RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ALDH1L1O75891 902 aa18.07■□□□□ 0.48
LIMS2-205ENST00000409455 LINS1Q8NG48 757 aa18.07■□□□□ 0.48
LIMS2-205ENST00000409455 MAP4K1Q92918 833 aa18.07■□□□□ 0.48
LIMS2-205ENST00000409455 SLC27A2O14975 620 aa18.07■□□□□ 0.48
LIMS2-205ENST00000409455 CTAGE5O15320 804 aa18.07■□□□□ 0.48
LIMS2-205ENST00000409455 IFIT2P09913 472 aaKnown RBP18.07■□□□□ 0.48
LIMS2-205ENST00000409455 CCZ1BP86790 482 aa18.07■□□□□ 0.48
LIMS2-205ENST00000409455 CCZ1P86791 482 aaPredicted RBP18.07■□□□□ 0.48
LIMS2-205ENST00000409455 AEBP2Q6ZN18 517 aaPredicted RBP18.07■□□□□ 0.48
LIMS2-205ENST00000409455 ANKRD13DQ6ZTN6 518 aa18.07■□□□□ 0.48
LIMS2-205ENST00000409455 CFAP45Q9UL16 551 aa18.07■□□□□ 0.48
LIMS2-205ENST00000409455 NBPF26B4DH59 902 aa18.06■□□□□ 0.48
LIMS2-205ENST00000409455 BMS1Q14692 1282 aaKnown RBP18.06■□□□□ 0.48
LIMS2-205ENST00000409455 NBPF14Q5TI25 921 aa18.06■□□□□ 0.48
LIMS2-205ENST00000409455 NBPF10Q6P3W6 841 aaKnown RBP18.06■□□□□ 0.48
LIMS2-205ENST00000409455 C11orf57Q6ZUT1 292 aaPredicted RBP18.06■□□□□ 0.48
LIMS2-205ENST00000409455 NBPF15Q8N660 670 aa18.06■□□□□ 0.48
LIMS2-205ENST00000409455 KCND1Q9NSA2 647 aa18.06■□□□□ 0.48
LIMS2-205ENST00000409455 C9orf78Q9NZ63 289 aaPredicted RBP18.06■□□□□ 0.48
LIMS2-205ENST00000409455 CCDC9Q9Y3X0 531 aaKnown RBP18.06■□□□□ 0.48
LIMS2-205ENST00000409455 RPS6KB1P23443 525 aa18.06■□□□□ 0.48
LIMS2-205ENST00000409455 TCEANC2Q96MN5 208 aa18.06■□□□□ 0.48
LIMS2-205ENST00000409455 NOL10Q9BSC4 688 aaKnown RBP18.06■□□□□ 0.48
LIMS2-205ENST00000409455 THRAP3Q9Y2W1 955 aaKnown RBP18.06■□□□□ 0.48
LIMS2-205ENST00000409455 A1BGP04217 495 aa18.05■□□□□ 0.48
LIMS2-205ENST00000409455 IGKV5-2P06315 115 aa18.05■□□□□ 0.48
LIMS2-205ENST00000409455 GSDMDP57764 484 aa18.05■□□□□ 0.48
LIMS2-205ENST00000409455 STK3Q13188 491 aa18.05■□□□□ 0.48
LIMS2-205ENST00000409455 ATG3Q9NT62 314 aa18.05■□□□□ 0.48
LIMS2-205ENST00000409455 PLCH1Q4KWH8 1693 aa18.05■□□□□ 0.48
LIMS2-205ENST00000409455 KCPQ6ZWJ8 1503 aa18.05■□□□□ 0.48
LIMS2-205ENST00000409455 GLI3P10071 1580 aa18.05■□□□□ 0.48
LIMS2-205ENST00000409455 CDCA7Q9BWT1 371 aaPredicted RBP18.05■□□□□ 0.48
LIMS2-205ENST00000409455 ALDH8A1Q9H2A2 487 aaPredicted RBP18.05■□□□□ 0.48
LIMS2-205ENST00000409455 SPATA31A5Q5VU36 1347 aa18.05■□□□□ 0.48
LIMS2-205ENST00000409455 SPATA31A7Q8IWB4 1347 aa18.05■□□□□ 0.48
LIMS2-205ENST00000409455 H3BQV1 296 aa18.04■□□□□ 0.48
LIMS2-205ENST00000409455 DDB1Q16531 1140 aa18.04■□□□□ 0.48
LIMS2-205ENST00000409455 IFFO2Q5TF58 517 aa18.04■□□□□ 0.48
LIMS2-205ENST00000409455 ZNF446Q9NWS9 450 aa18.04■□□□□ 0.48
LIMS2-205ENST00000409455 TOGARAM1Q9Y4F4 1720 aa18.04■□□□□ 0.48
LIMS2-205ENST00000409455 TNS2Q63HR2 1409 aa18.04■□□□□ 0.48
LIMS2-205ENST00000409455 TOB2Q14106 344 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-205ENST00000409455 ERC1Q8IUD2 1116 aa18.04■□□□□ 0.48
LIMS2-205ENST00000409455 SYTL4Q96C24 671 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-205ENST00000409455 FAM227BQ96M60 508 aa18.04■□□□□ 0.48
LIMS2-205ENST00000409455 C8orf37Q96NL8 207 aa18.04■□□□□ 0.48
LIMS2-205ENST00000409455 METTL22Q9BUU2 404 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-205ENST00000409455 ZSCAN16Q9H4T2 348 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-205ENST00000409455 ST7Q9NRC1 585 aa18.04■□□□□ 0.48
LIMS2-205ENST00000409455 NPHP1O15259 732 aa18.03■□□□□ 0.48
LIMS2-205ENST00000409455 RESTQ13127 1097 aa18.03■□□□□ 0.48
LIMS2-205ENST00000409455 NMIQ13287 307 aaPredicted RBP18.03■□□□□ 0.48
LIMS2-205ENST00000409455 SNW1Q13573 536 aaKnown RBP18.03■□□□□ 0.48
LIMS2-205ENST00000409455 NGLY1Q96IV0 654 aa18.03■□□□□ 0.48
LIMS2-205ENST00000409455 MYD88Q99836 296 aa18.03■□□□□ 0.48
LIMS2-205ENST00000409455 SLIT2O94813 1529 aa18.03■□□□□ 0.48
LIMS2-205ENST00000409455 NEXNQ0ZGT2 675 aa18.03■□□□□ 0.48
LIMS2-205ENST00000409455 CERKQ8TCT0 537 aa18.03■□□□□ 0.48
LIMS2-205ENST00000409455 ANO10Q9NW15 660 aa18.03■□□□□ 0.48
LIMS2-205ENST00000409455 JCADQ9P266 1359 aa18.02■□□□□ 0.48
LIMS2-205ENST00000409455 GRM8O00222 908 aa18.02■□□□□ 0.48
LIMS2-205ENST00000409455 H2AFXP16104 143 aaPredicted RBP18.02■□□□□ 0.48
LIMS2-205ENST00000409455 DNAJC2Q99543 621 aaKnown RBP18.02■□□□□ 0.48
LIMS2-205ENST00000409455 COL9A3Q14050 684 aaPredicted RBP18.02■□□□□ 0.47
LIMS2-205ENST00000409455 CEP57L1Q8IYX8 460 aa18.02■□□□□ 0.47
LIMS2-205ENST00000409455 BRF1Q92994 677 aa18.02■□□□□ 0.47
LIMS2-205ENST00000409455 HMG20BQ9P0W2 317 aa18.02■□□□□ 0.47
LIMS2-205ENST00000409455 NEURL1BA8MQ27 555 aa18.01■□□□□ 0.47
LIMS2-205ENST00000409455 CCDC73Q6ZRK6 1079 aa18.01■□□□□ 0.47
LIMS2-205ENST00000409455 AACSQ86V21 672 aa18.01■□□□□ 0.47
LIMS2-205ENST00000409455 DHX40Q8IX18 779 aaKnown RBP18.01■□□□□ 0.47
LIMS2-205ENST00000409455 NAT10Q9H0A0 1025 aaKnown RBP18.01■□□□□ 0.47
LIMS2-205ENST00000409455 L2HGDHQ9H9P8 463 aa18.01■□□□□ 0.47
LIMS2-205ENST00000409455 UBR2Q8IWV8 1755 aa18.01■□□□□ 0.47
LIMS2-205ENST00000409455 KAT6BQ8WYB5 2073 aa18.01■□□□□ 0.47
LIMS2-205ENST00000409455 KINO60870 393 aaKnown RBP18.01■□□□□ 0.47
LIMS2-205ENST00000409455 CYP2C19P33261 490 aa18.01■□□□□ 0.47
LIMS2-205ENST00000409455 SLC20A2Q08357 652 aa18.01■□□□□ 0.47
LIMS2-205ENST00000409455 GTF3C6Q969F1 213 aa18.01■□□□□ 0.47
LIMS2-205ENST00000409455 SNRKQ9NRH2 765 aa18.01■□□□□ 0.47
LIMS2-205ENST00000409455 NRAPQ86VF7 1730 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 JAK2O60674 1132 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 MTX1Q13505 466 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 ERCC6LQ2NKX8 1250 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 CCAR1Q8IX12 1150 aaKnown RBP18■□□□□ 0.47
LIMS2-205ENST00000409455 IMPACTQ9P2X3 320 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 BCL9O00512 1426 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 VGLL3A8MV65 326 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 CEBPZQ03701 1054 aaKnown RBP18■□□□□ 0.47
LIMS2-205ENST00000409455 GCKRQ14397 625 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 BARGINQ6ZT62 677 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 TTLL7Q6ZT98 887 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 DNAJC10Q8IXB1 793 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 PLBD2Q8NHP8 589 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 PAPPAQ13219 1627 aa18■□□□□ 0.47
LIMS2-205ENST00000409455 UTYO14607 1347 aa17.99■□□□□ 0.47
LIMS2-205ENST00000409455 MARCH10Q8NA82 808 aaPredicted RBP17.99■□□□□ 0.47
LIMS2-205ENST00000409455 DDX11Q96FC9 970 aa17.99■□□□□ 0.47
LIMS2-205ENST00000409455 KAZALD1Q96I82 304 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms