RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 LRRC24Q50LG9 513 aa20.44■□□□□ 0.86
GCFC2-202ENST00000409857 HSP90AB4PQ58FF6 505 aa20.44■□□□□ 0.86
GCFC2-202ENST00000409857 SURF6O75683 361 aaKnown RBP20.43■□□□□ 0.86
GCFC2-202ENST00000409857 CHRNDQ07001 517 aa20.43■□□□□ 0.86
GCFC2-202ENST00000409857 G3BP1Q13283 466 aaKnown RBP eCLIP20.43■□□□□ 0.86
GCFC2-202ENST00000409857 DUOX1Q9NRD9 1551 aa20.43■□□□□ 0.86
GCFC2-202ENST00000409857 XDHP47989 1333 aa20.43■□□□□ 0.86
GCFC2-202ENST00000409857 C16orf71Q8IYS4 520 aaPredicted RBP20.43■□□□□ 0.86
GCFC2-202ENST00000409857 SIL1Q9H173 461 aa20.43■□□□□ 0.86
GCFC2-202ENST00000409857 DCTPP1Q9H773 170 aa20.42■□□□□ 0.86
GCFC2-202ENST00000409857 CDC45O75419 566 aa20.42■□□□□ 0.86
GCFC2-202ENST00000409857 YBX3P16989 372 aaKnown RBP eCLIP20.42■□□□□ 0.86
GCFC2-202ENST00000409857 GPSM2P81274 684 aa20.42■□□□□ 0.86
GCFC2-202ENST00000409857 MPNDQ8N594 471 aa20.42■□□□□ 0.86
GCFC2-202ENST00000409857 RTFDC1Q9BY42 306 aaPredicted RBP20.42■□□□□ 0.86
GCFC2-202ENST00000409857 WWC3Q9ULE0 1092 aa20.42■□□□□ 0.86
GCFC2-202ENST00000409857 ERC1Q8IUD2 1116 aa20.41■□□□□ 0.86
GCFC2-202ENST00000409857 PLEKHM2Q8IWE5 1019 aa20.41■□□□□ 0.86
GCFC2-202ENST00000409857 VGLL2Q8N8G2 317 aa20.41■□□□□ 0.86
GCFC2-202ENST00000409857 PSMD1Q99460 953 aa20.41■□□□□ 0.86
GCFC2-202ENST00000409857 LTBP3Q9NS15 1303 aa20.41■□□□□ 0.86
GCFC2-202ENST00000409857 RAB11FIP3O75154 756 aa20.41■□□□□ 0.86
GCFC2-202ENST00000409857 OLFM4Q6UX06 510 aa20.41■□□□□ 0.86
GCFC2-202ENST00000409857 ZNF219Q9P2Y4 722 aaPredicted RBP20.41■□□□□ 0.86
GCFC2-202ENST00000409857 ARAP2Q8WZ64 1704 aa20.4■□□□□ 0.86
GCFC2-202ENST00000409857 METTL24Q5JXM2 366 aa20.4■□□□□ 0.86
GCFC2-202ENST00000409857 LEMD3Q9Y2U8 911 aa20.4■□□□□ 0.86
GCFC2-202ENST00000409857 ATP2B4P23634 1241 aa20.4■□□□□ 0.86
GCFC2-202ENST00000409857 DPP8Q6V1X1 898 aaPredicted RBP20.4■□□□□ 0.86
GCFC2-202ENST00000409857 SLC51AQ86UW1 340 aa20.4■□□□□ 0.86
GCFC2-202ENST00000409857 ANKIB1Q9P2G1 1089 aa20.4■□□□□ 0.86
GCFC2-202ENST00000409857 NSFL1CQ9UNZ2 370 aaKnown RBP20.4■□□□□ 0.86
GCFC2-202ENST00000409857 ESPNB1AK53 854 aa20.39■□□□□ 0.85
GCFC2-202ENST00000409857 GRIN3BO60391 1043 aa20.39■□□□□ 0.85
GCFC2-202ENST00000409857 PDE8BO95263 885 aa20.39■□□□□ 0.85
GCFC2-202ENST00000409857 SUPT20HQ8NEM7 779 aa20.39■□□□□ 0.85
GCFC2-202ENST00000409857 CEP126Q9P2H0 1117 aa20.39■□□□□ 0.85
GCFC2-202ENST00000409857 ISY1Q9ULR0 285 aaKnown RBP20.39■□□□□ 0.85
GCFC2-202ENST00000409857 EXOC6BQ9Y2D4 811 aa20.39■□□□□ 0.85
GCFC2-202ENST00000409857 FKBP4Q02790 459 aaKnown RBP eCLIP20.38■□□□□ 0.85
GCFC2-202ENST00000409857 GPR162Q16538 588 aa20.38■□□□□ 0.85
GCFC2-202ENST00000409857 SKOR2Q2VWA4 1001 aaPredicted RBP20.38■□□□□ 0.85
GCFC2-202ENST00000409857 OTUD7AQ8TE49 926 aaPredicted RBP20.38■□□□□ 0.85
GCFC2-202ENST00000409857 SBF1O95248 1867 aa20.38■□□□□ 0.85
GCFC2-202ENST00000409857 SASH1O94885 1247 aa20.38■□□□□ 0.85
GCFC2-202ENST00000409857 OS9Q13438 667 aaPredicted RBP20.38■□□□□ 0.85
GCFC2-202ENST00000409857 VPS33BQ9H267 617 aa20.38■□□□□ 0.85
GCFC2-202ENST00000409857 GGA1Q9UJY5 639 aa20.38■□□□□ 0.85
GCFC2-202ENST00000409857 TBC1D16Q8TBP0 767 aa20.37■□□□□ 0.85
GCFC2-202ENST00000409857 AK9Q5TCS8 1911 aa20.37■□□□□ 0.85
GCFC2-202ENST00000409857 DICER1Q9UPY3 1922 aaKnown RBP20.37■□□□□ 0.85
GCFC2-202ENST00000409857 UBE4AQ14139 1066 aa20.37■□□□□ 0.85
GCFC2-202ENST00000409857 GPR108Q9NPR9 543 aa20.37■□□□□ 0.85
GCFC2-202ENST00000409857 CCDC88AQ3V6T2 1871 aa20.37■□□□□ 0.85
GCFC2-202ENST00000409857 TAOK3Q9H2K8 898 aa20.36■□□□□ 0.85
GCFC2-202ENST00000409857 ZNF804BA4D1E1 1349 aa20.36■□□□□ 0.85
GCFC2-202ENST00000409857 APBB1O00213 710 aa20.36■□□□□ 0.85
GCFC2-202ENST00000409857 NFKBIEO00221 500 aa20.36■□□□□ 0.85
GCFC2-202ENST00000409857 TAF5LO75529 589 aa20.36■□□□□ 0.85
GCFC2-202ENST00000409857 PUM3Q15397 648 aaKnown RBP20.36■□□□□ 0.85
GCFC2-202ENST00000409857 KIF1BPQ96EK5 621 aa20.36■□□□□ 0.85
GCFC2-202ENST00000409857 POLLQ9UGP5 575 aa20.36■□□□□ 0.85
GCFC2-202ENST00000409857 AKAP2Q9Y2D5 859 aa20.36■□□□□ 0.85
GCFC2-202ENST00000409857 TFCP2Q12800 502 aa20.35■□□□□ 0.85
GCFC2-202ENST00000409857 C15orf52Q6ZUT6 534 aaKnown RBP20.35■□□□□ 0.85
GCFC2-202ENST00000409857 HELBQ8NG08 1087 aaPredicted RBP20.35■□□□□ 0.85
GCFC2-202ENST00000409857 UFL1O94874 794 aa20.35■□□□□ 0.85
GCFC2-202ENST00000409857 BAG4O95429 457 aaKnown RBP20.35■□□□□ 0.85
GCFC2-202ENST00000409857 FGFR2P21802 821 aa20.35■□□□□ 0.85
GCFC2-202ENST00000409857 TTC22Q5TAA0 569 aa20.35■□□□□ 0.85
GCFC2-202ENST00000409857 TRIM44Q96DX7 344 aaPredicted RBP20.35■□□□□ 0.85
GCFC2-202ENST00000409857 EYA3Q99504 573 aa20.35■□□□□ 0.85
GCFC2-202ENST00000409857 MED23Q9ULK4 1368 aa20.35■□□□□ 0.85
GCFC2-202ENST00000409857 RHPN1Q8TCX5 695 aa20.34■□□□□ 0.85
GCFC2-202ENST00000409857 SMARCA5O60264 1052 aaPredicted RBP20.34■□□□□ 0.85
GCFC2-202ENST00000409857 KCNJ4P48050 445 aa20.34■□□□□ 0.85
GCFC2-202ENST00000409857 ARHGAP27Q6ZUM4 889 aa20.34■□□□□ 0.85
GCFC2-202ENST00000409857 PKNOX2Q96KN3 472 aa20.34■□□□□ 0.85
GCFC2-202ENST00000409857 ZNF609O15014 1411 aa20.34■□□□□ 0.85
GCFC2-202ENST00000409857 IRS2Q9Y4H2 1338 aa20.33■□□□□ 0.85
GCFC2-202ENST00000409857 DCAF8L1A6NGE4 600 aa20.33■□□□□ 0.85
GCFC2-202ENST00000409857 LPIN2Q92539 896 aa20.33■□□□□ 0.85
GCFC2-202ENST00000409857 DDX49Q9Y6V7 483 aaKnown RBP20.33■□□□□ 0.85
GCFC2-202ENST00000409857 C6orf229H3BNL8 230 aa20.33■□□□□ 0.84
GCFC2-202ENST00000409857 PKP1Q13835 747 aa20.33■□□□□ 0.84
GCFC2-202ENST00000409857 LRRCC1Q9C099 1032 aa20.33■□□□□ 0.84
GCFC2-202ENST00000409857 USP26Q9BXU7 913 aa20.32■□□□□ 0.84
GCFC2-202ENST00000409857 ATP2B3Q16720 1220 aa20.32■□□□□ 0.84
GCFC2-202ENST00000409857 SLC5A1P13866 664 aa20.31■□□□□ 0.84
GCFC2-202ENST00000409857 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.31■□□□□ 0.84
GCFC2-202ENST00000409857 GOLGB1Q14789 3259 aaKnown RBP20.31■□□□□ 0.84
GCFC2-202ENST00000409857 GOLGA6L22H0YM25 854 aa20.31■□□□□ 0.84
GCFC2-202ENST00000409857 IFIT1P09914 478 aaKnown RBP20.31■□□□□ 0.84
GCFC2-202ENST00000409857 PTMSP20962 102 aa20.31■□□□□ 0.84
GCFC2-202ENST00000409857 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
GCFC2-202ENST00000409857 RABEP1Q15276 862 aa20.31■□□□□ 0.84
GCFC2-202ENST00000409857 WASHC4Q2M389 1173 aa20.31■□□□□ 0.84
GCFC2-202ENST00000409857 TNNI3KQ59H18 835 aa20.31■□□□□ 0.84
GCFC2-202ENST00000409857 MCTP1Q6DN14 999 aa20.31■□□□□ 0.84
GCFC2-202ENST00000409857 FPGT-TNNI3KV9GXZ4 949 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms