RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 SPATA31A1Q5TZJ5 1347 aa9.07□□□□□ -0.96
CXCR4-202ENST00000409817 ATP5J2-PTCD1G3V325 749 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 FRAT2O75474 233 aaPredicted RBP9.06□□□□□ -0.96
CXCR4-202ENST00000409817 PIP4K2AP48426 406 aaPredicted RBP9.06□□□□□ -0.96
CXCR4-202ENST00000409817 PTPN12Q05209 780 aaKnown RBP9.06□□□□□ -0.96
CXCR4-202ENST00000409817 TCIRG1Q13488 830 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 EPHA10Q5JZY3 1008 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 PACS2Q86VP3 889 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 EAF2Q96CJ1 260 aaPredicted RBP9.06□□□□□ -0.96
CXCR4-202ENST00000409817 CWC22Q9HCG8 908 aaKnown RBP9.06□□□□□ -0.96
CXCR4-202ENST00000409817 GPR108Q9NPR9 543 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 RAD50Q92878 1312 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 RFX7Q2KHR2 1363 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 PTMSP20962 102 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 QPCTQ16769 361 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 KIAA1211Q6ZU35 1233 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 BANK1Q8NDB2 785 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 ZBED2Q9BTP6 218 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 DIAPH3Q9NSV4 1193 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 ASAP1Q9ULH1 1129 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 TJP1Q07157 1748 aa9.06□□□□□ -0.96
CXCR4-202ENST00000409817 SLIT2O94813 1529 aa9.05□□□□□ -0.96
CXCR4-202ENST00000409817 NDUFV2P19404 249 aa9.05□□□□□ -0.96
CXCR4-202ENST00000409817 HSPA4P34932 840 aa9.05□□□□□ -0.96
CXCR4-202ENST00000409817 FOXO4P98177 505 aa9.05□□□□□ -0.96
CXCR4-202ENST00000409817 DDB1Q16531 1140 aa9.05□□□□□ -0.96
CXCR4-202ENST00000409817 DNAJC10Q8IXB1 793 aa9.05□□□□□ -0.96
CXCR4-202ENST00000409817 PLA2G12BQ9BX93 195 aa9.05□□□□□ -0.96
CXCR4-202ENST00000409817 MAP3K15Q6ZN16 1313 aa9.05□□□□□ -0.96
CXCR4-202ENST00000409817 SNPHO15079 494 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 CIAO1O76071 339 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 CD2BP2O95400 341 aaKnown RBP9.04□□□□□ -0.96
CXCR4-202ENST00000409817 PCCAP05165 728 aaPredicted RBP9.04□□□□□ -0.96
CXCR4-202ENST00000409817 ATP5JP18859 108 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 IL15P40933 162 aaPredicted RBP9.04□□□□□ -0.96
CXCR4-202ENST00000409817 POTEEQ6S8J3 1075 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 LMBR1LQ6UX01 489 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 CCDC82Q8N4S0 544 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 ZBTB3Q9H5J0 574 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 CICQ96RK0 1608 aaPredicted RBP9.04□□□□□ -0.96
CXCR4-202ENST00000409817 SPATA31A5Q5VU36 1347 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 SPATA31A7Q8IWB4 1347 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 ERVV-1B6SEH8 477 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 CYP19A1P11511 503 aaPredicted RBP9.04□□□□□ -0.96
CXCR4-202ENST00000409817 DEKP35659 375 aaKnown RBP9.04□□□□□ -0.96
CXCR4-202ENST00000409817 IL6STP40189 918 aaPredicted RBP9.04□□□□□ -0.96
CXCR4-202ENST00000409817 NUCB2P80303 420 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 RAB3GAP1Q15042 981 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 TNNI3KQ59H18 835 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 MTMR14Q8NCE2 650 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 OTUD5Q96G74 571 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 GBP4Q96PP9 640 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 SIL1Q9H173 461 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 FPGT-TNNI3KV9GXZ4 949 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 CDHR2Q9BYE9 1310 aa9.04□□□□□ -0.96
CXCR4-202ENST00000409817 MCM4P33991 863 aa9.03□□□□□ -0.96
CXCR4-202ENST00000409817 PSEN2P49810 448 aa9.03□□□□□ -0.96
CXCR4-202ENST00000409817 ZBTB38Q8NAP3 1195 aaPredicted RBP9.03□□□□□ -0.96
CXCR4-202ENST00000409817 LSG1Q9H089 658 aaKnown RBP9.03□□□□□ -0.96
CXCR4-202ENST00000409817 KIAA1468Q9P260 1216 aa9.03□□□□□ -0.96
CXCR4-202ENST00000409817 DOT1LQ8TEK3 1739 aa9.03□□□□□ -0.96
CXCR4-202ENST00000409817 LILRB3O75022 631 aa9.02□□□□□ -0.96
CXCR4-202ENST00000409817 ADAMTS2O95450 1211 aa9.02□□□□□ -0.96
CXCR4-202ENST00000409817 GJA5P36382 358 aa9.02□□□□□ -0.96
CXCR4-202ENST00000409817 NEK4P51957 841 aa9.02□□□□□ -0.96
CXCR4-202ENST00000409817 TMEM259Q4ZIN3 620 aa9.02□□□□□ -0.96
CXCR4-202ENST00000409817 CWC27Q6UX04 472 aaKnown RBP9.02□□□□□ -0.96
CXCR4-202ENST00000409817 CLEC17AQ6ZS10 378 aa9.02□□□□□ -0.96
CXCR4-202ENST00000409817 INTS4Q96HW7 963 aaKnown RBP9.02□□□□□ -0.96
CXCR4-202ENST00000409817 CCDC8Q9H0W5 538 aaPredicted RBP9.02□□□□□ -0.96
CXCR4-202ENST00000409817 EYA2O00167 538 aa9.02□□□□□ -0.97
CXCR4-202ENST00000409817 MAP4K4O95819 1239 aaPredicted RBP9.02□□□□□ -0.97
CXCR4-202ENST00000409817 TFCP2Q12800 502 aa9.02□□□□□ -0.97
CXCR4-202ENST00000409817 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
CXCR4-202ENST00000409817 ANKRD36CQ5JPF3 1778 aa9.02□□□□□ -0.97
CXCR4-202ENST00000409817 KLHDC4Q8TBB5 520 aa9.02□□□□□ -0.97
CXCR4-202ENST00000409817 SMARCC1Q92922 1105 aaPredicted RBP9.02□□□□□ -0.97
CXCR4-202ENST00000409817 KCNB2Q92953 911 aa9.02□□□□□ -0.97
CXCR4-202ENST00000409817 DBNLQ9UJU6 430 aaKnown RBP9.02□□□□□ -0.97
CXCR4-202ENST00000409817 CSF1RP07333 972 aa9.01□□□□□ -0.97
CXCR4-202ENST00000409817 SLC10A3P09131 477 aa9.01□□□□□ -0.97
CXCR4-202ENST00000409817 CCDC57Q2TAC2 916 aa9.01□□□□□ -0.97
CXCR4-202ENST00000409817 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.01□□□□□ -0.97
CXCR4-202ENST00000409817 SYTL4Q96C24 671 aaPredicted RBP9.01□□□□□ -0.97
CXCR4-202ENST00000409817 TM6SF1Q9BZW5 370 aa9.01□□□□□ -0.97
CXCR4-202ENST00000409817 CHMP3Q9Y3E7 222 aa9.01□□□□□ -0.97
CXCR4-202ENST00000409817 ZNF831Q5JPB2 1677 aa9.01□□□□□ -0.97
CXCR4-202ENST00000409817 JCADQ9P266 1359 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 CCDC171Q6TFL3 1326 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 HSP90B1P14625 803 aaKnown RBP9□□□□□ -0.97
CXCR4-202ENST00000409817 CUL4AQ13619 759 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 ATG9AQ7Z3C6 839 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 JARID2Q92833 1246 aaPredicted RBP9□□□□□ -0.97
CXCR4-202ENST00000409817 SLC4A9Q96Q91 983 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 HAUS7Q99871 368 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 FSD1Q9BTV5 496 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 IL25Q9H293 177 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 BOLA2Q9H3K6 86 aa9□□□□□ -0.97
CXCR4-202ENST00000409817 TLR7Q9NYK1 1049 aaKnown RBP9□□□□□ -0.97
CXCR4-202ENST00000409817 PALD1Q9ULE6 856 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms