RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 CCDC102AQ96A19 550 aa11.83□□□□□ -0.52
NIF3L1-203ENST00000409129 PODXL2Q9NZ53 605 aa11.83□□□□□ -0.52
NIF3L1-203ENST00000409129 HDAC9Q9UKV0 1011 aa11.83□□□□□ -0.52
NIF3L1-203ENST00000409129 ASTN2O75129 1339 aaPredicted RBP11.83□□□□□ -0.52
NIF3L1-203ENST00000409129 COL4A1P02462 1669 aa11.82□□□□□ -0.52
NIF3L1-203ENST00000409129 POTEFA5A3E0 1075 aa11.82□□□□□ -0.52
NIF3L1-203ENST00000409129 PDE8AO60658 829 aa11.82□□□□□ -0.52
NIF3L1-203ENST00000409129 DDX58O95786 925 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-203ENST00000409129 CCDC152Q4G0S7 254 aa11.82□□□□□ -0.52
NIF3L1-203ENST00000409129 CCDC30Q5VVM6 783 aa11.82□□□□□ -0.52
NIF3L1-203ENST00000409129 RASAL3Q86YV0 1011 aa11.82□□□□□ -0.52
NIF3L1-203ENST00000409129 C2orf69Q8N8R5 385 aa11.82□□□□□ -0.52
NIF3L1-203ENST00000409129 JARID2Q92833 1246 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-203ENST00000409129 METTL22Q9BUU2 404 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-203ENST00000409129 CWC25Q9NXE8 425 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-203ENST00000409129 ANKIB1Q9P2G1 1089 aa11.82□□□□□ -0.52
NIF3L1-203ENST00000409129 RTL9Q8NET4 1388 aa11.81□□□□□ -0.52
NIF3L1-203ENST00000409129 G3V3G9 751 aa11.81□□□□□ -0.52
NIF3L1-203ENST00000409129 UFL1O94874 794 aa11.81□□□□□ -0.52
NIF3L1-203ENST00000409129 VIL1P09327 827 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-203ENST00000409129 RBM26Q5T8P6 1007 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-203ENST00000409129 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
NIF3L1-203ENST00000409129 GGA1Q9UJY5 639 aa11.81□□□□□ -0.52
NIF3L1-203ENST00000409129 TSPYL6Q8N831 410 aa11.8□□□□□ -0.52
NIF3L1-203ENST00000409129 DCPSQ96C86 337 aaKnown RBP11.8□□□□□ -0.52
NIF3L1-203ENST00000409129 CCDC85AQ96PX6 553 aaPredicted RBP11.8□□□□□ -0.52
NIF3L1-203ENST00000409129 MAP3K2Q9Y2U5 619 aa11.8□□□□□ -0.52
NIF3L1-203ENST00000409129 PSME4Q14997 1843 aa11.8□□□□□ -0.52
NIF3L1-203ENST00000409129 COL6A3P12111 3177 aa11.8□□□□□ -0.52
NIF3L1-203ENST00000409129 CUL9Q8IWT3 2517 aa11.79□□□□□ -0.52
NIF3L1-203ENST00000409129 DLL1O00548 723 aa11.79□□□□□ -0.52
NIF3L1-203ENST00000409129 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
NIF3L1-203ENST00000409129 FBXO46Q6PJ61 603 aaPredicted RBP11.79□□□□□ -0.52
NIF3L1-203ENST00000409129 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
NIF3L1-203ENST00000409129 MOB2Q70IA6 237 aa11.79□□□□□ -0.52
NIF3L1-203ENST00000409129 ANKRD18AQ8IVF6 992 aa11.79□□□□□ -0.52
NIF3L1-203ENST00000409129 R3HDMLQ9H3Y0 253 aa11.79□□□□□ -0.52
NIF3L1-203ENST00000409129 SCAF8Q9UPN6 1271 aaKnown RBP11.79□□□□□ -0.52
NIF3L1-203ENST00000409129 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
NIF3L1-203ENST00000409129 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
NIF3L1-203ENST00000409129 IGKV5-2P06315 115 aa11.78□□□□□ -0.52
NIF3L1-203ENST00000409129 ATP2B4P23634 1241 aa11.78□□□□□ -0.52
NIF3L1-203ENST00000409129 KIF4BQ2VIQ3 1234 aa11.78□□□□□ -0.52
NIF3L1-203ENST00000409129 PI4KAP1Q8N8J0 262 aa11.78□□□□□ -0.52
NIF3L1-203ENST00000409129 SPDYE1Q8NFV5 336 aaPredicted RBP11.78□□□□□ -0.52
NIF3L1-203ENST00000409129 CDCA5Q96FF9 252 aa11.78□□□□□ -0.52
NIF3L1-203ENST00000409129 XDHP47989 1333 aa11.78□□□□□ -0.52
NIF3L1-203ENST00000409129 A0A0C4DFX4 3053 aa11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 CTSWP56202 376 aa11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 ZNF280AP59817 542 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 NEXNQ0ZGT2 675 aa11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 MKRN3Q13064 507 aaKnown RBP11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 CCDC27Q2M243 656 aa11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 CCDC184Q52MB2 194 aa11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 RSBN1LQ6PCB5 846 aaPredicted RBP11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 MIER1Q8N108 512 aa11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 AGBL3Q8NEM8 1001 aa11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 TTLL11Q8NHH1 800 aa11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 TSR2Q969E8 191 aaKnown RBP11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 CDC5LQ99459 802 aaKnown RBP11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 STK31Q9BXU1 1019 aa11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 GGA3Q9NZ52 723 aa11.77□□□□□ -0.53
NIF3L1-203ENST00000409129 GPR25O00155 361 aa11.76□□□□□ -0.53
NIF3L1-203ENST00000409129 FXR2P51116 673 aaKnown RBP eCLIP11.76□□□□□ -0.53
NIF3L1-203ENST00000409129 SCARF1Q14162 830 aa11.76□□□□□ -0.53
NIF3L1-203ENST00000409129 TWISTNBQ3B726 338 aaPredicted RBP11.76□□□□□ -0.53
NIF3L1-203ENST00000409129 PODNQ7Z5L7 613 aa11.76□□□□□ -0.53
NIF3L1-203ENST00000409129 SULF1Q8IWU6 871 aa11.76□□□□□ -0.53
NIF3L1-203ENST00000409129 WWC1Q8IX03 1113 aa11.76□□□□□ -0.53
NIF3L1-203ENST00000409129 PLCD3Q8N3E9 789 aa11.76□□□□□ -0.53
NIF3L1-203ENST00000409129 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
NIF3L1-203ENST00000409129 MINPP1Q9UNW1 487 aa11.76□□□□□ -0.53
NIF3L1-203ENST00000409129 USP17L3A6NCW0 530 aa11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 USP17L4A6NCW7 530 aa11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 WTIPA6NIX2 430 aaPredicted RBP11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 NEURL1BA8MQ27 555 aa11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 H7C1W4 665 aa11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 USP17L8P0C7I0 530 aa11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 CWF19L2Q2TBE0 894 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 G2E3Q7L622 706 aa11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 USP17L1Q7RTZ2 530 aa11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 GMLQ99445 158 aa11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 GREM2Q9H772 168 aa11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 RANBP2P49792 3224 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 ZNF609O15014 1411 aa11.75□□□□□ -0.53
NIF3L1-203ENST00000409129 LAMB1P07942 1786 aa11.74□□□□□ -0.53
NIF3L1-203ENST00000409129 ZNF646O15015 1829 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-203ENST00000409129 EN2P19622 333 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-203ENST00000409129 ANGEL2Q5VTE6 544 aaKnown RBP11.74□□□□□ -0.53
NIF3L1-203ENST00000409129 MYOZ2Q9NPC6 264 aa11.74□□□□□ -0.53
NIF3L1-203ENST00000409129 ZSWIM8A7E2V4 1837 aa11.74□□□□□ -0.53
NIF3L1-203ENST00000409129 UBE2Q2LH0YL09 131 aa11.73□□□□□ -0.53
NIF3L1-203ENST00000409129 PITPNM1O00562 1244 aa11.73□□□□□ -0.53
NIF3L1-203ENST00000409129 CCT4P50991 539 aaKnown RBP11.73□□□□□ -0.53
NIF3L1-203ENST00000409129 IL16Q14005 1332 aa11.73□□□□□ -0.53
NIF3L1-203ENST00000409129 PRAMEF18Q5VWM3 479 aa11.73□□□□□ -0.53
NIF3L1-203ENST00000409129 UBE3BQ7Z3V4 1068 aa11.73□□□□□ -0.53
NIF3L1-203ENST00000409129 MED23Q9ULK4 1368 aa11.73□□□□□ -0.53
NIF3L1-203ENST00000409129 PITPNM2Q9BZ72 1349 aa11.72□□□□□ -0.53
NIF3L1-203ENST00000409129 FKTNO75072 461 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms