 310 aaPredicted RBP17.67■□□□□ 0.42
LIMS2-209ENST00000410038 NEUROD6Q96NK8 337 aa17.67■□□□□ 0.42
LIMS2-209ENST00000410038 PPP4R2Q9NY27 417 aa17.67■□□□□ 0.42
LIMS2-209ENST00000410038 TIAM2Q8IVF5 1701 aa17.67■□□□□ 0.42
LIMS2-209ENST00000410038 MYH13Q9UKX3 1938 aa17.67■□□□□ 0.42
LIMS2-209ENST00000410038 SCN9AQ15858 1988 aa17.67■□□□□ 0.42
LIMS2-209ENST00000410038 HSPA6P17066 643 aa17.67■□□□□ 0.42
LIMS2-209ENST00000410038 ADORA1P30542 326 aa17.67■□□□□ 0.42
LIMS2-209ENST00000410038 GYG1P46976 350 aa17.67■□□□□ 0.42
LIMS2-209ENST00000410038 DOK7Q18PE1 504 aa17.67■□□□□ 0.42
LIMS2-209ENST00000410038 ANKRD45Q5TZF3 282 aa17.67■□□□□ 0.42
LIMS2-209ENST00000410038 ZNF526Q8TF50 670 aaPredicted RBP17.67■□□□□ 0.42
LIMS2-209ENST00000410038 BCL11AQ9H165 835 aa17.67■□□□□ 0.42
LIMS2-209ENST00000410038 KDM2BQ8NHM5 1336 aa17.66■□□□□ 0.42
LIMS2-209ENST00000410038 B4GALNT3Q6L9W6 998 aa17.66■□□□□ 0.42
LIMS2-209ENST00000410038 AACSQ86V21 672 aa17.66■□□□□ 0.42
LIMS2-209ENST00000410038 XAGE2Q96GT9 111 aa17.66■□□□□ 0.42
LIMS2-209ENST00000410038 CCDC8Q9H0W5 538 aaPredicted RBP17.66■□□□□ 0.42
LIMS2-209ENST00000410038 TLR7Q9NYK1 1049 aaKnown RBP17.66■□□□□ 0.42
LIMS2-209ENST00000410038 RNF181Q9P0P0 153 aa17.66■□□□□ 0.42
LIMS2-209ENST00000410038 HIBADHP31937 336 aaKnown RBP17.65■□□□□ 0.42
LIMS2-209ENST00000410038 BCAMP50895 628 aa17.65■□□□□ 0.42
LIMS2-209ENST00000410038 CAVIN4Q5BKX8 364 aa17.65■□□□□ 0.42
LIMS2-209ENST00000410038 C9orf131Q5VYM1 1079 aa17.65■□□□□ 0.42
LIMS2-209ENST00000410038 FBXO33Q7Z6M2 555 aa17.65■□□□□ 0.42
LIMS2-209ENST00000410038 DBNDD2Q9BQY9 259 aa17.65■□□□□ 0.42
LIMS2-209ENST00000410038 DBNDD1Q9H9R9 158 aa17.65■□□□□ 0.42
LIMS2-209ENST00000410038 DBNLQ9UJU6 430 aaKnown RBP17.65■□□□□ 0.42
LIMS2-209ENST00000410038 PSME4Q14997 1843 aa17.65■□□□□ 0.42
LIMS2-209ENST00000410038 ZNF804AQ7Z570 1209 aa17.64■□□□□ 0.42
LIMS2-209ENST00000410038 JDP2Q8WYK2 163 aa17.64■□□□□ 0.42
LIMS2-209ENST00000410038 COA1Q9GZY4 146 aa17.64■□□□□ 0.42
LIMS2-209ENST00000410038 G3V3G9 751 aa17.64■□□□□ 0.41
LIMS2-209ENST00000410038 NUCB1Q02818 461 aa17.64■□□□□ 0.41
LIMS2-209ENST00000410038 DCAF8Q5TAQ9 597 aa17.64■□□□□ 0.41
LIMS2-209ENST00000410038 NIM1KQ8IY84 436 aa17.64■□□□□ 0.41
LIMS2-209ENST00000410038 CD209Q9NNX6 404 aa17.64■□□□□ 0.41
LIMS2-209ENST00000410038 ECE2O60344 883 aa17.63■□□□□ 0.41
LIMS2-209ENST00000410038 IFIT2P09913 472 aaKnown RBP17.63■□□□□ 0.41
LIMS2-209ENST00000410038 PHKA1P46020 1223 aa17.63■□□□□ 0.41
LIMS2-209ENST00000410038 CCDC102BQ68D86 513 aa17.63■□□□□ 0.41
LIMS2-209ENST00000410038 CENPQQ7L2Z9 268 aaPredicted RBP17.63■□□□□ 0.41
LIMS2-209ENST00000410038 VPS37DQ86XT2 251 aa17.63■□□□□ 0.41
LIMS2-209ENST00000410038 ZBTB47Q9UFB7 747 aaPredicted RBP17.63■□□□□ 0.41
LIMS2-209ENST00000410038 ZNF646O15015 1829 aaPredicted RBP17.63■□□□□ 0.41
LIMS2-209ENST00000410038 YDJCA8MPS7 323 aa17.62■□□□□ 0.41
LIMS2-209ENST00000410038 IL1R1P14778 569 aa17.62■□□□□ 0.41
LIMS2-209ENST00000410038 GORABQ5T7V8 394 aa17.62■□□□□ 0.41
LIMS2-209ENST00000410038 PODNQ7Z5L7 613 aa17.62■□□□□ 0.41
LIMS2-209ENST00000410038 CHD1LQ86WJ1 897 aa17.62■□□□□ 0.41
LIMS2-209ENST00000410038 C16orf71Q8IYS4 520 aaPredicted RBP17.62■□□□□ 0.41
LIMS2-209ENST00000410038 ZNRF3Q9ULT6 936 aa17.62■□□□□ 0.41
LIMS2-209ENST00000410038 AKAP11Q9UKA4 1901 aa17.62■□□□□ 0.41
LIMS2-209ENST00000410038 KIF3CO14782 793 aa17.61■□□□□ 0.41
LIMS2-209ENST00000410038 TDRD7Q8NHU6 1098 aaKnown RBP17.61■□□□□ 0.41
LIMS2-209ENST00000410038 LNPKQ9C0E8 428 aa17.61■□□□□ 0.41
LIMS2-209ENST00000410038 KCNQ5Q9NR82 932 aa17.61■□□□□ 0.41
LIMS2-209ENST00000410038 FZD9O00144 591 aa17.61■□□□□ 0.41
LIMS2-209ENST00000410038 IQSEC3Q9UPP2 1182 aaPredicted RBP17.61■□□□□ 0.41
LIMS2-209ENST00000410038 TOMM70O94826 608 aa17.6■□□□□ 0.41
LIMS2-209ENST00000410038 CCDC158Q5M9N0 1113 aa17.6■□□□□ 0.41
LIMS2-209ENST00000410038 OTUD7AQ8TE49 926 aaPredicted RBP17.6■□□□□ 0.41
LIMS2-209ENST00000410038 GNL3LQ9NVN8 582 aaKnown RBP17.59■□□□□ 0.41
LIMS2-209ENST00000410038 ARID4AP29374 1257 aaPredicted RBP17.58■□□□□ 0.41
LIMS2-209ENST00000410038 TTC39AQ5SRH9 613 aa17.58■□□□□ 0.41
LIMS2-209ENST00000410038 COL1A1P02452 1464 aaPredicted RBP17.58■□□□□ 0.41
LIMS2-209ENST00000410038 SALL3Q9BXA9 1300 aa17.58■□□□□ 0.4
LIMS2-209ENST00000410038 ZBTB22O15209 634 aa17.58■□□□□ 0.4
LIMS2-209ENST00000410038 FRAT2O75474 233 aaPredicted RBP17.58■□□□□ 0.4
LIMS2-209ENST00000410038 RAD17O75943 681 aa17.58■□□□□ 0.4
LIMS2-209ENST00000410038 EIF6P56537 245 aaKnown RBP17.58■□□□□ 0.4
LIMS2-209ENST00000410038 CXCL9Q07325 125 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms